Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002407A_C01 KCC002407A_c01
(551 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T33656 hypothetical protein T04C4.1 - Caenorhabditis elegans 33 2.6
ref|NP_507515.1| putative protein, with 2 coiled coil-4 domains,... 33 2.6
gb|AAO91702.1| Hypothetical protein T04C4.1b [Caenorhabditis ele... 33 2.6
ref|NP_500178.2| putative protein of bilaterial origin (4C999) [... 33 2.6
emb|CAC18567.2| xylosyltransferase II [Mus musculus] 33 3.4
>pir||T33656 hypothetical protein T04C4.1 - Caenorhabditis elegans
Length = 883
Score = 33.1 bits (74), Expect = 2.6
Identities = 17/64 (26%), Positives = 25/64 (38%)
Frame = -3
Query: 198 TSFPCHRQTKLTPCTCQQTSCQLVFRPSRINLAILVQDRLDITVSNVQKNGNGLRAPPPS 19
T FPCHR TP + C P + +++ D +TV + G+ P
Sbjct: 734 TDFPCHRSATATPSQSTSSMCDPAMNPENV---LIIADIEQLTVKVLSTEGSDEVTSPSE 790
Query: 18 GCVA 7
VA
Sbjct: 791 SIVA 794
>ref|NP_507515.1| putative protein, with 2 coiled coil-4 domains, of bilaterial
origin (181.9 kD) (5S418) [Caenorhabditis elegans]
gi|11065658|emb|CAC14406.1| Hypothetical protein
Y59A8B.1 [Caenorhabditis elegans]
Length = 1641
Score = 33.1 bits (74), Expect = 2.6
Identities = 21/71 (29%), Positives = 33/71 (45%)
Frame = -1
Query: 320 PSHYGEHPQTEQSARKALPTPVMARGCEAYRDCTIKWFEQPRPSLVTDKPSSHLAPASKR 141
PS+Y +HP P P M+ G Y + QPRP+ VT +P + + P +
Sbjct: 138 PSYYIQHP----------PPPSMSNGAPYYPHMNPSPYYQPRPNYVT-QPPAPIIPPPQP 186
Query: 140 PANSSSVPHAS 108
P ++S A+
Sbjct: 187 PVMTASAAAAA 197
>gb|AAO91702.1| Hypothetical protein T04C4.1b [Caenorhabditis elegans]
Length = 906
Score = 33.1 bits (74), Expect = 2.6
Identities = 17/64 (26%), Positives = 25/64 (38%)
Frame = -3
Query: 198 TSFPCHRQTKLTPCTCQQTSCQLVFRPSRINLAILVQDRLDITVSNVQKNGNGLRAPPPS 19
T FPCHR TP + C P + +++ D +TV + G+ P
Sbjct: 757 TDFPCHRSATATPSQSTSSMCDPAMNPENV---LIIADIEQLTVKVLSTEGSDEVTSPSE 813
Query: 18 GCVA 7
VA
Sbjct: 814 SIVA 817
>ref|NP_500178.2| putative protein of bilaterial origin (4C999) [Caenorhabditis
elegans] gi|22532778|gb|AAC68908.3| Hypothetical protein
T04C4.1a [Caenorhabditis elegans]
Length = 907
Score = 33.1 bits (74), Expect = 2.6
Identities = 17/64 (26%), Positives = 25/64 (38%)
Frame = -3
Query: 198 TSFPCHRQTKLTPCTCQQTSCQLVFRPSRINLAILVQDRLDITVSNVQKNGNGLRAPPPS 19
T FPCHR TP + C P + +++ D +TV + G+ P
Sbjct: 757 TDFPCHRSATATPSQSTSSMCDPAMNPENV---LIIADIEQLTVKVLSTEGSDEVTSPSE 813
Query: 18 GCVA 7
VA
Sbjct: 814 SIVA 817
>emb|CAC18567.2| xylosyltransferase II [Mus musculus]
Length = 865
Score = 32.7 bits (73), Expect = 3.4
Identities = 37/149 (24%), Positives = 54/149 (35%), Gaps = 9/149 (6%)
Frame = -3
Query: 432 GRGRAHGRRPAPLHGRPKCRSAPLIYVYSCIRYNQTASVSLWRAPPDRAVCPQSIAHTCD 253
GR + GRR GR + P+ V + Q AS + APP A Q+++
Sbjct: 69 GRRGSAGRRHGRWRGRAESPGVPVANVVRAVTSRQRASRRVPPAPPPEAPGRQNLSGAAA 128
Query: 252 GARLRGVP*LHHKMV*ATTSFPCHRQTKLTPCTCQQT------SCQLVFRPSRINLAILV 91
G L G P FP H T Q T C++V + + LA
Sbjct: 129 GEALIGAP-----------GFPQHGDTGSVEGAPQPTDNTFTPKCEIVGKDALSALARAS 177
Query: 90 QDRLDITVSNV---QKNGNGLRAPPPSGC 13
+ ++NV + GN + P C
Sbjct: 178 TKQCQQEIANVVCLHQAGNLMPKSVPRHC 206