>KCC002434A_C01 KCC002434A_c01
ATTATCTGGAACGGCAGACGGCATCCGGCCAAGAGCACGGCCAGGAGGAAGGGTTTTCCG
GGGCCCGAGCCTTTTTGCCATCTGAATTACTTTACCCACTTAGTAGCACGGATTCAGACT
GATGTGCGTACAGCCGGCAGAGAAGCCGCAGCGGTGAGAACGCTGGGCAAGGCCAGCCAG
CCTGTTGGCCTGGGCAAGCGGCCTGTTGAGCGGTAGCGGTCTTTGGACTGCCTGAGGATG
TGGAAGCTGCTGGGCAAGCTTCTACTGCTTGGCGCCGCGCGGCGCTGGGCTAAGCGACCC
ACGGCTGCTGTGGAGACAGCGGCGCTGGTGCTGGTGTTAAATGAGCGGCGCGTGGGCCGG
GGCGCCAAGCGGGATGTGTTGTTGAGAGCAGCACACATTATCTTCCTGCCCGCTGCTGTC
ATCAAGACGGTGCGGTTGATTAAGCGGCTAGCGGACAGCGG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002434A_C01 KCC002434A_c01
         (461 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_601191.1| translation initiation factor 2 [Corynebacteriu...    40  0.010
ref|NP_787974.1| CG33196-PB [Drosophila melanogaster] gi|2838026...    39  0.022
ref|XP_304754.1| hypothetical protein XP_304754 [Homo sapiens]         37  0.082
ref|ZP_00010764.1| COG2200: FOG: EAL domain [Rhodopseudomonas pa...    37  0.11
ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca]      37  0.14

>ref|NP_601191.1| translation initiation factor 2 [Corynebacterium glutamicum ATCC
           13032] gi|21324755|dbj|BAB99378.1| Translation
           initiation factor 2 (GTPase) [Corynebacterium glutamicum
           ATCC 13032]
          Length = 1004

 Score = 40.4 bits (93), Expect = 0.010
 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -2

Query: 364 RPGPRAAHLTPA--PAPLSPQQPWVA*PSAARRQAVEACPAASTSSGSPKTATAQQAACP 191
           +PG  A    PA  PAP +P     A P AA +  V+A PAA+   G+P    A  A   
Sbjct: 82  KPGAPAKPAAPAAKPAPAAPSAASAAKPGAAPKPGVQAKPAAAAKPGAPAKPAAPAAPSA 141

Query: 190 GQQAGWPCPA 161
            +    P PA
Sbjct: 142 AKSGSAPKPA 151

 Score = 35.8 bits (81), Expect = 0.24
 Identities = 24/73 (32%), Positives = 32/73 (42%), Gaps = 7/73 (9%)
 Frame = -2

Query: 373 PAWRPGPRAAHLTPAPAPLSPQQPWV-------A*PSAARRQAVEACPAASTSSGSPKTA 215
           PA +P P A     A  P +  +P V       A P A  + A  A P+A+ S  +PK A
Sbjct: 92  PAAKPAPAAPSAASAAKPGAAPKPGVQAKPAAAAKPGAPAKPAAPAAPSAAKSGSAPKPA 151

Query: 214 TAQQAACPGQQAG 176
            A + A  G   G
Sbjct: 152 AAAKPAFSGPTPG 164

>ref|NP_787974.1| CG33196-PB [Drosophila melanogaster]
             gi|28380266|gb|AAN10358.2|AE003576_45 CG33196-PB
             [Drosophila melanogaster]
          Length = 23054

 Score = 39.3 bits (90), Expect = 0.022
 Identities = 42/145 (28%), Positives = 54/145 (36%), Gaps = 19/145 (13%)
 Frame = -2

Query: 382   TTHPAWRPGPRAAHLTPAPAPLSPQQPWVA*PSAARRQAVEA--CPAASTSSGSPKTATA 209
             T +P  R  P+        AP+ P +P    P +  R   EA  C    T  G P     
Sbjct: 13385 TGNPFIRCQPQIEPPVRDVAPVDPCRPSPCGPYSQCRPVGEAPACSCVETYIGRPPNCRP 13444

