Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002435A_C01 KCC002435A_c01
(557 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T51503 valine-tRNA ligase-like protein - Arabidopsis thalia... 52 2e-12
ref|NP_568337.2| valine--tRNA ligase-related protein [Arabidopsi... 52 4e-12
dbj|BAC83606.1| putative valyl-tRNA synthetase [Oryza sativa (ja... 50 5e-12
ref|NP_898485.1| valyl-tRNA synthetase [Synechococcus sp. WH 810... 43 3e-07
ref|NP_349014.1| Valyl-tRNA synthetase [Clostridium acetobutylic... 37 3e-06
>pir||T51503 valine-tRNA ligase-like protein - Arabidopsis thaliana
gi|9755723|emb|CAC01835.1| valine--tRNA ligase-like
protein [Arabidopsis thaliana]
Length = 1093
Score = 52.4 bits (124), Expect(2) = 2e-12
Identities = 30/72 (41%), Positives = 37/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 278 GANAGS--WLQCKAAATSGRRGLAPALKAAAVQEVGTVAGASTRPELPKNFELGAEERLY 451
G N G WL+ K G R LK + V T PE K F+ +EE++Y
Sbjct: 238 GGNRGCNCWLETKGY---GLRDFDVDLKLPSAASGNNVF---TSPETSKTFDFSSEEKIY 291
Query: 452 KWWESQGYFKPD 487
KWWESQGYFKP+
Sbjct: 292 KWWESQGYFKPN 303
Score = 40.8 bits (94), Expect(2) = 2e-12
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 501 GEPFTIPMPPPNVTGKLHM 557
G PF IPMPPPNVTG LHM
Sbjct: 308 GSPFVIPMPPPNVTGSLHM 326
>ref|NP_568337.2| valine--tRNA ligase-related protein [Arabidopsis thaliana]
Length = 890
Score = 51.6 bits (122), Expect(2) = 4e-12
Identities = 19/30 (63%), Positives = 24/30 (79%)
Frame = +2
Query: 398 TRPELPKNFELGAEERLYKWWESQGYFKPD 487
T PE K F+ +EE++YKWWESQGYFKP+
Sbjct: 65 TSPETSKTFDFSSEEKIYKWWESQGYFKPN 94
Score = 40.8 bits (94), Expect(2) = 4e-12
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 501 GEPFTIPMPPPNVTGKLHM 557
G PF IPMPPPNVTG LHM
Sbjct: 99 GSPFVIPMPPPNVTGSLHM 117
>dbj|BAC83606.1| putative valyl-tRNA synthetase [Oryza sativa (japonica
cultivar-group)]
Length = 945
Score = 50.4 bits (119), Expect(2) = 5e-12
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +2
Query: 398 TRPELPKNFELGAEERLYKWWESQGYFKPD 487
T PE+ K+F+ EER+YKWWESQG+FKP+
Sbjct: 50 TSPEVAKSFDFTNEERIYKWWESQGFFKPN 79
Score = 41.6 bits (96), Expect(2) = 5e-12
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 501 GEPFTIPMPPPNVTGKLHM 557
G+PF IPMPPPNVTG LHM
Sbjct: 84 GDPFVIPMPPPNVTGSLHM 102
>ref|NP_898485.1| valyl-tRNA synthetase [Synechococcus sp. WH 8102]
gi|33639527|emb|CAE08911.1| valyl-tRNA synthetase
[Synechococcus sp. WH 8102]
Length = 914
Score = 42.7 bits (99), Expect(2) = 3e-07
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +3
Query: 483 PIPHATGEPFTIPMPPPNVTGKLHM 557
P P A GEPF++ +PPPNVTG LHM
Sbjct: 29 PDPKAPGEPFSVVIPPPNVTGSLHM 53
Score = 33.1 bits (74), Expect(2) = 3e-07
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 404 PELPKNFE-LGAEERLYKWWESQGYFKPDP 490
PEL K ++ +G E R + WE QG F PDP
Sbjct: 2 PELAKTYDPVGTEARWQQAWEDQGAFHPDP 31
>ref|NP_349014.1| Valyl-tRNA synthetase [Clostridium acetobutylicum]
gi|25293105|pir||G97195 valyl-tRNA synthetase [imported]
- Clostridium acetobutylicum
gi|15025413|gb|AAK80354.1|AE007740_1 Valyl-tRNA
synthetase [Clostridium acetobutylicum]
Length = 881
Score = 36.6 bits (83), Expect(2) = 3e-06
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 504 EPFTIPMPPPNVTGKLHM 557
+P+TI MPPPN+TGKLH+
Sbjct: 39 KPYTIMMPPPNITGKLHL 56
Score = 35.8 bits (81), Expect(2) = 3e-06
Identities = 13/31 (41%), Positives = 21/31 (66%)
Frame = +2
Query: 413 PKNFELGAEERLYKWWESQGYFKPDPARHRR 505
PK FE +R+YKWWE +G+F P ++++
Sbjct: 13 PKEFE----DRIYKWWEEEGFFTPKVDKNKK 39
