Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002429A_C02 KCC002429A_c02
(813 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_902841.1| conserved hypothetical protein [Chromobacterium... 54 4e-06
ref|XP_208618.1| hypothetical protein XP_208618 [Homo sapiens] 50 3e-05
gb|AAP50621.1| rh95 [Rhesus cytomegalovirus strain 68-1] 50 3e-05
ref|NP_900451.1| hypothetical protein CV0781 [Chromobacterium vi... 50 4e-05
ref|NP_626836.1| conserved hypothetical protein SCC88.10c [Strep... 46 6e-04
>ref|NP_902841.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472] gi|34104480|gb|AAQ60838.1| conserved hypothetical
protein [Chromobacterium violaceum ATCC 12472]
Length = 220
Score = 53.5 bits (127), Expect = 4e-06
Identities = 58/176 (32%), Positives = 69/176 (38%), Gaps = 5/176 (2%)
Frame = -2
Query: 551 GVALQRTRHPGWSAEGVRCRATPSACWGCWRAPRLIGLSSGRRCHTRPPPQLCKRPSGRC 372
G A TR PG G CRA + A L+ + GRR R RPSGRC
Sbjct: 38 GPAWTATRIPGRRRRGSGCRAAAARRPAGDAAAALLPAAGGRRRAARGLSGRRSRPSGRC 97
Query: 371 RCTAARSAWRGRSTRPCTRCRLPRPARPGSDSCPATSGQAAATGQWPAGPAAPRRGRCW- 195
W+ S R RCR P+P R S + G+ A P P R W
Sbjct: 98 --------WQIPSAR-ARRCRHPQPGRRACRSVALPASIPGRRGKRCASPGKPVRRPAWR 148
Query: 194 --GPPPASFASPASKYATSGANEAGRREPG-RADVACPAAP*LCTAAIKTS-RRGS 39
PPA PA + A SG A R P R CP A +A + S RRG+
Sbjct: 149 GSRRPPA----PACRRAASGNRPAVARFPAPRPRPGCPPAGWPRSAPARPSCRRGT 200
>ref|XP_208618.1| hypothetical protein XP_208618 [Homo sapiens]
Length = 244
Score = 50.4 bits (119), Expect = 3e-05
Identities = 52/163 (31%), Positives = 60/163 (35%), Gaps = 1/163 (0%)
Frame = -2
Query: 518 WSAEGVRCRATPSACWGCWRAPRLIGLSSGRRCHTRPPPQLCKRPSGRCRCTAARSAWRG 339
WS G R C C RA S GR+ T P + +RP RC A R
Sbjct: 48 WSGAGERSAGQGPTCPRCARAA-----SRGRQRTTSGPRRSPRRP----RCPAPR----- 93
Query: 338 RSTRPCTRCRLPRPARPGS-DSCPATSGQAAATGQWPAGPAAPRRGRCWGPPPASFASPA 162
R+ P R P P R S P QA G WPA PAAP+ P A A P
Sbjct: 94 RADPPSPRSDAPAPPRGRSLRVLPLPQVQAEPPGPWPALPAAPKP---LASPEAGMAGPG 150
Query: 161 SKYATSGANEAGRREPGRADVACPAAP*LCTAAIKTSRRGSSG 33
+ TS G R + P TA +RRG G
Sbjct: 151 GRRTTSLPKRRGCGSCWRGEAHSPR-----TARTGRTRRGRPG 188
>gb|AAP50621.1| rh95 [Rhesus cytomegalovirus strain 68-1]
Length = 233
Score = 50.4 bits (119), Expect = 3e-05
Identities = 42/146 (28%), Positives = 56/146 (37%), Gaps = 3/146 (2%)
Frame = -2
Query: 533 TRHPG---WSAEGVRCRATPSACWGCWRAPRLIGLSSGRRCHTRPPPQLCKRPSGRCRCT 363
+RHPG +SA C A +AC P L+G S + P+ R
Sbjct: 22 SRHPGTGGFSAASRSCSA--AACPDPALRPGLVGAS--------------RLPTRRRSAR 65
Query: 362 AARSAWRGRSTRPCTRCRLPRPARPGSDSCPATSGQAAATGQWPAGPAAPRRGRCWGPPP 183
AAR+ W RP R P+ A P + +G A W AG P R + PP
Sbjct: 66 AARTTWSRNRGRPSAAVRAPQGAYPANPGTAQLAGGGVARPSWGAGARFPGRSQASVPPS 125
Query: 182 ASFASPASKYATSGANEAGRREPGRA 105
+ A P ++ A E P RA
Sbjct: 126 RAHAPPPARAARPLPGERAWLRPQRA 151
>ref|NP_900451.1| hypothetical protein CV0781 [Chromobacterium violaceum ATCC 12472]
gi|34102090|gb|AAQ58457.1| hypothetical protein CV0781
[Chromobacterium violaceum ATCC 12472]
Length = 410
Score = 50.1 bits (118), Expect = 4e-05
Identities = 44/152 (28%), Positives = 60/152 (38%), Gaps = 4/152 (2%)
Frame = +3
Query: 96 SYISAARFPPARLVGPRRRVLRCRRSEARWWWTPAPAASRSSGTCWPLPSRRGLP*SGRA 275
S+ A+ PPA P +VL S R+ W A R + T WP R P
Sbjct: 6 SWRGASPMPPAISPMPSWQVLT---SCGRYTWNRAMTIIRLAATAWPAARRSNWP----- 57
Query: 276 TVATRAGRPGQTAACTWTGGPATPS*ARRCATAPA*RALTQLWWWSSMAASTRAQSYQPW 455
P +A+C W G + + + ATA R W+S+AA+ RA W
Sbjct: 58 ----TPISPASSASCAWRAGASRRAASCAAATAGCGRR------WTSLAATARASWRYGW 107
Query: 456 SPPATPASGWCG----ATANSFCGPSRMAGSL 539
A+GW G + CGP R G+L
Sbjct: 108 H----GAAGWTGNGGSRPVSGRCGPRRQRGAL 135
>ref|NP_626836.1| conserved hypothetical protein SCC88.10c [Streptomyces coelicolor
A3(2)] gi|6983741|emb|CAB75380.1| conserved hypothetical
protein SCC88.10c [Streptomyces coelicolor A3(2)]
Length = 1340
Score = 46.2 bits (108), Expect = 6e-04
Identities = 38/140 (27%), Positives = 55/140 (39%), Gaps = 15/140 (10%)
Frame = -2
Query: 410 PPPQLCKRPSGRCRCTAARSAWRGRSTRPCTR-------------CRLPRPARPGSDSCP 270
P P + + A +A +GR+ R TR P PAR + P
Sbjct: 177 PEPAVAETQEAESEAEAESAAPKGRTRRRATRRVSAPAEAGDSEAAAAPEPARAAESAAP 236
Query: 269 ATSGQAAATGQWPAGPAAPRRGRCWGPPPAS--FASPASKYATSGANEAGRREPGRADVA 96
A + +AA +G+ AAPRR R A+ FA+PA A + + P R VA
Sbjct: 237 AKAAEAAESGE----DAAPRRARRRSTRKAATGFAAPAQTAAAAADEAEAPKRPSRPAVA 292
Query: 95 CPAAP*LCTAAIKTSRRGSS 36
AP +T R ++
Sbjct: 293 VFQAPVFAEPQFQTPERAAA 312
