Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002427A_C01 KCC002427A_c01
(511 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_662205.1| 4-diphosphocytidyl-2C-methyl-D-erythritol synth... 35 0.42
ref|NP_215246.1| secY [Mycobacterium tuberculosis H37Rv] gi|1584... 33 2.1
ref|NP_421511.1| hypothetical protein [Caulobacter crescentus CB... 33 2.1
ref|ZP_00059266.1| COG0265: Trypsin-like serine proteases, typic... 33 2.1
ref|NP_343098.1| Transposase ISC1250 [Sulfolobus solfataricus] g... 33 2.7
>ref|NP_662205.1| 4-diphosphocytidyl-2C-methyl-D-erythritol synthase [Chlorobium
tepidum TLS] gi|33516917|sp|Q8KCU3|ISPD_CHLTE
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
(4-diphosphocytidyl-2C-methyl-D-erythritol synthase)
(MEP cytidylyltransferase) (MCT)
gi|21647299|gb|AAM72547.1|
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
[Chlorobium tepidum TLS]
Length = 246
Score = 35.4 bits (80), Expect = 0.42
Identities = 23/95 (24%), Positives = 45/95 (47%)
Frame = +1
Query: 127 RKILLMATAQAERRLRLAATRSLLYSLPINELFELPGRPHVVYQLRSYANTSNPEEAALA 306
+ ++++A + +R++L RS ++ E+ G+P + + ++++ S E +A
Sbjct: 2 KTVVIIAASGVGKRMKLDGGRS-------KQMLEIGGQPVIWHTMKAFQEASTVESVYIA 54
Query: 307 ARSDSPFLFKAFETGQIGPKRLARIHGGKPRVHTI 411
DS +FK K A I GGK R +I
Sbjct: 55 TLPDSIPVFKEIAKANGFTKITAIIEGGKERQDSI 89
>ref|NP_215246.1| secY [Mycobacterium tuberculosis H37Rv]
gi|15840139|ref|NP_335176.1| preprotein translocase SecY
subunit [Mycobacterium tuberculosis CDC1551]
gi|31791918|ref|NP_854411.1| PROBABLE PREPROTEIN
TRANSLOCASE SECY [Mycobacterium bovis subsp. bovis
AF2122/97] gi|3024605|sp|P94926|SECY_MYCTU Preprotein
translocase secY subunit gi|7444762|pir||G70822 probable
secY protein - Mycobacterium tuberculosis (strain H37RV)
gi|1813627|gb|AAD09878.1| preprotein translocase SecY
subunit [Mycobacterium bovis] gi|2911006|emb|CAA17499.1|
secY [Mycobacterium tuberculosis H37Rv]
gi|13880291|gb|AAK44990.1| preprotein translocase SecY
subunit [Mycobacterium tuberculosis CDC1551]
gi|31617505|emb|CAD93615.1| PROBABLE PREPROTEIN
TRANSLOCASE SECY [Mycobacterium bovis subsp. bovis
AF2122/97]
Length = 441
Score = 33.1 bits (74), Expect = 2.1
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = -2
Query: 483 EAAEVQIVVTLGRLGCNRPI*VFMNGVDPRLAAMDASKALGADLPRLERLEEEGRVTASC 304
EA ++ ++ L G + VF GV P + A + L +PR E L +EG+ S
Sbjct: 55 EAGQIYSLINLFSGGALLKLTVFAVGVMPYITASIIVQLLTVVIPRFEELRKEGQAGQSK 114
Query: 303 QCSFFRIASISIA 265
+ R +I++A
Sbjct: 115 MTQYTRYLAIALA 127
>ref|NP_421511.1| hypothetical protein [Caulobacter crescentus CB15]
gi|25398421|pir||C87585 hypothetical protein CC2714
[imported] - Caulobacter crescentus
gi|13424303|gb|AAK24679.1| hypothetical protein
[Caulobacter crescentus CB15]
Length = 212
Score = 33.1 bits (74), Expect = 2.1
Identities = 39/112 (34%), Positives = 48/112 (42%)
Frame = -1
Query: 490 ARGSRRSPDRRHPRPPGL*PSNLGIHEWCGPAACRHGCEQGAWGRFAPSRTP*RGRASHC 311
AR RRS D P PPGL S+ CGP C H AW R+AP
Sbjct: 47 ARPQRRSLD---PTPPGLKLSS----RQCGPRPCPHRVTPSAW-RWAPC------GVVFV 92
Query: 310 ELPMQLLPDC*Y*HSCGADRRRAAAQGAQTAR*LAGYRAGTSSPRGEGAARP 155
M+ P C S G+ ++ A + + AR G+ A TSS AARP
Sbjct: 93 SASMRPAPHC---PSTGS-QQSYACRRRRCARRCHGWPAKTSS---RNAARP 137
>ref|ZP_00059266.1| COG0265: Trypsin-like serine proteases, typically periplasmic,
contain C-terminal PDZ domain [Thermobifida fusca]
Length = 583
Score = 33.1 bits (74), Expect = 2.1
Identities = 24/62 (38%), Positives = 27/62 (42%), Gaps = 5/62 (8%)
Frame = -1
Query: 499 ESPARGSRRSPDRRHPRPPGL*PSNLGIHEWCGP-----AACRHGCEQGAWGRFAPSRTP 335
E+PA GSR +P PRP P + H GP A RHG Q G AP P
Sbjct: 92 EAPAPGSRETPPHPAPRPAPFAPQSHAPHPAWGPPAPDQATARHGA-QAYPGPEAPQPAP 150
Query: 334 *R 329
R
Sbjct: 151 GR 152
>ref|NP_343098.1| Transposase ISC1250 [Sulfolobus solfataricus]
gi|25394643|pir||A90329 transposase ISC1250 [imported] -
Sulfolobus solfataricus gi|13814926|gb|AAK41888.1|
Transposase ISC1250 [Sulfolobus solfataricus]
Length = 342
Score = 32.7 bits (73), Expect = 2.7
Identities = 15/41 (36%), Positives = 21/41 (50%)
Frame = -3
Query: 167 RRSACAVAISRIFLHTEQDDLDFVICVEQGELSPRTGPRTL 45
RR C V + R E++ L+ + E GE+ P T PR L
Sbjct: 241 RRQGCLVHLKRNATKEEREALNVIFSAESGEIKPETCPRLL 281