KCC002374A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002374A_C01 KCC002374A_c01
aactacgctgGGCACACACATCTTTTTGGGTAGGGCTCTTACGGTAGCCAAATTCTTATA
GAGTTTGGGGAGTGCGGGTAGCACTCAAAAATGTGCGGCATTCTTGCCGTCCTCAACACG
ACGGATGACAGCCAGGCTATGCGCTCGAGGGTGCTGGCCCTGAGCCGTCGCCAGCGTCAC
CGTGGCCCCGACTGGTCTGGCATGCACCAGTTCGGCAACAACTTCCTTGCCCATGAGCGC
CTTGCGATTATGGACCCCGCCTCGGGTGACCAGCCCCTGTTCAACGAGGACCGCACAATC
GTGGTCACCGTGAACGGTGAGATCTACAACTACAAGGAGCTGCGCCAGCAGATCACGGAT
GCCTGCCCCGGCAAGAAGTTCGCCACCAACAGCGATTGCGAGGTGATTAGCCACCTGTAC
GAGCTGCACGGCGAGAAGGTGGCCTCCATGCTGGACGGCTTCTTCGCCTTCGTGGTGCTG
GACACCCGCAACAACACCTTCTACGCCGCGCGCGAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002374A_C01 KCC002374A_c01
         (516 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF02775.1|AF190728_1 asparagine synthetase [Helianthus annuus]    212  2e-54
sp|P19251|ASN1_PEA Asparagine synthetase, nodule [glutamine-hydr...   206  1e-52
sp|P49093|ASN2_LOTJA Asparagine synthetase [glutamine-hydrolyzin...   206  1e-52
pir||JW0071 asparagine synthase (glutamine-hydrolysing) (EC 6.3....   206  1e-52
gb|AAO38524.1| asparagine synthetase [Securigera parviflora]          206  1e-52

>gb|AAF02775.1|AF190728_1 asparagine synthetase [Helianthus annuus]
          Length = 591

 Score =  212 bits (540), Expect = 2e-54
 Identities = 102/142 (71%), Positives = 122/142 (85%)
 Frame = +1

Query: 91  MCGILAVLNTTDDSQAMRSRVLALSRRQRHRGPDWSGMHQFGNNFLAHERLAIMDPASGD 270
           MCGILAVL  +DDSQA R RVL LSRR +HRGPDWSG++Q G+N+L+H+RLAI+DPASGD
Sbjct: 1   MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLYQHGDNYLSHQRLAIIDPASGD 60

Query: 271 QPLFNEDRTIVVTVNGEIYNYKELRQQITDACPGKKFATNSDCEVISHLYELHGEKVASM 450
           QPLFNED+TIVVTVNGEIYN++ELR+++T A  G KF T SDC+VI+HLYE HGE    M
Sbjct: 61  QPLFNEDQTIVVTVNGEIYNHEELRKRLTAA--GHKFRTGSDCDVIAHLYEEHGEDFVDM 118

Query: 451 LDGFFAFVVLDTRNNTFYAARD 516
           LDG F+FV+LDTRNNT+ AARD
Sbjct: 119 LDGMFSFVLLDTRNNTYIAARD 140

>sp|P19251|ASN1_PEA Asparagine synthetase, nodule [glutamine-hydrolyzing]
           (Glutamine-dependent asparagine synthetase)
           gi|68661|pir||AJPMN1 asparagine synthase
           (glutamine-hydrolysing) (EC 6.3.5.4) [similarity] -
           garden pea gi|20650|emb|CAA36429.1| unnamed protein
           product [Pisum sativum]
          Length = 586

 Score =  206 bits (525), Expect = 1e-52
 Identities = 97/142 (68%), Positives = 118/142 (82%)
 Frame = +1

Query: 91  MCGILAVLNTTDDSQAMRSRVLALSRRQRHRGPDWSGMHQFGNNFLAHERLAIMDPASGD 270
           MCGILAVL  +DDSQA R R+L LSRR +HRGPDWSG+HQ G+N+LAH+RLAI+DPASGD
Sbjct: 1   MCGILAVLGCSDDSQAKRVRILELSRRLKHRGPDWSGLHQHGDNYLAHQRLAIVDPASGD 60

Query: 271 QPLFNEDRTIVVTVNGEIYNYKELRQQITDACPGKKFATNSDCEVISHLYELHGEKVASM 450
           QPLFNED++I+VTVNGEIYN++ELR+Q+    P  KF T  DC+VI+HLYE HGE    M
Sbjct: 61  QPLFNEDKSIIVTVNGEIYNHEELRKQL----PNHKFFTQCDCDVIAHLYEEHGENFVDM 116

