KCC002404A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002404A_C01 KCC002404A_c01
ttagagtgcatttgcacaAGCAGCCACTGGAACACAACGCTGAGGACTGCTTGGGTTGAA
GGTGTCGCTGCACGCTAAGCGTCTCGCTTTGTACAATTCGATTTGCCTATTGCGCTTAGA
TACAATTTAGCATACATAGAGCCTAACCTTTGATGGTCCACACACCCCACGACAAGGACA
CGGTGAAGCGAGTCGCAAGCTACGCACAGGCTGTCCAGGGCCCAGCTCACGACGAGCAAT
CTCTTTCCCCGGCCTCCTCCAAGCCAGCTATGGCGCCAGCACCGAGCCCGCGTTCATGGC
TGGTCACCGCAGTAGCCATCTTGTGCTGGTATTGCAGCAATATCGGCGTGCTGCTGCTCA
ATAAGTATCTGCTTTCTAGCACCGGGTTTGACAACCCGGTTTTTCTCACGCTATGTCACA
TGGTGGCTTGCGTGAGCATCGGGGGGCTGTCCTCGGTGCTTGGCGTGACCCCGCTCAAGC
TGGTCAAGTCGTGGCAGCAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002404A_C01 KCC002404A_c01
         (500 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO16996.1| Putative phosphate/phosphoenolpyruvate translocat...    73  2e-12
ref|NP_187640.1| phosphate translocator-related [Arabidopsis tha...    72  3e-12
gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like p...    70  1e-11
ref|NP_196036.1| phosphate translocator-related [Arabidopsis tha...    70  1e-11
ref|NP_172712.1| phosphate translocator-related [Arabidopsis tha...    67  9e-11

>gb|AAO16996.1| Putative phosphate/phosphoenolpyruvate translocator protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 322

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 39/85 (45%), Positives = 51/85 (59%), Gaps = 6/85 (7%)
 Frame = +3

Query: 255 SSKPAMAPAPS-----PRSWLVTAVAILCWYCSNIGVLLLNKYLLSSTGFDNPVFLTLCH 419
           ++K   AP+P      P     T   +  WY SNIGVLLLNKYLLS+ GF  P+FLT+CH
Sbjct: 2   TAKGGAAPSPGGAGGLPNGRFFTVGLVTAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCH 61

Query: 420 MVACVSIG-GLSSVLGVTPLKLVKS 491
           M AC  +     + L V P++LV+S
Sbjct: 62  MSACALLSYAAIAWLRVVPMQLVRS 86

>ref|NP_187640.1| phosphate translocator-related [Arabidopsis thaliana]
           gi|6056196|gb|AAF02813.1|AC009400_9 unknown protein
           [Arabidopsis thaliana]
          Length = 355

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 44/119 (36%), Positives = 65/119 (53%), Gaps = 1/119 (0%)
 Frame = +3

Query: 147 PLMVHTPHDKDTVKRVASYAQAVQGPAHDEQSLSPASSKPAMAPAPSPRSWLVTAVAILC 326
           PL+  +   K     ++S  +  +     +  +S +SS P        +  L  +  I+ 
Sbjct: 12  PLLSFSHQKKQPNLSISSTTKMNKKNPDQKSDMSSSSSSPK-------KQTLFISSLIIL 64

Query: 327 WYCSNIGVLLLNKYLLSSTGFDNPVFLTLCHMVACVSIGGLSSV-LGVTPLKLVKSWQQ 500
           WY SNIGVLLLNK+LLS+ GF  P+FLT+CHM AC  +  +S V L + PL+ +KS  Q
Sbjct: 65  WYTSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYVSIVFLKLVPLQYLKSRSQ 123

>gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like protein
           [Arabidopsis thaliana] gi|20259810|gb|AAM13252.1|
           phosphate/phosphoenolpyruvate translocator-like protein
           [Arabidopsis thaliana]
          Length = 309

 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 36/68 (52%), Positives = 47/68 (68%), Gaps = 1/68 (1%)
 Frame = +3

Query: 300 LVTAVAILCWYCSNIGVLLLNKYLLSSTGFDNPVFLTLCHMVACVSIGGLSSV-LGVTPL 476
           L  +  I+ WY SNIGVLLLNK+LLS+ GF  P+FLT+CHM AC  +  +S V L + PL
Sbjct: 10  LFISTLIISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYISIVFLKLVPL 69

Query: 477 KLVKSWQQ 500
           + +KS  Q
Sbjct: 70  QHLKSRSQ 77

>ref|NP_196036.1| phosphate translocator-related [Arabidopsis thaliana]
           gi|9955571|emb|CAC05498.1| phosphate/phosphoenolpyruvate
           translocator-like protein [Arabidopsis thaliana]
           gi|21536504|gb|AAM60836.1| phosphate/phosphoenolpyruvate
           translocator-like protein [Arabidopsis thaliana]
          Length = 309

 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 36/68 (52%), Positives = 47/68 (68%), Gaps = 1/68 (1%)
 Frame = +3

Query: 300 LVTAVAILCWYCSNIGVLLLNKYLLSSTGFDNPVFLTLCHMVACVSIGGLSSV-LGVTPL 476
           L  +  I+ WY SNIGVLLLNK+LLS+ GF  P+FLT+CHM AC  +  +S V L + PL
Sbjct: 10  LFISTLIISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYISIVFLKLVPL 69

Query: 477 KLVKSWQQ 500
           + +KS  Q
Sbjct: 70  QHLKSRSQ 77

>ref|NP_172712.1| phosphate translocator-related [Arabidopsis thaliana]
           gi|8778643|gb|AAF79651.1|AC025416_25 F5O11.25
           [Arabidopsis thaliana]
           gi|9502394|gb|AAF88101.1|AC025417_29 T12C24.5
           [Arabidopsis thaliana] gi|26449593|dbj|BAC41922.1|
           unknown protein [Arabidopsis thaliana]
          Length = 361

 Score = 67.4 bits (163), Expect = 9e-11
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +3

Query: 222 PAHDEQSLSPASSKPAMAPAPSPRSWLVTAVAILCWYCSNIGVLLLNKYLLSSTGFDNPV 401
           P     S + +  KP    +P+    ++TA  I  W+ SNIGVLLLNKYLL   GF  P+
Sbjct: 31  PGTPPHSSASSPLKPFFLSSPTVSPTILTAAIIAAWFGSNIGVLLLNKYLLFYYGFRYPI 90

Query: 402 FLTLCHMVACVSI-GGLSSVLGVTPLKLVKSWQQ 500
           FLT+ HM++C +    + ++ G+ P + + S +Q
Sbjct: 91  FLTMTHMLSCAAYSSAVINIAGIVPRQHILSRRQ 124



EST assemble image


clone accession position
1 MXL044b10_r BP095585 1 470
2 HCL029b08_r AV641174 19 500




Chlamydomonas reinhardtii
Kazusa DNA Research Institute