Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002388A_C01 KCC002388A_c01
(538 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00051359.1| COG3547: Transposase and inactivated derivati... 35 0.48
ref|XP_219352.2| similar to hypothetical protein MGC13138 [Rattu... 34 1.1
ref|ZP_00015890.1| COG3200: 3-deoxy-D-arabino-heptulosonate 7-ph... 34 1.1
ref|XP_341780.1| similar to zinc finger protein [Rattus norvegicus] 34 1.1
ref|NP_739565.1| zinc finger protein; zinc finger protein Zec; c... 34 1.1
>ref|ZP_00051359.1| COG3547: Transposase and inactivated derivatives [Magnetospirillum
magnetotacticum]
Length = 235
Score = 35.4 bits (80), Expect = 0.48
Identities = 28/89 (31%), Positives = 40/89 (44%)
Frame = +3
Query: 48 NAQAGLGALLRAVRSALTARTSYKALAPYKRPVEVMRSHISAAAAAAGRCGPFCGFGRIR 227
N AG+ L+ AV S R + +A+ PY PV + +SAA G P R
Sbjct: 74 NTPAGIRDLIAAVTSRGVQRVALEAIGPYAYPV---TAALSAAGLPVGLVDP-------R 123
Query: 228 LVQMFSVLVVLLAGTRASNAAATGRLAQR 314
++ F ++A T +AA R AQR
Sbjct: 124 RIRAFRTAEGVIAKTDRLDAALIARFAQR 152
>ref|XP_219352.2| similar to hypothetical protein MGC13138 [Rattus norvegicus]
Length = 1248
Score = 34.3 bits (77), Expect = 1.1
Identities = 24/83 (28%), Positives = 32/83 (37%)
Frame = -2
Query: 384 HSYPIHTCMWP*HQAHCRRTE*SGAALGDQ*RRRCSREYPPGAPLALRTFGRAECAQSRK 205
H +H+ M P HC R A L R E P P R F + + +
Sbjct: 453 HQRVVHSGMTPFSCTHCGRAFARAAYLRCHMRTHTG-EKPYSCPDCGRCFRQGSDMAAHR 511
Query: 204 TVHSGQQPRPLQICGSA*PRRGA 136
HSG++P P CG P + A
Sbjct: 512 RTHSGERPYPCPQCGRGFPTKSA 534
>ref|ZP_00015890.1| COG3200: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP)
synthase [Rhodospirillum rubrum]
Length = 703
Score = 34.3 bits (77), Expect = 1.1
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -2
Query: 387 THSYPIHTCMWP*HQAHCRRTE*SGAALGDQ*RRRCSREYPPGAPLALRTFGRAE-CAQS 211
+H H C W H+ H R + G GD+ R + Y PG L R FGR + A
Sbjct: 3 SHHCRHHLCHWRRHRPH--RPDPGGDQRGDRLRPHRVQRYAPGDGLRERGFGRVQPAAGG 60
Query: 210 RKTVHSGQQPRP 175
G PRP
Sbjct: 61 NGGADRGAGPRP 72
>ref|XP_341780.1| similar to zinc finger protein [Rattus norvegicus]
Length = 730
Score = 34.3 bits (77), Expect = 1.1
Identities = 26/86 (30%), Positives = 35/86 (40%)
Frame = -2
Query: 279 SREYPPGAPLALRTFGRAECAQSRKTVHSGQQPRPLQICGSA*PRRGACKAQALCKRFAL 100
S E P + F C + + VH+G++P +CG + AQ R
Sbjct: 253 SGERPYACTECGKAFRNTSCLRRHRHVHTGERPHSCSVCGKS-------FAQTSNLRQHQ 305
Query: 99 *VHSGPREVRRQDLPAR*SKVFTHSS 22
VH+G R R P K FTHSS
Sbjct: 306 RVHTGERPFRCPLCP----KTFTHSS 327
>ref|NP_739565.1| zinc finger protein; zinc finger protein Zec; cDNA sequence
AF435832 [Mus musculus]
gi|24637216|gb|AAN63612.1|AF435832_1 zinc finger protein
[Mus musculus]
Length = 1031
Score = 34.3 bits (77), Expect = 1.1
Identities = 26/86 (30%), Positives = 35/86 (40%)
Frame = -2
Query: 279 SREYPPGAPLALRTFGRAECAQSRKTVHSGQQPRPLQICGSA*PRRGACKAQALCKRFAL 100
S E P + F C + + VH+G++P +CG + AQ R
Sbjct: 518 SGERPYACTECGKAFRNTSCLRRHRHVHTGERPHSCSVCGKS-------FAQTSNLRQHQ 570
Query: 99 *VHSGPREVRRQDLPAR*SKVFTHSS 22
VH+G R R P K FTHSS
Sbjct: 571 RVHTGERPFRCPLCP----KTFTHSS 592
Score = 31.2 bits (69), Expect = 9.0
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = -2
Query: 288 RRCSREYPPGAPLALRTFGRAECAQSRKTVHSGQQPRPLQICGSA*PRRGACKAQALCKR 109
R+ + E P P + F + + + VH+G++P ICG + Q+ R
Sbjct: 131 RQHTGERPYPCPDCPKAFKNSSSLRRHRHVHTGERPYTCGICGKS-------FTQSTNLR 183
Query: 108 FAL*VHSGPREVRRQDLPAR*SKVFTHSS 22
VH+G R R P K FTHSS
Sbjct: 184 QHQRVHTGERPFRCPLCP----KTFTHSS 208
