KCC002399A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002399A_C01 KCC002399A_c01
agtaaattatatcaACTGCATGAAGGAGCCACACCTAGCATGGCTGAGCCCAACAACAAC
TCAGATTGCGACCTCGCCAGGCTCACGCCTGAGCTCATCCAGCGAGTCGCAAGCTTTCTC
CATCCGAACGAGGTCACAAACAGCTTTAAACTTGTCAATAAAGAGATCGCTGCGAGCCTG
CGCCGCGACTACAAAACCTTCAAGCTGCGTCGTGTCCCGGTCTCGGCGCGGTTCTGCCCT
ACGCTCTTCAAACGGACGTGTAAGGGGTTCGTCCTGCCCCCTCTCGCGCTGCAGCCCTGG
CCAGGCGCTAGCTTCGTGTGGCAATGGGGCCGCCCCGAGCCCTGGCGCGTTCTGACTCGG
CGCCAGCGGCAGCGGCTGCTGTGCCTAGCAGCCTCCAGCCACCACGCCCCCAGCCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002399A_C01 KCC002399A_c01
         (416 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P14328|SP96_DICDI Spore coat protein SP96 gi|84145|pir||S0763...    47  6e-05
gb|AAO50776.1| similar to Dictyostelium discoideum (Slime mold)....    47  6e-05
ref|ZP_00065540.1| hypothetical protein [Microbulbifer degradans...    40  0.010
ref|XP_300853.1| hypothetical protein XP_300853 [Homo sapiens]         39  0.017
ref|NP_872435.1| hypothetical protein FLJ35107 [Homo sapiens] gi...    39  0.022

>sp|P14328|SP96_DICDI Spore coat protein SP96 gi|84145|pir||S07638 spore coat protein
           SP96 precursor - slime mold  (Dictyostelium discoideum)
           gi|295736|emb|CAA34508.1| spore coat protein sp96
           [Dictyostelium discoideum]
          Length = 600

 Score = 47.0 bits (110), Expect = 6e-05
 Identities = 44/122 (36%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
 Frame = +2

Query: 50  PTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLS-IKRSLRACAATTKPSSCVVSRSR 226
           PTTT  +TS  S L S+SES A      S +A   S    S  + AA++ PSS   S S 
Sbjct: 419 PTTTTGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSP 478

Query: 227 RGSALRSS-NGRVRGSSCPLSRCSPGQA-LASCGNGAAPSPGAF*LGASGSGCCA*QPPA 400
             SA  SS +     SS P S  S   A  +S  + +APS  A    AS S   +    A
Sbjct: 479 SSSAASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSSSASSSSASSSSASSAATTA 538

Query: 401 TT 406
            T
Sbjct: 539 AT 540

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 22/76 (28%), Positives = 41/76 (53%)
 Frame = +2

Query: 47  SPTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLSIKRSLRACAATTKPSSCVVSRSR 226
           SP+++  ++SP S  +SSS S + +  + S +A + S   S  + ++++ PSS   S S 
Sbjct: 459 SPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSS--SASSSSAPSSSASSSSA 516

Query: 227 RGSALRSSNGRVRGSS 274
             S+  SS+     +S
Sbjct: 517 PSSSASSSSASSSSAS 532

>gb|AAO50776.1| similar to Dictyostelium discoideum (Slime mold). Spore coat
           protein SP96
          Length = 600

 Score = 47.0 bits (110), Expect = 6e-05
 Identities = 44/122 (36%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
 Frame = +2

Query: 50  PTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLS-IKRSLRACAATTKPSSCVVSRSR 226
           PTTT  +TS  S L S+SES A      S +A   S    S  + AA++ PSS   S S 
Sbjct: 419 PTTTTGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSP 478

Query: 227 RGSALRSS-NGRVRGSSCPLSRCSPGQA-LASCGNGAAPSPGAF*LGASGSGCCA*QPPA 400
             SA  SS +     SS P S  S   A  +S  + +APS  A    AS S   +    A
Sbjct: 479 SSSAASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSSSASSSSASSSSASSAATTA 538

Query: 401 TT 406
            T
Sbjct: 539 AT 540

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 22/76 (28%), Positives = 41/76 (53%)
 Frame = +2

