KCC002380A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002380A_C01 KCC002380A_c01
ctactCTTCAGGCTAAGAGCCGCGCTGCGGCCAGCTCCGCTCGCTCGGAGAAGGCTGTCC
CGGCGAGCTTCTCGAGCGGGTCCTTCCGTGGCCAGGCCGTGGCTCGCCCCGCTGCCACCC
GTGCTGTGCGCTCGGTTGCTGCTCGCTCTCGTCGCGCCCAGGCCGTGAAGGCGATTATTG
AGGCGCCTCTGCTGCGCTATGAGCCGGCCACCAAGGCCCGCACCAGCTCGGTGCTGTCCA
TCATTCTGGGTGGCGGCGCCGGCACCCGCCTGTTCCCGCTGACCAAGTCGCGCGCCAAGC
CGGCCGTGCCCATCGGCGGCGCCTACCGCCTGATCGACGTGCCCATGAGCAACTGCATCA
ACAGCGGCATCAGCAAGATCTACATCCTGACCCAGTTCAACTCGACCTCCCTGAACCGCC
ACCTGGGTCGCGCCTACAACATGGGCAGCGGCGTGCGCTTCGGCGGCGACGGCTTTGTGG
AGGTGCTGGCGGCCACCCAGACGCCCACCGACAATGGAGTGGTTCCAGTGGCACCGCCGA
CGCCGTGCGCCAGTACAGCTGGCTGCTGGAGGACACCAAGAACCGCGCCATCGAGGACGT
GCTCATCCTGTCGGGCGACCACCTGTACCGCATGGACTACATGAAGTTCGTGAACTACCA
CCGCGAGACCAACGCCGACATCACCATCGGCTGCATCGCCTACGGCTCGGACCGCGCCAA
GGAGTTCGGCCTGATGAAGATCGACGAGAAGCGCCGCGTGACGTCGTTCGCGGAGAAGCC
CAAGACCCAGGAGGCGCTGGACGCCATGAAGGTGGACACCACCGTGCTGGGCCTGACCCC
CGAGGAGGCTGCTGAGAAGCCGTACATCGCCTCCATGGGCATCTA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002380A_C01 KCC002380A_c01
         (885 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T08176 glucose-1-phosphate adenylyltransferase (EC 2.7.7.27...   236  e-111
gb|AAK27718.1|AF356002_1 ADP-glucose pyrophosphorylase [Cicer ar...   168  6e-83
gb|AAM95945.1| ADP-glucose pyrophosphorylase large subunit [Onci...   164  5e-80
pir||T07674 glucose-1-phosphate adenylyltransferase (EC 2.7.7.27...   162  6e-80
ref|NP_174089.1| glucose-1-phosphate adenylyltransferase, large ...   161  8e-79

>pir||T08176 glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) large chain,
           precursor - Chlamydomonas reinhardtii
           gi|1149717|emb|CAA62861.1| glucose-1-phosphate
           adenylyltransferase [Chlamydomonas reinhardtii]
          Length = 289

 Score =  236 bits (603), Expect(2) = e-111
 Identities = 106/107 (99%), Positives = 106/107 (99%)
 Frame = +1

Query: 532 HRRRRAPVQLAAGGHQEPRHRGRAHPVGRPPVPHGLHEVRELPPRDQRRHHHRLHRLRLG 711
           HRRRR PVQLAAGGHQEPRHRGRAHPVGRPPVPHGLHEVRELPPRDQRRHHHRLHRLRLG
Sbjct: 183 HRRRRGPVQLAAGGHQEPRHRGRAHPVGRPPVPHGLHEVRELPPRDQRRHHHRLHRLRLG 242

Query: 712 PRQGVRPDEDRREAPRDVVRGEAQDPGGAGRHEGGHHRAGPDPRGGC 852
           PRQGVRPDEDRREAPRDVVRGEAQDPGGAGRHEGGHHRAGPDPRGGC
Sbjct: 243 PRQGVRPDEDRREAPRDVVRGEAQDPGGAGRHEGGHHRAGPDPRGGC 289

 Score =  189 bits (481), Expect(2) = e-111
 Identities = 90/100 (90%), Positives = 92/100 (92%)
 Frame = +2

Query: 215 GPHQLGAVHHSGWRRRHPPVPADQVARQAGRAHRRRLPPDRRAHEQLHQQRHQQDLHPDP 394
           GP ++GA  H     RHPPVPADQVARQAGRAHRRRLPPDRRAHEQLHQQRHQQDLHPDP
Sbjct: 79  GP-EVGAGDHRIQAYRHPPVPADQVARQAGRAHRRRLPPDRRAHEQLHQQRHQQDLHPDP 137

