Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002389A_C01 KCC002389A_c01
(551 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_343038.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Rattu... 117 1e-25
ref|NP_598801.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1; DEAD/... 113 2e-24
gb|AAH08570.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Mus mus... 113 2e-24
ref|NP_004930.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1; DEAD ... 113 2e-24
gb|AAL15417.1| DEAD box protein DDX1 [Gallus gallus] 112 3e-24
>ref|XP_343038.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Rattus norvegicus]
Length = 878
Score = 117 bits (293), Expect = 1e-25
Identities = 59/116 (50%), Positives = 81/116 (68%), Gaps = 7/116 (6%)
Frame = +2
Query: 176 RTTGRARAH-------RRGDSRVADTPLASMSAFEELGVMPELAKAVEDLGWMLPSPVQA 334
+ TGR RA + G + A M+AF E+GVMPE+A+AVE++ W+LP+ +QA
Sbjct: 109 KATGRKRASPWPRRVWKEGSTGPAAEECGKMAAFSEMGVMPEIAQAVEEMDWLLPTDIQA 168
Query: 335 EAIPLILGGGDVMAAAETGSGKTGAFAIPMLQIVHETLRQRARSGSAASTSGRGAA 502
E+IPLILGGGDV+ AAETGSGKTGAF+IP++QIV+ETL+ + +T GA+
Sbjct: 169 ESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKATIKTGAS 224
>ref|NP_598801.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1; DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 1 [Mus musculus]
gi|14714934|gb|AAH10624.1| DEAD (Asp-Glu-Ala-Asp) box
polypeptide 1 [Mus musculus] gi|26390412|dbj|BAC25893.1|
unnamed protein product [Mus musculus]
Length = 740
Score = 113 bits (282), Expect = 2e-24
Identities = 52/86 (60%), Positives = 71/86 (82%)
Frame = +2
Query: 245 MSAFEELGVMPELAKAVEDLGWMLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPM 424
M+AF E+GVMPE+A+AVE++ W+LP+ +QAE+IPLILGGGDV+ AAETGSGKTGAF+IP+
Sbjct: 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60
Query: 425 LQIVHETLRQRARSGSAASTSGRGAA 502
+QIV+ETL+ + +T GA+
Sbjct: 61 IQIVYETLKDQQEGKKGKTTIKTGAS 86
>gb|AAH08570.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Mus musculus]
Length = 740
Score = 113 bits (282), Expect = 2e-24
Identities = 52/86 (60%), Positives = 71/86 (82%)
Frame = +2
Query: 245 MSAFEELGVMPELAKAVEDLGWMLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPM 424
M+AF E+GVMPE+A+AVE++ W+LP+ +QAE+IPLILGGGDV+ AAETGSGKTGAF+IP+
Sbjct: 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60
Query: 425 LQIVHETLRQRARSGSAASTSGRGAA 502
+QIV+ETL+ + +T GA+
Sbjct: 61 IQIVYETLKDQQEGKKGKTTIKTGAS 86
>ref|NP_004930.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 1; DEAD box-1 [Homo sapiens]
gi|6919862|sp|Q92499|DDX1_HUMAN ATP-dependent helicase
DDX1 (DEAD-box protein 1) (DEAD-box
protein-retinoblastoma) (DBP-RB)
gi|3123574|emb|CAA49992.1| member of DEAD box protein
family [Homo sapiens] gi|15082428|gb|AAH12132.1| DEAD
(Asp-Glu-Ala-Asp) box polypeptide 1 [Homo sapiens]
gi|31565475|gb|AAH53673.1| DEAD (Asp-Glu-Ala-Asp) box
polypeptide 1 [Homo sapiens]
Length = 740
Score = 113 bits (282), Expect = 2e-24
Identities = 52/86 (60%), Positives = 71/86 (82%)
Frame = +2
Query: 245 MSAFEELGVMPELAKAVEDLGWMLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPM 424
M+AF E+GVMPE+A+AVE++ W+LP+ +QAE+IPLILGGGDV+ AAETGSGKTGAF+IP+
Sbjct: 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60
Query: 425 LQIVHETLRQRARSGSAASTSGRGAA 502
+QIV+ETL+ + +T GA+
Sbjct: 61 IQIVYETLKDQQEGKKGKTTIKTGAS 86
>gb|AAL15417.1| DEAD box protein DDX1 [Gallus gallus]
Length = 740
Score = 112 bits (281), Expect = 3e-24
Identities = 52/86 (60%), Positives = 70/86 (80%)
Frame = +2
Query: 245 MSAFEELGVMPELAKAVEDLGWMLPSPVQAEAIPLILGGGDVMAAAETGSGKTGAFAIPM 424
M+AF E+GVMPE+A+AVE++ W+LP+ +QAE+IPLILGGGDV+ AAETGSGKTGAF+IP+
Sbjct: 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60
Query: 425 LQIVHETLRQRARSGSAASTSGRGAA 502
+QIV+ETL+ + +T G A
Sbjct: 61 IQIVYETLKDQMEGKKGKATIKTGGA 86