Query: 47  SPTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLSIKRSLRACAATTKPSSCVVSRSR 226
           SP+++  ++SP S  +SSS S + +  + S +A + S   S  + ++++ PSS   S S 
Sbjct: 459 SPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSS--SASSSSAPSSSASSSSA 516

Query: 227 RGSALRSSNGRVRGSS 274
             S+  SS+     +S
Sbjct: 517 PSSSASSSSASSSSAS 532

>ref|ZP_00065540.1| hypothetical protein [Microbulbifer degradans 2-40]
          Length = 798

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 31/97 (31%), Positives = 47/97 (47%)
 Frame = +2

Query: 38  AWLSPTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLSIKRSLRACAATTKPSSCVVS 217
           +W S T   +A S GS  SSSS S + S    S ++ + S   S  + ++++  SS   S
Sbjct: 305 SWNSITEMSVAASGGSSSSSSSSSSSSS----SSSSTSSSSSSSSSSSSSSSSSSSSSSS 360

Query: 218 RSRRGSALRSSNGRVRGSSCPLSRCSPGQALASCGNG 328
            S   S+  SSNG V G++   +  S    LA+   G
Sbjct: 361 SSSSSSSSSSSNGGVPGNTYTATPDSLNDVLATVSGG 397

>ref|XP_300853.1| hypothetical protein XP_300853 [Homo sapiens]
          Length = 252

 Score = 38.9 bits (89), Expect = 0.017
 Identities = 31/109 (28%), Positives = 55/109 (50%)
 Frame = +2

Query: 47  SPTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLSIKRSLRACAATTKPSSCVVSRSR 226
           SP+++  ++SP S  S+SS S + S  + S ++ N S   S  + ++++  SS   S S 
Sbjct: 73  SPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSS 132

Query: 227 RGSALRSSNGRVRGSSCPLSRCSPGQALASCGNGAAPSPGAF*LGASGS 373
              +  SS+     SS P S  S   + +S  + ++ SP +    +SGS
Sbjct: 133 SSPSSSSSS----SSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGS 177

 Score = 37.0 bits (84), Expect = 0.064
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
 Frame = +2

Query: 47  SPTTTQIATSPGSRL-SSSSESQAFSIRTRSQTALNLSIKRSLRACAATTKPSSCVVSRS 223
           SP+++  ++S  S   SSSS S + S  + S +  + S   S    ++++ PSS   S S
Sbjct: 102 SPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSS 161

Query: 224 RRGSALRSSNGRVRGSSCPLSRCSPGQALAS-CGNGAAPSPGAF*LGASGSGCCA*QPPA 400
              S+  SS+    GSS   S  SP  + +S   + ++PSP +     S S      P +
Sbjct: 162 SSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRS--SSPSSSSSSTSSPSS 219

Query: 401 TTP 409
           ++P
Sbjct: 220 SSP 222

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 32/122 (26%), Positives = 59/122 (48%)
 Frame = +2

Query: 50  PTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLSIKRSLRACAATTKPSSCVVSRSRR 229
           P+++  ++SP S  SSSS S + S  + S ++   S   S  + ++++ PSS   S S  
Sbjct: 56  PSSSSSSSSPSSSPSSSSPSSSHSSSSPSSSSSTSSPSSS--SSSSSSSPSSSNSSSSSS 113

Query: 230 GSALRSSNGRVRGSSCPLSRCSPGQALASCGNGAAPSPGAF*LGASGSGCCA*QPPATTP 409
            S+  SS+     SS P S  S   + +S  + +  S  +    +S S   +   P+++ 
Sbjct: 114 SSSPSSSSS--SSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSS 171

Query: 410 PA 415
           P+
Sbjct: 172 PS 173

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 29/101 (28%), Positives = 49/101 (47%), Gaps = 3/101 (2%)
 Frame = +2

Query: 47  SPTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLSIKRSLRACA---ATTKPSSCVVS 217
           SP+++   +SP S  SSSS S + S  + S ++ + S   S  + +   +++ PSS   S
Sbjct: 82  SPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSS--S 139

Query: 218 RSRRGSALRSSNGRVRGSSCPLSRCSPGQALASCGNGAAPS 340
            S   S   SS+     SS   S  S   + +   +G++PS
Sbjct: 140 SSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPS 180

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 31/121 (25%), Positives = 53/121 (43%)
 Frame = +2

