Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002431A_C01 KCC002431A_c01
(363 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB85091.1| unnamed protein product [Homo sapiens] 40 0.006
gb|AAF21439.1|AF201422_1 splicing coactivator subunit SRm300 [Ho... 40 0.011
dbj|BAA20782.2| KIAA0324 protein [Homo sapiens] 40 0.011
dbj|BAA83717.1| RNA binding protein [Homo sapiens] 40 0.011
pir||T02345 hypothetical protein KIAA0324 - human (fragment) gi|... 40 0.011
>dbj|BAB85091.1| unnamed protein product [Homo sapiens]
Length = 178
Score = 40.4 bits (93), Expect = 0.006
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 6 ASPRRSWATSTPKPPTTS-PCCAFPTPRDLSPPMCLLLRRSSAACASSPTRRPAR*RWRS 182
A PRRSW +++P P T S PCC + PR R S+AA A++ + P R R+
Sbjct: 36 AGPRRSWRSTSPLPGTASAPCCPWRAPR---------WRHSTAATATTCSSSPGA-RGRA 85
Query: 183 RTSSDRRGPPAPLSA 227
R +S P +P S+
Sbjct: 86 RPTSS--APSSPRSS 98
>gb|AAF21439.1|AF201422_1 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2296
Score = 39.7 bits (91), Expect = 0.011
Identities = 41/136 (30%), Positives = 55/136 (40%), Gaps = 16/136 (11%)
Frame = +3
Query: 3 SASPRRSWATSTPKPPTTSPCCAFPTP----------RDLSPPMCLLLRRSSAACASSPT 152
S S RR + S+P+ TTS P+P R RR + + S +
Sbjct: 1739 SRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTS 1798
Query: 153 RRPAR*RWRSRTSSDRRGPPAPLSAGPARFSTT*AAA------PLVPSACKPRRRWRTFS 314
RR R R RSR + RRG S PAR ++ ++ P + R R RT
Sbjct: 1799 RRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSP 1858
Query: 315 APLMLRMASRPSSTSH 362
AP R SR S +H
Sbjct: 1859 AP-WKRSRSRASPATH 1873
>dbj|BAA20782.2| KIAA0324 protein [Homo sapiens]
Length = 1783
Score = 39.7 bits (91), Expect = 0.011
Identities = 41/136 (30%), Positives = 55/136 (40%), Gaps = 16/136 (11%)
Frame = +3
Query: 3 SASPRRSWATSTPKPPTTSPCCAFPTP----------RDLSPPMCLLLRRSSAACASSPT 152
S S RR + S+P+ TTS P+P R RR + + S +
Sbjct: 770 SRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTS 829
Query: 153 RRPAR*RWRSRTSSDRRGPPAPLSAGPARFSTT*AAA------PLVPSACKPRRRWRTFS 314
RR R R RSR + RRG S PAR ++ ++ P + R R RT
Sbjct: 830 RRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSP 889
Query: 315 APLMLRMASRPSSTSH 362
AP R SR S +H
Sbjct: 890 AP-WKRSRSRASPATH 904
>dbj|BAA83717.1| RNA binding protein [Homo sapiens]
Length = 1275
Score = 39.7 bits (91), Expect = 0.011
Identities = 41/136 (30%), Positives = 55/136 (40%), Gaps = 16/136 (11%)
Frame = +3
Query: 3 SASPRRSWATSTPKPPTTSPCCAFPTP----------RDLSPPMCLLLRRSSAACASSPT 152
S S RR + S+P+ TTS P+P R RR + + S +
Sbjct: 262 SRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTS 321
Query: 153 RRPAR*RWRSRTSSDRRGPPAPLSAGPARFSTT*AAA------PLVPSACKPRRRWRTFS 314
RR R R RSR + RRG S PAR ++ ++ P + R R RT
Sbjct: 322 RRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSP 381
Query: 315 APLMLRMASRPSSTSH 362
AP R SR S +H
Sbjct: 382 AP-WKRSRSRASPATH 396
>pir||T02345 hypothetical protein KIAA0324 - human (fragment)
gi|2996650|gb|AAC08453.1| KIAA0324 [Homo sapiens]
Length = 1791
Score = 39.7 bits (91), Expect = 0.011
Identities = 41/136 (30%), Positives = 55/136 (40%), Gaps = 16/136 (11%)
Frame = +3
Query: 3 SASPRRSWATSTPKPPTTSPCCAFPTP----------RDLSPPMCLLLRRSSAACASSPT 152
S S RR + S+P+ TTS P+P R RR + + S +
Sbjct: 771 SRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTS 830
Query: 153 RRPAR*RWRSRTSSDRRGPPAPLSAGPARFSTT*AAA------PLVPSACKPRRRWRTFS 314
RR R R RSR + RRG S PAR ++ ++ P + R R RT
Sbjct: 831 RRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSP 890
Query: 315 APLMLRMASRPSSTSH 362
AP R SR S +H
Sbjct: 891 AP-WKRSRSRASPATH 905
