Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002409A_C01 KCC002409A_c01
(787 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_627889.1| putative oxidoreductase [Streptomyces coelicolo... 48 2e-04
gb|AAC28444.2| hyperpolarization-activated, cyclic nucleotide-ga... 44 0.003
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 44 0.003
ref|XP_210362.1| similar to hydroxyproline-rich glycoprotein DZ-... 43 0.007
pir||S36152 MHC class III histocompatibility antigen HLA-B-assoc... 42 0.015
>ref|NP_627889.1| putative oxidoreductase [Streptomyces coelicolor A3(2)]
gi|7481123|pir||T36632 probable oxidoreductase -
Streptomyces coelicolor gi|5019347|emb|CAB44400.1|
putative oxidoreductase [Streptomyces coelicolor A3(2)]
Length = 406
Score = 47.8 bits (112), Expect = 2e-04
Identities = 33/84 (39%), Positives = 38/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 576 GQELAQVLKSLPKLQSRQHRSPLGPPYSRPGRPNSPASLP---CGSASGTPATSGPTPLR 406
G +A + P Q+ HR PY R RP +P C SA SGPT
Sbjct: 226 GTPIAPSTPAAPAPQA-SHRWATSSPYRRCARPGTPGGSRRPRCSSAWTATVPSGPTARG 284
Query: 405 KRSLPSSCATAMTRRSRTARPCQC 334
+RS SS A A RRSRT RP C
Sbjct: 285 RRSTRSSGAPASARRSRTWRPSAC 308
>gb|AAC28444.2| hyperpolarization-activated, cyclic nucleotide-gated channel 2 [Homo
sapiens]
Length = 889
Score = 43.9 bits (102), Expect = 0.003
Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Frame = -2
Query: 723 GPGRRTSPH*IRPPSCGPEARTEPPGTAPPSTMPCGSPTAMRAYALDNDGQELAQVLKSL 544
GP SP +R P GP PG PP++ P G+P + RA G A L
Sbjct: 748 GPLALGSPRLVRRPPPGPAPAAASPGPPPPASPP-GAPASPRAPRTSPYGGLPAAPLAG- 805
Query: 543 PKLQSRQHRSPLGPPYSRPGRPNSPASLPCGSASGTPATS-----GPTPLRKRSLPS 388
P L +R+ S P S +P+ P P +AS PA+S GPTP + + PS
Sbjct: 806 PALPARR-LSRASRPLS-ASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARAAAPS 860
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 43.9 bits (102), Expect = 0.003
Identities = 35/125 (28%), Positives = 45/125 (36%), Gaps = 7/125 (5%)
Frame = -2
Query: 720 PGRRTSPH*IRPPSCGPEARTEPPGTAPPSTMPCGSPTAMRAYALDNDGQELAQVLKSLP 541
P R +P PP P+ + PP AP P P A A A + P
Sbjct: 102 PAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPA-------ARPAPTPPAPP 154
Query: 540 KLQSRQHRSPLGPPYSR-------PGRPNSPASLPCGSASGTPATSGPTPLRKRSLPSSC 382
+ QH P PP + P P PA+ P + + TP P P + P S
Sbjct: 155 PAAAPQHAPPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSP 214
Query: 381 ATAMT 367
A A T
Sbjct: 215 APAAT 219
Score = 43.5 bits (101), Expect = 0.004
Identities = 35/111 (31%), Positives = 41/111 (36%), Gaps = 8/111 (7%)
Frame = -2
Query: 720 PGRRTSPH*IRPPSCGPEARTEPPGTA------PPSTMPCGSPTAMRAYALDNDGQELAQ 559
P R +P PP GP AR P TA PP P P + A A
Sbjct: 169 PAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPTPTPAP 228
Query: 558 VLKSLPKLQSRQHRSPLGPPYSRPGRPNSPASLPCGS--ASGTPATSGPTP 412
P +P PP RPG P P + GS A+G+P G TP
Sbjct: 229 TATPAPTATPAPGSTPGAPPAGRPGAP--PPGVRPGSPPAAGSPPAPGATP 277
>ref|XP_210362.1| similar to hydroxyproline-rich glycoprotein DZ-HRGP [Homo sapiens]
Length = 392
Score = 42.7 bits (99), Expect = 0.007
Identities = 40/144 (27%), Positives = 52/144 (35%), Gaps = 14/144 (9%)
Frame = -2
Query: 774 TPAQRLVHCRCP*GRS*GPGRRTSPH*IRPPSCGPEARTEPPGTAP-----PSTMPCG-- 616
TPA+ H P +PH I PS GP P + P P + PC
Sbjct: 161 TPAKPRTHTHGP-----------APHLIPQPSLGPTLMAPLPTSHPSQAQDPHSWPCSPP 209
Query: 615 -SPTAMRAYALDNDGQELAQ------VLKSLPKLQSRQHRSPLGPPYSRPGRPNSPASLP 457
+PT R +A D Q + LP Q + P P+S P P P +
Sbjct: 210 HTPTKSRTHAQDPSPHLTPQPRPGPMLTVPLPTSHPNQVQDPCSWPHSPPHTPAKPRTHT 269
Query: 456 CGSASGTPATSGPTPLRKRSLPSS 385
GSA P P + LP+S
Sbjct: 270 HGSAPHLTPRPSPGPTLRTPLPTS 293
>pir||S36152 MHC class III histocompatibility antigen HLA-B-associated protein 2
[similarity] - human
Length = 1872
Score = 41.6 bits (96), Expect = 0.015
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 5/111 (4%)
Frame = -2
Query: 702 PH*IRPPSCGPEARTEPPG-----TAPPSTMPCGSPTAMRAYALDNDGQELAQVLKSLPK 538
P + PP+ P + EP G T P + G P ++ Q+ Q+LK +
Sbjct: 602 PEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQ 661
Query: 537 LQSRQHRSPLGPPYSRPGRPNSPASLPCGSASGTPATSGPTPLRKRSLPSS 385
Q +QH+ PP P P P +L PA P P K P +
Sbjct: 662 HQWQQHQQGSAPPTPVPPSPPQPVTL-----GAVPAPKAPPPPPKALYPGA 707