Query: 47  SPTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLSIKRSLRACAATTKPSSCVVSRSR 226
           S +++  ++SP S   SSS S + S  + S T+   S   S  +  +++  SS   S S 
Sbjct: 59  SSSSSSPSSSPSSSSPSSSHSSS-SPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSP 117

Query: 227 RGSALRSSNGRVRGSSCPLSRCSPGQALASCGNGAAPSPGAF*LGASGSGCCA*QPPATT 406
             S+  SS+     SS P S  S   +  S  + +  S       +S S   +  P +++
Sbjct: 118 SSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSS------SSSSSSSSSSSPSSSS 171

Query: 407 P 409
           P
Sbjct: 172 P 172

>ref|NP_872435.1| hypothetical protein FLJ35107 [Homo sapiens]
           gi|21751020|dbj|BAC03887.1| unnamed protein product
           [Homo sapiens] gi|33872427|gb|AAH16304.1| FLJ35107
           protein [Homo sapiens]
          Length = 258

 Score = 38.5 bits (88), Expect = 0.022
 Identities = 36/125 (28%), Positives = 62/125 (48%), Gaps = 2/125 (1%)
 Frame = +2

Query: 47  SPTTTQIATSPGSRL-SSSSESQAFSIRTRSQTALNLSIKRSLRACAATTKPSSCVVSRS 223
           SP+++  ++S  S   SSSS S + S  + S +  + S   S    ++++ PSS   S S
Sbjct: 103 SPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSS 162

Query: 224 RRGSALRSSNGRVRGSSCPLSRCSPGQALAS-CGNGAAPSPGAF*LGASGSGCCA*QPPA 400
              S+  SS+    GSS   S  SP  + +S   + ++PSP +    +S S   +   P+
Sbjct: 163 SSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSS---PS 219

Query: 401 TTPPA 415
           T+ P+
Sbjct: 220 TSSPS 224

 Score = 36.6 bits (83), Expect = 0.084
 Identities = 30/120 (25%), Positives = 58/120 (48%)
 Frame = +2

Query: 47  SPTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLSIKRSLRACAATTKPSSCVVSRSR 226
           SP+++  ++SP S  SSSS S + S  + S ++ + S      + ++++  SS   S S 
Sbjct: 64  SPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSS 123

Query: 227 RGSALRSSNGRVRGSSCPLSRCSPGQALASCGNGAAPSPGAF*LGASGSGCCA*QPPATT 406
             S+  SS+     SS   S  SP  + +S  + ++ S  +    +S S   +   P+++
Sbjct: 124 SSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSS 183

 Score = 36.6 bits (83), Expect = 0.084
 Identities = 32/122 (26%), Positives = 60/122 (48%)
 Frame = +2

Query: 50  PTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLSIKRSLRACAATTKPSSCVVSRSRR 229
           P+++  ++SP S  SSSS S + S  + S ++ + S   S  + ++++ PSS   S S  
Sbjct: 56  PSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSS-STSSPSSSSSSSSSSSPSSSNSSSSSS 114

Query: 230 GSALRSSNGRVRGSSCPLSRCSPGQALASCGNGAAPSPGAF*LGASGSGCCA*QPPATTP 409
            S+  SS+     SS P S  S   + +S  + +  S  +    +S S   +   P+++ 
Sbjct: 115 SSSPSSSSS--SSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSS 172

Query: 410 PA 415
           P+
Sbjct: 173 PS 174

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
 Frame = +2

Query: 47  SPTTTQIATSPGSRLSSSSESQAFSIRTRSQTALNLSIKRSLRACAATTKPSSCVVSRSR 226
           S +++  ++SP S  SS S S + S  + S ++ + S   S  + ++++ PSS   S S 
Sbjct: 119 SSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSS-SSSSSSSSPSSS--SPSS 175

Query: 227 RGSALRSSNGRVRGSSCPLSRC----SPGQALASCGNGAAPSPGAF*LGASGSGCCA*QP 394
            GS+  SSN     SS   S      SP  +  S  + +  SP       S S   +  P
Sbjct: 176 SGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPST--SSPSSSSPSSSSP 233

Query: 395 PATTPPA 415
            ++ P A
Sbjct: 234 SSSCPSA 240



EST assemble image


clone accession position
1 HCL028d05_r AV641138 1 409
2 LCL043h05_r AV628568 15 417




Chlamydomonas reinhardtii
Kazusa DNA Research Institute