Query: 395 VQLDLPEPPPGSRLQHGQRRALRRRRLCGGAGGHPDAHRQ 514
           VQLDLPEPPPGSRLQHGQRRALRRRRLCGGAGGHPDAHRQ
Sbjct: 138 VQLDLPEPPPGSRLQHGQRRALRRRRLCGGAGGHPDAHRQ 177

 Score = 41.6 bits (96), Expect = 0.018
 Identities = 39/114 (34%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
 Frame = +1

Query: 532 HRRRRAPVQLAAGGHQEPRHRGRAHPVGRPPVPHGLHEVRELPPRDQRRHHHR--LHRLR 705
           HRRR  P + A     + RH+   HP    PV   L E    PP  + +H  R  L R R
Sbjct: 110 HRRRLPPDRRAHEQLHQQRHQQDLHP---DPVQLDLPEP---PPGSRLQHGQRRALRRRR 163

Query: 706 L---------GPRQGVRPDEDRREAPRDVVRGEAQDPGGAGRHEGGHHRAGPDP 840
           L           RQGV P   RR  P  +  G  Q+P    RH G  H  G  P
Sbjct: 164 LCGGAGGHPDAHRQGVVPGHRRRRGPVQLAAGGHQEP----RHRGRAHPVGRPP 213

 Score = 34.3 bits (77), Expect = 2.8
 Identities = 31/105 (29%), Positives = 40/105 (37%), Gaps = 4/105 (3%)
 Frame = +2

Query: 212 QGPHQLGAVHHSGWRRRHPPVPADQVARQAGRAHRRRLPP--DRRAHEQLHQQR--HQQD 379
           +GP QL A  H   R R    P  +     G    R LPP   RR H +LH+ R   +Q 
Sbjct: 187 RGPVQLAAGGHQEPRHRGRAHPVGRPPVPHGLHEVRELPPRDQRRHHHRLHRLRLGPRQG 246

Query: 380 LHPDPVQLDLPEPPPGSRLQHGQRRALRRRRLCGGAGGHPDAHRQ 514
           + PD  + + P        Q             GGAG H   H +
Sbjct: 247 VRPDEDRREAPRDVVRGEAQDP-----------GGAGRHEGGHHR 280

>gb|AAK27718.1|AF356002_1 ADP-glucose pyrophosphorylase [Cicer arietinum]
          Length = 525

 Score =  168 bits (425), Expect(2) = 6e-83
 Identities = 96/177 (54%), Positives = 119/177 (66%), Gaps = 5/177 (2%)
 Frame = +3

Query: 3   TLQAKSRAAASSARSEKAVPASFSSGSFRGQAVARPAATRAVRSVAARSRRAQAVKAIIE 182
           T+Q +      S R+ + V   F +G   G+ +   A   A+ +   ++   Q +   + 
Sbjct: 14  TVQLREPTIMGSTRNLRFV--KFCNGEIMGRKIELKAGG-AISNCCTKNVIRQNISMSLT 70

Query: 183 APL-----LRYEPATKARTSSVLSIILGGGAGTRLFPLTKSRAKPAVPIGGAYRLIDVPM 347
           A +     LR     K   S+V++IILGGGAGTRLFPLTK RAKPAVPIGGAYRLIDVPM
Sbjct: 71  ADVAAESKLRNVDLEKRDPSTVVAIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPM 130

Query: 348 SNCINSGISKIYILTQFNSTSLNRHLGRAYNMGSGVRFGGDGFVEVLAATQTPTDNG 518
           SNCINSGI+K+YILTQFNS SLNRH+ RAYN G+GV F GDG+VEVLAATQTP + G
Sbjct: 131 SNCINSGINKVYILTQFNSASLNRHIARAYNSGTGVTF-GDGYVEVLAATQTPGEQG 186

 Score =  162 bits (411), Expect(2) = 6e-83
 Identities = 80/118 (67%), Positives = 95/118 (79%)
 Frame = +2

Query: 530 GTADAVRQYSWLLEDTKNRAIEDVLILSGDHLYRMDYMKFVNYHRETNADITIGCIAYGS 709
           GTADAVRQ+ WL ED +++ IEDVLILSGDHLYRMDYM FV  HRE+ ADIT+ C+    
Sbjct: 192 GTADAVRQFHWLFEDARSKDIEDVLILSGDHLYRMDYMDFVQNHRESGADITLSCLPMDD 251

