Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002417A_C01 KCC002417A_c01
(493 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P29781|STRL_STRGR dTDP-4-dehydrorhamnose reductase (dTDP-4-ke... 35 0.38
gb|AAM54083.1|AF453501_9 Na+/H+ antiporter [Actinosynnema pretio... 35 0.65
ref|NP_629243.1| putative mini-circle protein [Streptomyces coel... 34 1.1
ref|XP_324718.1| hypothetical protein [Neurospora crassa] gi|289... 33 1.5
sp|Q9TSZ3|KCH2_CANFA Potassium voltage-gated channel subfamily H... 33 2.5
>sp|P29781|STRL_STRGR dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase)
(dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose
synthetase) gi|68281|pir||SYSMPG dTDP-dihydrostreptose
synthase - Streptomyces griseus gi|49013|emb|CAA44443.1|
dTDP-dihydrostreptose synthase [Streptomyces griseus]
Length = 304
Score = 35.4 bits (80), Expect = 0.38
Identities = 37/126 (29%), Positives = 47/126 (36%), Gaps = 24/126 (19%)
Frame = +2
Query: 143 LIDTSRRQSTRNWDADGRSPSF--SALHGCAPLLRALIIHKTQAHRVVFNAAEPTA---- 304
++D Q T D R + +AL G AP A I H T +NA P
Sbjct: 182 VVDDQHGQPTWTADLADRLAALGAAALAGTAP---AGIYHATNTGGTTWNALAPETFRLL 238
Query: 305 --------PTRSRVRAAPAHAPMATTY------RAAFGNAEHHKAVIQE----LCGKLGL 430
PT S A PA P + A H +A + E LCG+ G
Sbjct: 239 GADPARVRPTTSLALARPAVRPRYSVLDQSRWKAAGLEPLRHWRAALTESFPALCGRAGR 298
Query: 431 PVPGPK 448
PVPGP+
Sbjct: 299 PVPGPR 304
>gb|AAM54083.1|AF453501_9 Na+/H+ antiporter [Actinosynnema pretiosum subsp. auranticum]
Length = 416
Score = 34.7 bits (78), Expect = 0.65
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -2
Query: 396 ALWCSALPKAAR*VVAIGA*AGAARTRERVGAVGSAALNTTLCACVLCIIKALSNGAHPW 217
AL +A P AR I A RTR V A+ SAA+N + C L ++ + PW
Sbjct: 142 ALSITAFPVLAR----ILAERRMQRTRSGVVALASAAVNDVVAWCALAVVAGIVTARGPW 197
Query: 216 SA 211
SA
Sbjct: 198 SA 199
>ref|NP_629243.1| putative mini-circle protein [Streptomyces coelicolor A3(2)]
gi|11281943|pir||T45271 probable mini-circle protein
[imported] - Streptomyces coelicolor (A3(2))
gi|5541918|emb|CAB51132.1| putative mini-circle protein
[Streptomyces coelicolor A3(2)]
gi|14717100|emb|CAC44206.1| putative mini-circle protein
[Streptomyces coelicolor A3(2)]
Length = 165
Score = 33.9 bits (76), Expect = 1.1
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +2
Query: 236 LRALIIHKTQAHRVVFNAAEPTA-PTRSRVRAAPAHAPMATTYRAAFGNAEHHKAVIQEL 412
L L+ H T R VF E + P R + A + YR A A + +
Sbjct: 59 LLGLLNHLTHVERAVFLGEEVRSWPATFRAASQDGVADVVARYREAVERANR----VLDA 114
Query: 413 CGKLGLPVPGPKP-RPDTSGDSELAH 487
C LG P+P P+P RP S L H
Sbjct: 115 CTDLGAPLPRPRPGRPAPSVRWALTH 140
>ref|XP_324718.1| hypothetical protein [Neurospora crassa] gi|28925855|gb|EAA34854.1|
hypothetical protein [Neurospora crassa]
Length = 1106
Score = 33.5 bits (75), Expect = 1.5
Identities = 22/85 (25%), Positives = 36/85 (41%)
Frame = +2
Query: 191 GRSPSFSALHGCAPLLRALIIHKTQAHRVVFNAAEPTAPTRSRVRAAPAHAPMATTYRAA 370
G SP + HG P L L + HR+ + + R R + + +P+ + +
Sbjct: 727 GSSPVANGTHGIIPSLGELTLDNETRHRLSSDQLPQSVLDRRMKRTSRSPSPLGHSRTPS 786
Query: 371 FGNAEHHKAVIQELCGKLGLPVPGP 445
GN+ A + + GKL P GP
Sbjct: 787 VGNSSAPSAPVSQTNGKLA-PSRGP 810
>sp|Q9TSZ3|KCH2_CANFA Potassium voltage-gated channel subfamily H member 2 (Ether-a-go-go
related gene potassium channel 1) (ERG1) (c-erg) (DERG)
(Ether-a-go-go related protein 1) (Eag related protein
1) gi|6687230|emb|CAB64868.1| potassium channel [Canis
familiaris]
Length = 1158
Score = 32.7 bits (73), Expect = 2.5
Identities = 34/126 (26%), Positives = 46/126 (35%), Gaps = 17/126 (13%)
Frame = +2
Query: 149 DTSRRQSTRNWDADGRSPSFSALHGCAPLLRALIIHKTQAHR------------VVFNAA 292
DT+ R +W A GR+ +F P L AL ++ A VV
Sbjct: 144 DTNHRGPPTSWLAPGRAKTFRLK---LPALLALTTRESSARPGGVGSAGAPGAVVVDVDL 200
Query: 293 EPTAPTRSRVRAAPAHAPMATTYRAAFGNAEHHKAVIQELCGKLGLPVPGPKPR-----P 457
P P+R + A + A G E +A++ G P P P PR P
Sbjct: 201 SPAVPSRESLALDEVTA--MDNHVAGLGPMEEQRALVGSSSPPAGAPEPLPSPRAHSLNP 258
Query: 458 DTSGDS 475
D SG S
Sbjct: 259 DASGSS 264
