Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002392A_C01 KCC002392A_c01
(568 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM63070.1| VirE2-interacting protein VIP1 [Arabidopsis thali... 70 3e-11
gb|AAF37279.4| VirE2-interacting protein VIP1 [Arabidopsis thali... 69 4e-11
ref|NP_564486.1| VirE2-interacting protein VIP1 [Arabidopsis tha... 69 4e-11
gb|AAC04862.1| shoot-forming PKSF1 [Paulownia kawakamii] 65 5e-10
gb|AAK53449.1| unknown [Streptomyces aureofaciens] 65 5e-10
>gb|AAM63070.1| VirE2-interacting protein VIP1 [Arabidopsis thaliana]
Length = 341
Score = 69.7 bits (169), Expect = 3e-11
Identities = 60/185 (32%), Positives = 81/185 (43%), Gaps = 10/185 (5%)
Frame = +2
Query: 17 VEEEQELEDEDEELQDAAEEGGRRRGVKGGRSRS----RGARASGGGDDSKGGDKRGGGN 184
V EE+ L E + R + G S + AS G DS K+ G
Sbjct: 126 VTEEKFLATSSGEKKKGNHHHSRSNSMDGEMSSASFNIESILASVSGKDS---GKKNMGM 182
Query: 185 NGRTQRELMLLDPKRVRRIIANRMSAAKSKERKQQYTEQLSQMLDDTERERAGLQQQMDR 364
G EL LLDPKR +RI+ANR SAA+SKERK +YT +L + + + E L Q+
Sbjct: 183 GGDRLAELALLDPKRAKRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQV-- 240
Query: 365 YKVDNTRLEGYVEGVRREASSLTSTLTALRQQGD------ELLRQLHAARMAAAGGQSPQ 526
T L+ + E L L AL QQ + E LR R+ G+ PQ
Sbjct: 241 -----TMLQRGTSELNTENKHLKMRLQALEQQAELRDALNEALRD-ELNRLKVVAGEIPQ 294
Query: 527 AAGSA 541
G++
Sbjct: 295 GNGNS 299
>gb|AAF37279.4| VirE2-interacting protein VIP1 [Arabidopsis thaliana]
Length = 261
Score = 68.9 bits (167), Expect = 4e-11
Identities = 59/185 (31%), Positives = 81/185 (42%), Gaps = 10/185 (5%)
Frame = +2
Query: 17 VEEEQELEDEDEELQDAAEEGGRRRGVKGGRSRS----RGARASGGGDDSKGGDKRGGGN 184
V EE+ + E + R + G S + AS G DS K+ G
Sbjct: 46 VTEEKFIATSSGEKKKGNHHHSRSNSMDGEMSSASFNIESILASVSGKDS---GKKNMGM 102
Query: 185 NGRTQRELMLLDPKRVRRIIANRMSAAKSKERKQQYTEQLSQMLDDTERERAGLQQQMDR 364
G EL LLDPKR +RI+ANR SAA+SKERK +YT +L + + + E L Q+
Sbjct: 103 GGDRLAELALLDPKRAKRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQV-- 160
Query: 365 YKVDNTRLEGYVEGVRREASSLTSTLTALRQQGD------ELLRQLHAARMAAAGGQSPQ 526
T L+ + E L L AL QQ + E LR R+ G+ PQ
Sbjct: 161 -----TMLQRGTSELNTENKHLKMRLQALEQQAELRDALNEALRD-ELNRLKVVAGEIPQ 214
Query: 527 AAGSA 541
G++
Sbjct: 215 GNGNS 219
>ref|NP_564486.1| VirE2-interacting protein VIP1 [Arabidopsis thaliana]
gi|25405127|pir||D96500 probable transcription factor
[imported] - Arabidopsis thaliana
gi|7523681|gb|AAF63120.1|AC009526_5 Putative
transcription factor [Arabidopsis thaliana]