Query: 710 DRAKEFGLMKIDEKRRVTSFAEKPKTQEALDAMKVDTTVLGLTPEEAAEKPYIASMGI 883
            RA +FGLMKID K RV SF+EKPK ++ L AM+VDTTVLGL+ +EA EKPYIASMG+
Sbjct: 252 SRASDFGLMKIDNKGRVLSFSEKPKGED-LKAMQVDTTVLGLSKDEALEKPYIASMGV 308

>gb|AAM95945.1| ADP-glucose pyrophosphorylase large subunit [Oncidium cv.
           'Goldiana']
          Length = 517

 Score =  164 bits (414), Expect(2) = 5e-80
 Identities = 96/174 (55%), Positives = 115/174 (65%), Gaps = 6/174 (3%)
 Frame = +3

Query: 15  KSRAAASSARSEK-AVPASFSSGSFRGQAVARPAATRAVRSVAARSRRAQ-----AVKAI 176
           KS+ A S+A  +  A    FS G   GQ +   +  RA   +  R R +      A   +
Sbjct: 6   KSQIALSAAVLQPHAGSGRFSDGETMGQRLDFSSFRRANEQICRRRRASLLRMSFATTEL 65

Query: 177 IEAPLLRYEPATKARTSSVLSIILGGGAGTRLFPLTKSRAKPAVPIGGAYRLIDVPMSNC 356
           +    LR          +V+++ILGGGAGTRLFPLT+ RAKPAVPIGGAYRLIDVPMSNC
Sbjct: 66  VAEGKLRDLELEGRDPRTVVAVILGGGAGTRLFPLTRQRAKPAVPIGGAYRLIDVPMSNC 125

Query: 357 INSGISKIYILTQFNSTSLNRHLGRAYNMGSGVRFGGDGFVEVLAATQTPTDNG 518
           INSGI+K+YILTQFNS SLNRHL RAYN  +G+ F GDGFVEVLAATQTP + G
Sbjct: 126 INSGINKVYILTQFNSASLNRHLLRAYNFSNGIGF-GDGFVEVLAATQTPGEAG 178

 Score =  157 bits (397), Expect(2) = 5e-80
 Identities = 80/128 (62%), Positives = 97/128 (75%)
 Frame = +2

Query: 500 DAHRQWSGSSGTADAVRQYSWLLEDTKNRAIEDVLILSGDHLYRMDYMKFVNYHRETNAD 679
           +A ++W    GTADAVRQ+ WL ED K + IEDVLILSGDHLYRMDYM FV  HR++ AD
Sbjct: 176 EAGKKWF--QGTADAVRQFHWLFEDAKGKEIEDVLILSGDHLYRMDYMDFVQSHRQSGAD 233

Query: 680 ITIGCIAYGSDRAKEFGLMKIDEKRRVTSFAEKPKTQEALDAMKVDTTVLGLTPEEAAEK 859
           ITI C+     RA +FGLMKID   RV SF+EKPK QE L AM+VDT+VLGL+ E+A + 
Sbjct: 234 ITISCVPMDVSRASDFGLMKIDNNGRVLSFSEKPKGQE-LKAMEVDTSVLGLSREQAKKT 292

Query: 860 PYIASMGI 883
           P+IASMG+
Sbjct: 293 PFIASMGV 300

>pir||T07674 glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) isoform L3
           large chain - tomato gi|1840116|gb|AAC49943.1|
           ADP-glucose pyrophosphorylase large subunit
           [Lycopersicon esculentum]
          Length = 516

 Score =  162 bits (410), Expect(2) = 6e-80
 Identities = 81/104 (77%), Positives = 90/104 (85%)
 Frame = +3

Query: 207 ATKARTSSVLSIILGGGAGTRLFPLTKSRAKPAVPIGGAYRLIDVPMSNCINSGISKIYI 386
           A K    +V++IILGGG GTRLFPLTK RAKPAVPIGGAYRLIDVPMSNCINSGI+K+YI
Sbjct: 74  AKKEDARTVVAIILGGGGGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYI 133

Query: 387 LTQFNSTSLNRHLGRAYNMGSGVRFGGDGFVEVLAATQTPTDNG 518
           LTQFNS SLNRH+ RAYN G+GV F GDG+VEVLAATQTP + G
Sbjct: 134 LTQFNSASLNRHIARAYNFGNGVTF-GDGYVEVLAATQTPGELG 176

 Score =  158 bits (400), Expect(2) = 6e-80
 Identities = 79/118 (66%), Positives = 93/118 (77%)
 Frame = +2

