KCC002385A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002385A_C01 KCC002385A_c01
gcggcctgcgagaccatgggcggcgctaccgccatctgctccgacaagaccggcacgctg
acggagaaccgcatgacggtGGTGGAGGGCTGGTTCGCGGGCCAGCAGTTTGACCACCTG
CCCGACCCCAGCGAGCTGCCGCGCGAGGTGTGCGACGAGCTGAAGCTCAACTGCGCGCTG
AACAGCAAGGCCTTTGTGATTGAGGCCGGCCCCAAGGTGGACTTTGTCGGCAACCGCACA
GAGTGCGCGCTGCTCATGATGATCAAGACCTGGGGCTGCACCTACACCGCCGTGCGCGAG
GAGTACGAGGCGTCCGTCTACAAGATGTTTGGCTTCTCCTCCTCCAAGAAGATGGCCTCC
TGCAGCGTCAAATTCGCCGACAAGTTCCGCCACTACAACAAGGGCGCTGCGGAGTGGGTG
CTCAAGCGCTGCACCAGCATGTACAACGGCAGCCAGATCGTGCAGATGGGCGACGCGGAG
CGCGAGAAGCTGGTGGAGGTGGTGAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002385A_C01 KCC002385A_c01
         (506 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T18294 Ca2+-transporting ATPase (EC 3.6.3.8) - Entamoeba hi...   118  4e-26
gb|AAK11273.1| PMCA2av [Rana catesbeiana]                             115  3e-25
sp|Q01814|ATB2_HUMAN Plasma membrane calcium-transporting ATPase...   114  9e-25
gb|AAA36456.1| Ca2+-ATPase                                            114  9e-25
ref|NP_001674.1| ATPase, Ca++ transporting, plasma membrane 2 [H...   113  2e-24

>pir||T18294 Ca2+-transporting ATPase (EC 3.6.3.8) - Entamoeba histolytica
           gi|3392885|gb|AAC28745.1| putative plasma membrane
           calcium ion-transporting ATPase [Entamoeba histolytica]
          Length = 1086

 Score =  118 bits (296), Expect = 4e-26
 Identities = 67/170 (39%), Positives = 101/170 (59%), Gaps = 6/170 (3%)
 Frame = +1

Query: 7   CETMGGATAICSDKTGTLTENRMTVVEGWFAGQQFDHLPDPSELPREVCDELKLNCALNS 186
           CETM   T ICSDKTGTLTENRMTVV GWF G + +      +  + +   + +N ++NS
Sbjct: 417 CETMSNCTNICSDKTGTLTENRMTVVNGWFGGIKMETRDQKFQFLKNMKKLINMNISINS 476

Query: 187 --KAFVIEAGPKVDFVGNRTECALLMMIKTWGCTYTAVREEYEASVYKMFGFSSSKKMAS 360
                +I    +++ +GN+TE ALLM +K  G  Y  +R+  E ++Y+MF FSS+KK  +
Sbjct: 477 SPSTTLISENGQINVIGNKTEGALLMYVKERGVDYLEIRKRNENNIYQMFAFSSAKKRMN 536

Query: 361 CSVKFADK---FRHYNKGAAEWVLKRCTSMYNG-SQIVQMGDAEREKLVE 498
             V + DK    R + KGA E +L++C    NG  +I ++ +  R++L E
Sbjct: 537 TLV-WIDKPNTIRMFTKGAPEMILEKCQYYMNGQGEIKEITEEVRQELEE 585

>gb|AAK11273.1| PMCA2av [Rana catesbeiana]
          Length = 1213

 Score =  115 bits (288), Expect = 3e-25
 Identities = 71/175 (40%), Positives = 100/175 (56%), Gaps = 8/175 (4%)
 Frame = +1

Query: 4    ACETMGGATAICSDKTGTLTENRMTVVEGWFAGQQFDHLPDPSELPREVCDEL----KLN 171
            ACETMG ATAICSDKTGTLT NRMTVV+ +     +  +PDP  +  +  D L     +N
Sbjct: 500  ACETMGNATAICSDKTGTLTTNRMTVVQAYVGDVHYKEIPDPGSISAKTLDVLVNAIAIN 559

Query: 172  CALNSKAFVIE-AGPKVDFVGNRTECALLMMIKTWGCTYTAVREEY-EASVYKMFGFSSS 345
             A  SK    E  G     VGN+TEC LL  +      Y AVR    E  +YK++ F+S+
Sbjct: 560  SAYTSKVLPAEKEGGLKRQVGNKTECGLLGFVLDLKRDYQAVRANIPEEKLYKVYTFNSA 619

Query: 346  KKMASCSVKFAD-KFRHYNKGAAEWVLKRCTSMYNGSQIVQM-GDAEREKLVEVV 504
            +K  S  VK  D  +R Y+KGA+E +LK+C+ +  G    ++    +R+++V+ V
Sbjct: 620  RKSMSTVVKLEDGSYRMYSKGASEIILKKCSQIQGGDGETRLFRPRDRDEMVKKV 674