gi|17529334|gb|AAL38894.1| putative VirE2-interacting
protein VIP1 [Arabidopsis thaliana]
gi|21436379|gb|AAM51359.1| putative VirE2-interacting
protein VIP1 [Arabidopsis thaliana]
Length = 341
Score = 68.9 bits (167), Expect = 4e-11
Identities = 59/185 (31%), Positives = 81/185 (42%), Gaps = 10/185 (5%)
Frame = +2
Query: 17 VEEEQELEDEDEELQDAAEEGGRRRGVKGGRSRS----RGARASGGGDDSKGGDKRGGGN 184
V EE+ + E + R + G S + AS G DS K+ G
Sbjct: 126 VTEEKFIATSSGEKKKGNHHHSRSNSMDGEMSSASFNIESILASVSGKDS---GKKNMGM 182
Query: 185 NGRTQRELMLLDPKRVRRIIANRMSAAKSKERKQQYTEQLSQMLDDTERERAGLQQQMDR 364
G EL LLDPKR +RI+ANR SAA+SKERK +YT +L + + + E L Q+
Sbjct: 183 GGDRLAELALLDPKRAKRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQV-- 240
Query: 365 YKVDNTRLEGYVEGVRREASSLTSTLTALRQQGD------ELLRQLHAARMAAAGGQSPQ 526
T L+ + E L L AL QQ + E LR R+ G+ PQ
Sbjct: 241 -----TMLQRGTSELNTENKHLKMRLQALEQQAELRDALNEALRD-ELNRLKVVAGEIPQ 294
Query: 527 AAGSA 541
G++
Sbjct: 295 GNGNS 299
>gb|AAC04862.1| shoot-forming PKSF1 [Paulownia kawakamii]
Length = 340
Score = 65.5 bits (158), Expect = 5e-10
Identities = 54/165 (32%), Positives = 76/165 (45%), Gaps = 7/165 (4%)
Frame = +2
Query: 77 GGRRRGVKGGRSRSRGARASGGGDDSKGGDKRGGGNNGRTQRELMLLDPKRVRRIIANRM 256
GG G + G S S +S + KR + EL L+DPKR +RI+ANR
Sbjct: 122 GGSSPGPRHGHSNSVDEYSSAMSSELDSIAKRAMAADRLA--ELSLIDPKRAKRILANRQ 179
Query: 257 SAAKSKERKQQYTEQLSQMLDDTERERAGLQQQMDRYKVDNTRLEGYVEGVRREASSLTS 436
SAA+SKERK +YT +L + + + E L Q+ + D T G+ E L
Sbjct: 180 SAARSKERKTRYTSELERKVQTLQTEATTLSAQITLLQRDTT-------GLTTENKELKM 232
Query: 437 TLTALRQQ-------GDELLRQLHAARMAAAGGQSPQAAGSAPGS 550
L A+ QQ + L +L ++AA GQ P G+ GS
Sbjct: 233 KLQAMEQQAHLRDALNEALKDELQWLKIAA--GQVPGVNGNNRGS 275
>gb|AAK53449.1| unknown [Streptomyces aureofaciens]
Length = 579
Score = 65.5 bits (158), Expect = 5e-10
Identities = 74/218 (33%), Positives = 82/218 (36%), Gaps = 42/218 (19%)
Frame = -3
Query: 533 RPPAATGRRPRPCG-------RRAAGAAARR-----------------------PAAAGQ 444
RPPA TG R P G RR+A ARR A AG+
Sbjct: 331 RPPATTGPRTGPAGPAGPAGPRRSAPGRARRIRARGSRCRCCRGAGVEPEGPANGAGAGR 390
Query: 443 LRWTSG-RRPRGARPP-RSPPGGCCPPCIGPSAVAGPPARAPCHPASDSAAPCTAACAPW 270
TSG RP+ ARPP R+PPG P P+ A PAR PAS P + AP
Sbjct: 391 PTATSGYARPQHARPPARAPPG----PRPAPTRAASTPARTGSRPASPPTRPTAPSPAP- 445
Query: 269 TWRQTCGSR*CGARAWGPAASAPAGCGRCCRRRACRRPCCRRPRRWPERRASASGRP--- 99
A AA PA R P R RR P A+ +GRP
Sbjct: 446 -----------AAPPRAAAAPTPAR-----RPPPPPTPPVPRARRGP---AAGNGRPPST 486
