Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002424A_C01 KCC002424A_c01
(497 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC83827.1| hypothetical protein [Oryza sativa (japonica cul... 37 0.10
ref|XP_329310.1| predicted protein [Neurospora crassa] gi|289255... 37 0.10
pir||I49735 hepatocyte nuclear factor 3 forkhead homolog 8 - mou... 37 0.13
ref|XP_287320.1| RIKEN cDNA C230012O17 gene [Mus musculus] 37 0.13
pir||A34615 profilaggrin - rat (fragment) gi|204144|gb|AAA41161.... 37 0.17
>dbj|BAC83827.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|34394802|dbj|BAC84215.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 109
Score = 37.4 bits (85), Expect = 0.10
Identities = 22/42 (52%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Frame = +2
Query: 236 AACRALGRQH------GAARPGPPRG-HGRAPAGPCRAQTRE 340
AACR LGR+H AA PGPPR R PAGP R E
Sbjct: 44 AACRVLGRRHEAASRQRAASPGPPRATPPRGPAGPLRPAVAE 85
>ref|XP_329310.1| predicted protein [Neurospora crassa] gi|28925599|gb|EAA34621.1|
predicted protein [Neurospora crassa]
Length = 1729
Score = 37.4 bits (85), Expect = 0.10
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Frame = +1
Query: 46 TRQLHSQKHFGASKASLSAPRASTI---TSHSSYIQ*RNSAHTDFGWSKHVQRGARLGLH 216
T Q ++H AS A L APRASTI +H +I+ R+S +D + + A GL
Sbjct: 1179 TPQPTKREHRAASDAMLPAPRASTIRLANTHQPHIKRRDSTSSDSSFKRARASSAGQGL- 1237
Query: 217 SRQELVSCLQGTRQAA-------------WSSKAWTPTRSRTCSSRPLSSSNA*SSSLPS 357
S L+ AA S +A TPT S + P SS S +
Sbjct: 1238 SAGGFPKSLRSNSPAAGSVDSRGNGTKLLTSLRATTPTNSNSRLDTPPSSRGTMGSGMGM 1297
Query: 358 HMPHAPLLRR--ASPG*RMTYGDKRWPSPRRQG 450
+ LR A+ G R + G + P+ ++G
Sbjct: 1298 GVGMRTTLRDSVANSGGRKSPGGMKMPTLGKKG 1330
>pir||I49735 hepatocyte nuclear factor 3 forkhead homolog 8 - mouse
gi|575512|gb|AAA64885.1| forkhead box f1 [Mus musculus
domesticus]
Length = 376
Score = 37.0 bits (84), Expect = 0.13
Identities = 25/64 (39%), Positives = 31/64 (48%)
Frame = +2
Query: 158 HIPTSGGASMCSGEPGSDSTAGRSL*AACRALGRQHGAARPGPPRGHGRAPAGPCRAQTR 337
H+P++GG S G GS AGR + A R LG + AARP P R P P Q
Sbjct: 213 HLPSNGGHSYMGGCGGS---AGRGV-PAPRQLGARFTAARPAPAESWSRTPFTPALQQPG 268
Query: 338 EAAA 349
A+
Sbjct: 269 RPAS 272
>ref|XP_287320.1| RIKEN cDNA C230012O17 gene [Mus musculus]
Length = 177
Score = 37.0 bits (84), Expect = 0.13
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Frame = +2
Query: 107 APLQSPHTVATSNSVTQHIP--TSGGASMCSGEPGSDSTAGRSL*AACRALGRQHGAARP 280
AP +P +S + + G A SG P ++S A +CR + R+ +A P
Sbjct: 29 APAGAPGIKEARSSAGHRVAPGSRGRAGSLSGLPAAESAA------SCRGVRREPRSAPP 82
Query: 281 GPPRGHGRAPAGPCRAQTREAAACQAICHTHHCCGEHRPVRG*HTATSGGHRP 439
P + P R ++A ACQ HT H+ RG T+G RP
Sbjct: 83 ASP-----SDRPPARPPAQDALACQGSAHT-----SHKRRRG---GTAGSRRP 122
>pir||A34615 profilaggrin - rat (fragment) gi|204144|gb|AAA41161.1| profilaggrin
Length = 625
Score = 36.6 bits (83), Expect = 0.17
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Frame = +2
Query: 206 SDSTAGRSL*AACRALGRQHGAARPGP----PRGHGRAPAG---PCRA--------QTRE 340
S TAGR+ + + ++HG + PG RG G +PAG P RA +TRE
Sbjct: 93 SPDTAGRTGSSRGQQSAQRHGDSTPGSTRTGSRGRGESPAGQQSPDRARHIESRRGRTRE 152
Query: 341 AAACQAICHTHHCCGEHRPVRG*HTATSGGHRPGDRDRGADLAAASQRAAN 493
A+A Q+ H G H + T+T HR G+ A+A +AA+
Sbjct: 153 ASASQSSDSEGH-SGAHAGIGQGQTSTI--HRRAGSSSGSQRASAGGQAAD 200
Score = 33.1 bits (74), Expect = 1.9
Identities = 33/104 (31%), Positives = 48/104 (45%), Gaps = 15/104 (14%)
Frame = +2
Query: 206 SDSTAGRSL*AACRALGRQHGAARPGP----PRGHGRAPAG---PCRA--------QTRE 340
S TAGR+ + + ++HG + PG RG G +PAG P RA +TRE
Sbjct: 499 SPDTAGRTGSSRGQQSAQRHGDSTPGSTRTGSRGRGESPAGQQSPDRARHIESRRGRTRE 558
Query: 341 AAACQAICHTHHCCGEHRPVRG*HTATSGGHRPGDRDRGADLAA 472
A+A Q+ H G H + T+T+ HR G+ A+
Sbjct: 559 ASASQSSDSEGH-SGAHAGIGQGQTSTT--HRRAGSSSGSQQAS 599