Query: 451 LDGFFAFVVLDTRNNTFYAARD 516
           LDG F+FV+LDTR+N+F  ARD
Sbjct: 117 LDGIFSFVLLDTRDNSFIVARD 138

>sp|P49093|ASN2_LOTJA Asparagine synthetase [glutamine-hydrolyzing] 2
           (Glutamine-dependent asparagine synthetase 2)
           gi|2147134|pir||S69183 asparagine synthase
           (glutamine-hydrolysing) (EC 6.3.5.4) - Lotus japonicus
           gi|897773|emb|CAA61590.1| asparagine synthase
           (glutamine-hydrolysing) [Lotus corniculatus var.
           japonicus]
          Length = 586

 Score =  206 bits (525), Expect = 1e-52
 Identities = 98/142 (69%), Positives = 118/142 (83%)
 Frame = +1

Query: 91  MCGILAVLNTTDDSQAMRSRVLALSRRQRHRGPDWSGMHQFGNNFLAHERLAIMDPASGD 270
           MCGILAVL  +DDSQA R RVL LSRR +HRGPDWSG+HQ G+NFLAH+RLAI+DPASGD
Sbjct: 1   MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLHQHGDNFLAHQRLAIVDPASGD 60

Query: 271 QPLFNEDRTIVVTVNGEIYNYKELRQQITDACPGKKFATNSDCEVISHLYELHGEKVASM 450
           QPLFNED++I+VTVNGEI+N++ELR+Q+    P  KF T  DC+VI+HLYE HGE    M
Sbjct: 61  QPLFNEDQSIIVTVNGEIFNHEELRKQL----PNHKFRTGCDCDVIAHLYEEHGENFVDM 116

Query: 451 LDGFFAFVVLDTRNNTFYAARD 516
           LDG F+FV+LDTR+N+F  ARD
Sbjct: 117 LDGIFSFVLLDTRDNSFLVARD 138

>pir||JW0071 asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) - soybean
           gi|1305549|gb|AAC09952.1| asparagine synthetase [Glycine
           max]
          Length = 579

 Score =  206 bits (524), Expect = 1e-52
 Identities = 97/142 (68%), Positives = 117/142 (82%)
 Frame = +1

Query: 91  MCGILAVLNTTDDSQAMRSRVLALSRRQRHRGPDWSGMHQFGNNFLAHERLAIMDPASGD 270
           MCGILAVL  +D SQA R RVL LSRR +HRGPDWSG+HQ+G+N+LAH+RLAI+DPASGD
Sbjct: 1   MCGILAVLGCSDSSQAKRVRVLELSRRLKHRGPDWSGLHQYGDNYLAHQRLAIVDPASGD 60

Query: 271 QPLFNEDRTIVVTVNGEIYNYKELRQQITDACPGKKFATNSDCEVISHLYELHGEKVASM 450
           QPLFNED+T+VVTVNGEIYN++ELR+Q+    P   F T SDC+VI+HLYE HGE    M
Sbjct: 61  QPLFNEDKTVVVTVNGEIYNHEELRKQL----PNHTFRTGSDCDVIAHLYEEHGENFVDM 116

Query: 451 LDGFFAFVVLDTRNNTFYAARD 516
           LDG F+F +LDTR+N+F  ARD
Sbjct: 117 LDGIFSFALLDTRDNSFIVARD 138

>gb|AAO38524.1| asparagine synthetase [Securigera parviflora]
          Length = 586

 Score =  206 bits (524), Expect = 1e-52
 Identities = 99/142 (69%), Positives = 118/142 (82%)
 Frame = +1

Query: 91  MCGILAVLNTTDDSQAMRSRVLALSRRQRHRGPDWSGMHQFGNNFLAHERLAIMDPASGD 270
           MCGILAVL  +DDSQA R RVL LSRR +HRGPDWSG+HQ G+ FLAH+RLAI+DPASGD
Sbjct: 1   MCGILAVLGCSDDSQAKRVRVLELSRRLKHRGPDWSGLHQHGDCFLAHQRLAIVDPASGD 60

Query: 271 QPLFNEDRTIVVTVNGEIYNYKELRQQITDACPGKKFATNSDCEVISHLYELHGEKVASM 450
           QPLFNED++I+VTVNGEIYN++ELR+Q+    P  KF T SDC+VI+HLYE HGE    M
Sbjct: 61  QPLFNEDQSIIVTVNGEIYNHEELRKQM----PNHKFRTGSDCDVIAHLYEEHGENFVDM 116

Query: 451 LDGFFAFVVLDTRNNTFYAARD 516
           LDG F+FV+LDTR+N+F  ARD
Sbjct: 117 LDGIFSFVLLDTRDNSFIVARD 138



EST assemble image


clone accession position
1 MX215g01_r BP089901 1 301
2 HCL025a07_r AV640939 11 500
3 LCL050f12_r AV629032 12 474
4 MXL057b06_r BP096345 12 404
5 HCL060e05_r AV642921 43 516




Chlamydomonas reinhardtii
Kazusa DNA Research Institute