Query: 98 -*RRGGGRPPQLHPAAP------RPHPPTPAPPQHPVA 6
R G R P P AP RP PP PP HP A
Sbjct: 487 RDRTAGTRAPASPPGAPPPVRRRRPPPPRAPPPHHPSA 524
Score = 58.9 bits (141), Expect = 5e-08
Identities = 62/198 (31%), Positives = 69/198 (34%), Gaps = 17/198 (8%)
Frame = -3
Query: 545 PAPTRPPAATGRRPRPCGRRAAGAAARRPAAAGQLRWTSGRRPRGARPPRSPPGGCCPPC 366
P RPPA PRP RAA AR +G RP A PP P P
Sbjct: 400 PQHARPPARAPPGPRPAPTRAASTPAR-----------TGSRP--ASPPTRPTAPSPAPA 446
Query: 365 IGPSAVAGP-PARAPCHPASDSAAPCTAACA------PWTWRQTCGSR*CGARAWGPAAS 207
P A A P PAR P P + A P T +T G+R A +
Sbjct: 447 APPRAAAAPTPARRPPPPPTPPVPRARRGPAAGNGRPPSTRDRTAGTR---------APA 497
Query: 206 APAGCGRCCRRRACRRPCCRRPRRWPERRASASGRP*RRGGGRPPQLHPAAPRPHPP--- 36
+P G RRR P P R SA P RPP AA RP PP
Sbjct: 498 SPPGAPPPVRRRRPPPPRAPPPHHPSARNPSARATP----RPRPPPRPSAAARPEPPPRA 553
Query: 35 -------TPAPPQHPVAP 3
P PP P +P
Sbjct: 554 APGPSGTAPGPPSGPRSP 571
Score = 41.6 bits (96), Expect = 0.008
Identities = 60/206 (29%), Positives = 67/206 (32%), Gaps = 25/206 (12%)
Frame = -3
Query: 545 PAPTRPPAATGRRPRPCGRRAAGAAARRPAAAGQLRWTSGRRPRGARPPRSPPGGCCPPC 366
P R A R P GR+ A RP G SG R R R+P G P
Sbjct: 229 PGEQRRQRAEHRVRGPLGRQRQQPGAHRP---GHRSHQSGHRHRR----RAPLGAATPDR 281
Query: 365 IGPSAV----------------------AGPPARAPCHPASDSAAPCTAACAPWTWRQTC 252
G GPPA A D A T +T
Sbjct: 282 QGEQDAHQSRLPGQRERVGHVQQRAGQQEGPPAERHRARADDPAQRRRGRPPATTGPRTG 341
Query: 251 GSR*CGARAWGPAASAPAGCGRCCRRRACRRPCCRRPRRWPERRASASG--RP*RRGG-G 81
+ G GP SAP G R R R R CCR PE A+ +G RP G
Sbjct: 342 PAGPAGPA--GPRRSAP-GRARRIRARGSRCRCCRGAGVEPEGPANGAGAGRPTATSGYA 398
Query: 80 RPPQLHPAAPRPHPPTPAPPQHPVAP 3
RP P A P P PAP + P
Sbjct: 399 RPQHARPPARAPPGPRPAPTRAASTP 424
Score = 37.7 bits (86), Expect = 0.11
Identities = 58/195 (29%), Positives = 70/195 (35%), Gaps = 19/195 (9%)
Frame = +3
Query: 21 RRSRSWRMRTRSCRMQLRRAAAAAALRAAARARAALG--------PAAGATTARAATSAA 176
RR R+ R R CR A A R A G P A A
Sbjct: 360 RRIRARGSRCRCCRGAGVEPEGPANGAGAGRPTATSGYARPQHARPPARAPPGPRPAPTR 419
Query: 177 AATTAAPSGS*CCWTPSACAASSRTACLPPSPRSASSSTRSS*VRCW--MTRSASGRAC- 347
AA+T A +GS P+ A S PP +A + R + R+ G A
Sbjct: 420 AASTPARTGSRPASPPTRPTAPSPAPAAPPRAAAAPTPARRPPPPPTPPVPRARRGPAAG 479
Query: 348 NSRWTDTRWTTPAWRATWRACAA-------RPPP*R-PP*LPCGSRATSCCASCTPPAWP 503
N R TR T RA A RPPP R PP +R S A+ P P
Sbjct: 480 NGRPPSTRDRTAGTRAPASPPGAPPPVRRRRPPPPRAPPPHHPSARNPSARATPRPRPPP 539
Query: 504 RPAASRRRRPGRRRA 548
RP+A+ R P R A
Sbjct: 540 RPSAAARPEPPPRAA 554
Score = 37.0 bits (84), Expect = 0.19
