Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002443A_C01 KCC002443A_c01
(485 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00091194.1| COG4656: Predicted NADH:ubiquinone oxidoreduc... 43 0.002
ref|ZP_00059112.1| COG4987: ABC-type transport system involved i... 42 0.003
ref|ZP_00092593.1| COG0469: Pyruvate kinase [Azotobacter vinelan... 42 0.003
pir||T45143 hypothetical protein ORFY [imported] - Methylococcus... 42 0.005
ref|XP_287554.1| hypothetical protein XP_287554 [Mus musculus] 41 0.009
>ref|ZP_00091194.1| COG4656: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC
[Azotobacter vinelandii]
Length = 632
Score = 43.1 bits (100), Expect = 0.002
Identities = 36/95 (37%), Positives = 42/95 (43%), Gaps = 5/95 (5%)
Frame = +3
Query: 171 ASAGGGILVARRHP-----PRRNRAARYRAARYLGGPRLALGLRHPTRRPGCTPRRALGR 335
A AGGG+ V R HP P R R RA GPR A G H R+ PRR GR
Sbjct: 55 AGAGGGLAVHRLHPLLPCLPHRRHRRRQRA-----GPRGAGGCLHRLRQ---VPRRLSGR 106
Query: 336 LSPQPPSAWPLRAAAAAAVARPPLPPSGRSRCRMA 440
L P P A A P G++RCR++
Sbjct: 107 LRPSDP-----------AGADPGHLALGQARCRLS 130
>ref|ZP_00059112.1| COG4987: ABC-type transport system involved in cytochrome bd
biosynthesis, fused ATPase and permease components
[Thermobifida fusca]
Length = 982
Score = 42.4 bits (98), Expect = 0.003
Identities = 35/87 (40%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Frame = +3
Query: 201 RRHPPRRNRAARYRAARYLGGP-------RLALGLRHPTRRPGCTPRRA---LGRLSPQP 350
R HP R+ R R R+A G LA+GLRHP RR P R RL P+
Sbjct: 265 REHPARQTRGERRRSAARRGTRGSTRLHLHLAVGLRHPARRAWHAPVRGTTPADRLGPRF 324
Query: 351 PSAWPLRAAAAAAVARPPLPPSGRSRC 431
P+ RAA A RPP P G RC
Sbjct: 325 PARRADRAAGRA--HRPPRP--GPCRC 347
>ref|ZP_00092593.1| COG0469: Pyruvate kinase [Azotobacter vinelandii]
Length = 706
Score = 42.4 bits (98), Expect = 0.003
Identities = 35/78 (44%), Positives = 38/78 (47%), Gaps = 11/78 (14%)
Frame = -2
Query: 373 ARSGH-AEGGCGDRRPSARRGVQPGLRVGC-RNPRAKRGPP------R*RAARYRAARLR 218
ARSGH A+G C RR A G P LR R+PRA RG P R RA R A R R
Sbjct: 14 ARSGHPADGRCSGRRRPAYPGGHPALRARPDRHPRAARGAPGALRRRRHRARRKHAGRRR 73
Query: 217 RGG---WRRATSMPPPAE 173
GG R + P AE
Sbjct: 74 GGGRAVHRHSRQYPRTAE 91
>pir||T45143 hypothetical protein ORFY [imported] - Methylococcus capsulatus
gi|3164083|emb|CAA71099.1| ORFY [Methylococcus
capsulatus]
Length = 327
Score = 41.6 bits (96), Expect = 0.005
Identities = 39/121 (32%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Frame = -1
Query: 476 ARVPGWRGRRPIGHPAPAPSTWR-QRGP-RHCCCCCGPQRPRRRRLRRQTAERAAWRAAR 303
A P R R P PAP PSTW+ +R P RH GP PR RR R AR
Sbjct: 2 AAKPNGRWRPP---PAPKPSTWKAERDPYRHGTGIAGPGDPRHRRRCGDGDSPQRARRAR 58
Query: 302 PACRVP*SQS*ARTSKVTCSAIPRSTIAPRWVASRNKYASARRGQPKPANSPASTSSQMR 123
PA R P +++ + T + S +AP + + R P A S + M
Sbjct: 59 PAWRHPAAETGLQPGAAT---VGHSRLAPLGHGFQGGISDPSRNGPPLARSRKILTQAMS 115
Query: 122 K 120
K
Sbjct: 116 K 116
>ref|XP_287554.1| hypothetical protein XP_287554 [Mus musculus]
Length = 122
Score = 40.8 bits (94), Expect = 0.009
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +3
Query: 210 PPRRNRAARYRAARYLGGPRLALGLRHPTRRPGCTPRRALGRLSPQPPSAWPLRAAAAAA 389
PP+ + + R+ P+ GL P R P R +G +P PPS WP +A
Sbjct: 15 PPKGQGSQEFTVPRHPRRPQPRRGLCLPLRPPTKLGARTVGPPAPAPPSPWPSTGSARPR 74
Query: 390 VARPPLPPSGRSRCRM 437
A P P G + R+
Sbjct: 75 PAHSPAPAPGWAHRRL 90