Query: 208   Q---------QAACPGQQAGWPCPAFSPLRLLCRLYAHQSESVLLSG*SNSDG----KKA 68
             +         Q AC  Q+   PCP    L   C + +H  + +   G  N D     K  
Sbjct: 13445 ECVTSSDCSSQLACVNQKCVDPCPGRCGLNAECFVVSHAVQCICQQG-FNGDPFVQCKPE 13503

Query: 67    RAPENPSSWPCS----WPDAVCRSR 5
              A EN    PCS     P+AVCR R
Sbjct: 13504 IAYENEIRTPCSPSPCGPNAVCRDR 13528

 Score = 31.6 bits (70), Expect = 4.5
 Identities = 23/80 (28%), Positives = 33/80 (40%), Gaps = 11/80 (13%)
 Frame = -2

Query: 328   PAPLSPQQPWVA*PSAARRQ----AVEAC-------PAASTSSGSPKTATAQQAACPGQQ 182
             PAP+ P +P    P +  R+    AV +C       P A     S  +  AQ  AC  Q+
Sbjct: 10698 PAPVEPCRPSPCGPYSQCREVNGHAVCSCVTNYIGTPPACRPECSVSSECAQDRACVNQR 10757

Query: 181   AGWPCPAFSPLRLLCRLYAH 122
                PCP       +C++  H
Sbjct: 10758 CADPCPGTCGNEAICKVTNH 10777

>ref|XP_304754.1| hypothetical protein XP_304754 [Homo sapiens]
          Length = 184

 Score = 37.4 bits (85), Expect = 0.082
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = -2

Query: 286 SAARRQAVEACPAASTSSGSPKTATAQQAACPGQQAGWPCPAFSPLRLLCRLYAHQSESV 107
           +A  R+++ A  AA+  +G+P     ++ A PG+ AG+ CPA                  
Sbjct: 105 AALARRSLAAASAAAAEAGTPTWVAGRRRASPGKAAGYECPA------------------ 146

Query: 106 LLSG*SNSDGKKARAPENPSS-WPCSWPD 23
              G   S+G  AR  + P   WP S  D
Sbjct: 147 ---GQDTSEGDAARPGQPPRPLWPISTAD 172

>ref|ZP_00010764.1| COG2200: FOG: EAL domain [Rhodopseudomonas palustris]
          Length = 521

 Score = 37.0 bits (84), Expect = 0.11
 Identities = 22/51 (43%), Positives = 26/51 (50%)
 Frame = -2

Query: 340 LTPAPAPLSPQQPWVA*PSAARRQAVEACPAASTSSGSPKTATAQQAACPG 188
           + PAPA  +   P VA P AA   A+ A PAA T S  P  A A  +A  G
Sbjct: 187 VAPAPAASTVAAPTVATPEAAAVPALAAAPAAVTVSAGPNLAAAVASAVDG 237

>ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca]
          Length = 754

 Score = 36.6 bits (83), Expect = 0.14
 Identities = 26/79 (32%), Positives = 34/79 (42%), Gaps = 1/79 (1%)
 Frame = -2

Query: 397 CVLLSTTHPAWRPGPRAAHLTPAPAPLSPQQPWVA*PSAARRQAVEACPAA-STSSGSPK 221
           C   +   P   P P AA  T +P P SP   W A PS+    A    P+  S++  SP 
Sbjct: 216 CPTSTANAPPTCPTPPAAS-TASPEPTSPPPTWPA-PSSKACSAASLTPSTPSSTKVSPS 273

Query: 220 TATAQQAACPGQQAGWPCP 164
           T ++  AA P      P P
Sbjct: 274 TVSSSSAAAPAPPQSAPSP 292

EST assemble image

clone accession position 1 LCL027b02_r AV627460 1 472 2 LCL071h10_r AV630045 12 250 3 HCL034b09_r AV641470 17 294 4 HCL089g11_r AV644514 17 387

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