Identities = 55/172 (31%), Positives = 66/172 (37%), Gaps = 24/172 (13%)
Frame = +1
Query: 121 RRSGQRRG-----RRQQGRRQARRRQQRPH--------PAG-ADAAGPQARAPH-----H 243
+R+GQ+ G R + A+RR+ RP PAG A AGP+ AP
Sbjct: 304 QRAGQQEGPPAERHRARADDPAQRRRGRPPATTGPRTGPAGPAGPAGPRRSAPGRARRIR 363
Query: 244 REPHVCRQVQGAQAAVHGAAESDAG*HGARAGGPATADGPIQGGQH--PPGGLRGGRAPR 417
CR +GA G A +GA AG P G + QH PP RAP
Sbjct: 364 ARGSRCRCCRGAGVEPEGPA------NGAGAGRPTATSGYAR-PQHARPP-----ARAPP 411
Query: 418 GLLPDVHLNCPAAAGRRAAAPAAR---RPHGRGRRPVAAGGRVGAGQRGAGA 564
G P A RAA+ AR RP RP A A R A A
Sbjct: 412 G---------PRPAPTRAASTPARTGSRPASPPTRPTAPSPAPAAPPRAAAA 454
Score = 36.6 bits (83), Expect = 0.24
Identities = 25/81 (30%), Positives = 30/81 (36%), Gaps = 1/81 (1%)
Frame = -3
Query: 557 APRCPAPTRPPAATGRRPRPCGRRAAGAAARRPAAAGQLRWTSGRRPRGARPPRSPPGGC 378
AP P PP R P P +AR P+A R RP A P PP
Sbjct: 495 APASPPGAPPPVRRRRPPPPRAPPPHHPSARNPSARATPRPRPPPRPSAAARPEPPPRAA 554
Query: 377 CPPC-IGPSAVAGPPARAPCH 318
P P +GP + +P H
Sbjct: 555 PGPSGTAPGPPSGPRSPSPLH 575
Score = 33.5 bits (75), Expect = 2.1
Identities = 53/179 (29%), Positives = 66/179 (36%), Gaps = 24/179 (13%)
Frame = +1
Query: 88 PRR*GRPLALARRSGQRRGRRQQGRRQARRRQQR---PHPAGADAAGPQARAPH------ 240
PRR R A RR+ Q+RG R + R + R R R PHP G + A H
Sbjct: 64 PRRGLRVPAPPRRTDQQRGHRHRQRVRLRERHLRGRQPHPRGQHEQRRRQVARHRPPLRP 123
Query: 241 HREPH----VCRQVQGAQAAV-----HG--AAESDAG*HGARAGGPATA----DGPIQGG 375
HR P RQ QG + V HG A+ HG P + +
Sbjct: 124 HRRPRRQHPAQRQHQGQERRVGHREPHGDERAQRSRQLHGQGHRVPPQSCPEQHRQRRHQ 183
Query: 376 QHPPGGLRGGRAPRGLLPDVHLNCPAAAGRRAAAPAARRPHGRGRRPVAAGGRVGAGQR 552
QH GGL G P+G PA R AP R R A + G G++
Sbjct: 184 QHQRGGLVRGE-PQG---------PARQPRDHGAPDHRGDREHRTRHPGARPQSGPGEQ 232
Score = 31.6 bits (70), Expect = 7.9
Identities = 54/187 (28%), Positives = 64/187 (33%), Gaps = 26/187 (13%)
Frame = +1
Query: 73 GGRPPPRR*GRPLALARRSGQRRGRRQQGRRQARRRQQRP---------------HPAGA 207
G R PP+ R +RG +G Q RQ R HP
Sbjct: 165 GHRVPPQSCPEQHRQRRHQQHQRGGLVRGEPQGPARQPRDHGAPDHRGDREHRTRHPGAR 224
Query: 208 DAAGP----QARAPHHREPHVCRQVQGAQAAVHGAAESDAG*HGARAGGPATADGPIQGG 375
+GP + RA H + RQ Q A G +G H R P A P + G
Sbjct: 225 PQSGPGEQRRQRAEHRVRGPLGRQRQQPGAHRPGHRSHQSG-HRHRRRAPLGAATPDRQG 283
Query: 376 QHP--PGGLRGGRAPRGLLPD--VHLNCPAAAGRRAAA--PAARRPHGRGRRPVAAGGRV 537
+ L G R G + P A RA A PA RR RGR P G R
Sbjct: 284 EQDAHQSRLPGQRERVGHVQQRAGQQEGPPAERHRARADDPAQRR---RGRPPATTGPRT 340
Query: 538 G-AGQRG 555
G AG G
Sbjct: 341 GPAGPAG 347