Query: 530 GTADAVRQYSWLLEDTKNRAIEDVLILSGDHLYRMDYMKFVNYHRETNADITIGCIAYGS 709
           GTADAVRQ+ WL ED +++ IEDVLILSGDHLYRMDY+ FV  HR++ ADITI  +    
Sbjct: 182 GTADAVRQFHWLFEDARSKDIEDVLILSGDHLYRMDYLHFVQSHRQSGADITISSLPIDD 241

Query: 710 DRAKEFGLMKIDEKRRVTSFAEKPKTQEALDAMKVDTTVLGLTPEEAAEKPYIASMGI 883
            RA +FGLMKID+  RV SF+EKPK  + L AM VDTTVLGL+PEEA EKPYIASMG+
Sbjct: 242 SRASDFGLMKIDDTGRVMSFSEKPKGDD-LKAMAVDTTVLGLSPEEAKEKPYIASMGV 298

>ref|NP_174089.1| glucose-1-phosphate adenylyltransferase, large subunit 2,
           chloroplast  (ADP-glucose pyrophosphorylase) (APL2)
           [Arabidopsis thaliana] gi|12644324|sp|P55230|GLG2_ARATH
           Glucose-1-phosphate adenylyltransferase large subunit 2,
           chloroplast precursor (ADP-glucose synthase)
           (ADP-glucose pyrophosphorylase) (AGPASE S)
           (Alpha-D-glucose-1-phosphate adenyl transferase)
           gi|25288667|pir||G86401 protein T22C5.13 [imported] -
           Arabidopsis thaliana gi|6693019|gb|AAF24945.1|AC012375_8
           T22C5.13 [Arabidopsis thaliana]
           gi|17380942|gb|AAL36283.1| putative ADP-glucose
           pyrophosphorylase [Arabidopsis thaliana]
           gi|20258949|gb|AAM14190.1| putative ADP-glucose
           pyrophosphorylase [Arabidopsis thaliana]
          Length = 518

 Score =  161 bits (408), Expect(2) = 8e-79
 Identities = 91/156 (58%), Positives = 107/156 (68%), Gaps = 10/156 (6%)
 Frame = +3

Query: 81  SFRGQAVARPAATRAVRSVAARSRRAQA--VKAII--------EAPLLRYEPATKARTSS 230
           +F G  V +P   R  +  +A  ++ Q   +++++          PLLR +    A   +
Sbjct: 28  AFWGTQVVKPNHLRTTKLRSAPQKKIQTNLIRSVLTPFVDQESHEPLLRTQ---NADPKN 84

Query: 231 VLSIILGGGAGTRLFPLTKSRAKPAVPIGGAYRLIDVPMSNCINSGISKIYILTQFNSTS 410
           V SIILGGGAGTRLFPLT  RAKPAVPIGG YRLID+PMSNCINSGI KI+ILTQFNS S
Sbjct: 85  VASIILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFS 144

Query: 411 LNRHLGRAYNMGSGVRFGGDGFVEVLAATQTPTDNG 518
           LNRHL R YN G+GV F GDGFVEVLAATQT  D G
Sbjct: 145 LNRHLSRTYNFGNGVNF-GDGFVEVLAATQTSGDAG 179

 Score =  155 bits (392), Expect(2) = 8e-79
 Identities = 75/128 (58%), Positives = 96/128 (74%)
 Frame = +2

Query: 500 DAHRQWSGSSGTADAVRQYSWLLEDTKNRAIEDVLILSGDHLYRMDYMKFVNYHRETNAD 679
           DA ++W    GTADAVRQ+ W+ ED K + +E VLILSGDHLYRMDYM FV  H E+NAD
Sbjct: 177 DAGKKWF--QGTADAVRQFIWVFEDAKTKNVEHVLILSGDHLYRMDYMNFVQKHIESNAD 234

Query: 680 ITIGCIAYGSDRAKEFGLMKIDEKRRVTSFAEKPKTQEALDAMKVDTTVLGLTPEEAAEK 859
           IT+ C+     RA +FGL+KID+  ++  F+EKPK  + L AM+VDT++LGL P+EAAE 
Sbjct: 235 ITVSCLPMDESRASDFGLLKIDQSGKIIQFSEKPKGDD-LKAMQVDTSILGLPPKEAAES 293

Query: 860 PYIASMGI 883
           PYIASMG+
Sbjct: 294 PYIASMGV 301



EST assemble image


clone accession position
1 MXL096g10_r BP098641 1 471
2 MXL081a06_r BP097768 6 489
3 HCL025h10_r AV640996 22 468
4 MXL100f10_r BP098879 314 755
5 MXL040g09_r BP095373 495 885




Chlamydomonas reinhardtii
Kazusa DNA Research Institute