Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002410A_C01 KCC002410A_c01
(435 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC86842.1| unnamed protein product [Homo sapiens] 37 0.082
ref|XP_302466.1| similar to RNA polymerase II, AMAnitin resistan... 36 0.14
pir||S01845 DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) - ... 35 0.31
ref|NP_823448.1| hypothetical protein [Streptomyces avermitilis ... 35 0.31
gb|AAC82365.1| unknown [Myxococcus xanthus] 34 0.53
>dbj|BAC86842.1| unnamed protein product [Homo sapiens]
Length = 266
Score = 36.6 bits (83), Expect = 0.082
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Frame = -1
Query: 378 PRQAACPLRTRRTEPEARAPQPSTARCSQRGRQTTRPRP-------HRTSTCAVWSP 229
PR R RRT P +R P P+ A+C R + P R ++C +W P
Sbjct: 155 PRIPVKSARRRRTRPPSRTPAPAPAKCQCRASDSGAPASASLPACRRRPTSCTIWPP 211
>ref|XP_302466.1| similar to RNA polymerase II, AMAnitin resistant AMA-1 (ama-1)
[Homo sapiens]
Length = 304
Score = 35.8 bits (81), Expect = 0.14
Identities = 22/62 (35%), Positives = 31/62 (49%), Gaps = 6/62 (9%)
Frame = -1
Query: 345 RTEPEA--RAPQPST----ARCSQRGRQTTRPRPHRTSTCAVWSP*LRWKSELKPATWSS 184
+ P+A RAP+PS + S+ + T P R TCA +P K+ L P W+S
Sbjct: 148 KAHPKACPRAPEPSPWQQRVKPSEESLERTVPSLGRVQTCATHNPATPHKAGLMPCDWAS 207
Query: 183 DT 178
DT
Sbjct: 208 DT 209
>pir||S01845 DNA (cytosine-5-)-methyltransferase (EC 2.1.1.37) - mouse
Length = 1573
Score = 34.7 bits (78), Expect = 0.31
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 405 RTTSLPRTRPRQAACPLRTRRTEPEARAPQPSTARCSQRGRQTTRPR 265
+ +S PR++PR A R++ EPE AP+ RGR+ R
Sbjct: 158 KRSSRPRSQPRDPAAKRRSKEAEPEQVAPETPRTETRMRGRRRDEKR 204
>ref|NP_823448.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29605919|dbj|BAC69983.1| hypothetical protein
[Streptomyces avermitilis MA-4680]
Length = 289
Score = 34.7 bits (78), Expect = 0.31
Identities = 21/51 (41%), Positives = 25/51 (48%), Gaps = 1/51 (1%)
Frame = -1
Query: 435 GCC-HSSLSSVRTTSLPRTRPRQAACPLRTRRTEPEARAPQPSTARCSQRG 286
GC + SS RT S P +R + CP R RR A P PS RC+ G
Sbjct: 7 GCAARPTSSSTRTASWPGSR--RCRCPRRWRRGSAAAGTPTPSPLRCTPAG 55
>gb|AAC82365.1| unknown [Myxococcus xanthus]
Length = 542
Score = 33.9 bits (76), Expect = 0.53
Identities = 23/69 (33%), Positives = 27/69 (38%)
Frame = -1
Query: 435 GCCHSSLSSVRTTSLPRTRPRQAACPLRTRRTEPEARAPQPSTARCSQRGRQTTRPRPHR 256
GCC + R S P P A EP + PS A S GR+ T PRP R
Sbjct: 154 GCCPTG----RCGSAPGPTPHGA---------EPSPPSQSPSPAPASSGGRRRTHPRPAR 200
Query: 255 TSTCAVWSP 229
S +P
Sbjct: 201 ASAAGATAP 209