>sp|Q01814|ATB2_HUMAN Plasma membrane calcium-transporting ATPase 2 (PMCA2) (Plasma
           membrane calcium pump isoform 2) (Plasma membrane
           calcium ATPase isoform 2) gi|2193884|emb|CAA45131.1|
           plasma membrane calcium ATPase [Homo sapiens]
          Length = 1243

 Score =  114 bits (284), Expect = 9e-25
 Identities = 67/157 (42%), Positives = 93/157 (58%), Gaps = 7/157 (4%)
 Frame = +1

Query: 4   ACETMGGATAICSDKTGTLTENRMTVVEGWFAGQQFDHLPDPSELPRE----VCDELKLN 171
           ACETMG ATAICSDKTGTLT NRMTVV+ +     +  +PDPS +  +    + + + +N
Sbjct: 486 ACETMGNATAICSDKTGTLTTNRMTVVQAYVGDVHYKEIPDPSSINTKTMELLINAIAIN 545

Query: 172 CALNSKAFVIE-AGPKVDFVGNRTECALLMMIKTWGCTYTAVREEY-EASVYKMFGFSSS 345
            A  +K    E  G     VGN+TEC LL  +      Y  VR +  E  +YK++ F+S 
Sbjct: 546 SAYTTKILPPEKEGALPRQVGNKTECGLLGFVLDLKQDYEPVRSQMPEEKLYKVYTFNSV 605

Query: 346 KKMASCSVKFADK-FRHYNKGAAEWVLKRCTSMYNGS 453
           +K  S  +K  D+ FR Y+KGA+E VLK+C  + NG+
Sbjct: 606 RKSMSTVIKLPDESFRMYSKGASEIVLKKCCKILNGA 642

>gb|AAA36456.1| Ca2+-ATPase
          Length = 1198

 Score =  114 bits (284), Expect = 9e-25
 Identities = 67/157 (42%), Positives = 93/157 (58%), Gaps = 7/157 (4%)
 Frame = +1

Query: 4   ACETMGGATAICSDKTGTLTENRMTVVEGWFAGQQFDHLPDPSELPRE----VCDELKLN 171
           ACETMG ATAICSDKTGTLT NRMTVV+ +     +  +PDPS +  +    + + + +N
Sbjct: 441 ACETMGNATAICSDKTGTLTTNRMTVVQAYVGDVHYKEIPDPSSINTKTMELLINAIAIN 500

Query: 172 CALNSKAFVIE-AGPKVDFVGNRTECALLMMIKTWGCTYTAVREEY-EASVYKMFGFSSS 345
            A  +K    E  G     VGN+TEC LL  +      Y  VR +  E  +YK++ F+S 
Sbjct: 501 SAYTTKILPPEKEGALPRQVGNKTECGLLGFVLDLKQDYEPVRSQMPEEKLYKVYTFNSV 560

Query: 346 KKMASCSVKFADK-FRHYNKGAAEWVLKRCTSMYNGS 453
           +K  S  +K  D+ FR Y+KGA+E VLK+C  + NG+
Sbjct: 561 RKSMSTVIKLPDESFRMYSKGASEIVLKKCCKILNGA 597

>ref|NP_001674.1| ATPase, Ca++ transporting, plasma membrane 2 [Homo sapiens]
           gi|179734|gb|AAA51893.1| plasma membrane calcium ATPase
           isoform 2 gi|404702|gb|AAA50877.1| plasma membrane
           calcium ATPase isoform 2
          Length = 1198

 Score =  113 bits (282), Expect = 2e-24
 Identities = 67/157 (42%), Positives = 93/157 (58%), Gaps = 7/157 (4%)
 Frame = +1

Query: 4   ACETMGGATAICSDKTGTLTENRMTVVEGWFAGQQFDHLPDPSELPRE----VCDELKLN 171
           ACETMG ATAICSDKTGTLT NRMTVV+ +     +  +PDPS +  +    + + + +N
Sbjct: 441 ACETMGNATAICSDKTGTLTTNRMTVVQAYVDDVHYKEIPDPSSINTKTMELLINAIAIN 500

Query: 172 CALNSKAFVIE-AGPKVDFVGNRTECALLMMIKTWGCTYTAVREEY-EASVYKMFGFSSS 345
            A  +K    E  G     VGN+TEC LL  +      Y  VR +  E  +YK++ F+S 
Sbjct: 501 SAYTTKILPPEKEGALPRQVGNKTECGLLGFVLDLKQDYEPVRSQMPEEKLYKVYTFNSV 560

Query: 346 KKMASCSVKFADK-FRHYNKGAAEWVLKRCTSMYNGS 453
           +K  S  +K  D+ FR Y+KGA+E VLK+C  + NG+
Sbjct: 561 RKSMSTVIKLPDESFRMYSKGASEIVLKKCCKILNGA 597



EST assemble image


clone accession position
1 MXL009c05_r BP093499 1 415
2 MXL066h09_r BP096910 42 375




Chlamydomonas reinhardtii
Kazusa DNA Research Institute