Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002373A_C01 KCC002373A_c01
(816 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC85727.1| putative carbamoyl phosphate synthase large subu... 244 1e-63
ref|NP_683122.1| carbamoyl-phosphate synthase pyrimidine-specifi... 239 5e-62
sp|Q55756|CARB_SYNY3 Carbamoyl-phosphate synthase large chain (C... 236 3e-61
ref|NP_442333.1| carbamoyl-phosphate synthase, pyrimidine-specif... 236 3e-61
ref|NP_564338.1| carbamoylphosphate synthetase -related [Arabido... 236 4e-61
>emb|CAC85727.1| putative carbamoyl phosphate synthase large subunit [Nicotiana
tabacum]
Length = 1203
Score = 244 bits (623), Expect = 1e-63
Identities = 122/207 (58%), Positives = 153/207 (72%)
Frame = +2
Query: 194 KPATSAIAKKSKQSRAQTIRVQASGNAAALPWQAAMSEIKKRRDINTIMIIGAGPIVIGQ 373
+P+ K+ + Q+ N + + + ++ KR DI I+I+GAGPIVIGQ
Sbjct: 60 RPSVLGHTHLRKRVNFSIVNEQSPSNDSVVQ-KGKQQKLGKRTDIKKILILGAGPIVIGQ 118
Query: 374 ACEFDYSGTQACKSLKKEGYRVILLNSNPATIMTDPGMADRTYVGPMTPELAEQILAKER 553
ACEFDYSGTQACK+L++EGY VIL+NSNPATIMTDP MADRTY+ PMTPEL EQ+L +ER
Sbjct: 119 ACEFDYSGTQACKALREEGYEVILINSNPATIMTDPEMADRTYIEPMTPELVEQVLERER 178
Query: 554 PDAILPTMGGQNGLNLAKTLAERGILAKYGIELIGAKLPSIDRAEDRELFKQSMTRIGLK 733
PDA+LPTMGGQ LNLA LAE G+L YG+ELIGAKL +I +AEDR+LFKQ+M IG+K
Sbjct: 179 PDALLPTMGGQTALNLAVXLAESGVLDXYGVELIGAKLGAIKKAEDRDLFKQAMKNIGIK 238
Query: 734 CAKSATDNTLEEALVIAAEIGKYPIII 814
S NTLEE + IA EIG++P+II
Sbjct: 239 TPPSGIGNTLEECIEIAGEIGEFPLII 265
Score = 102 bits (255), Expect = 6e-21
Identities = 72/217 (33%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Frame = +2
Query: 185 LGLKPATSAIAKKSKQSRAQTIRVQASGNAAALPWQAAMSEIKKRRDINTIMIIGAGPIV 364
LG+KPA + + + A T + +S + + ++A + KK ++I+G GP
Sbjct: 616 LGVKPAYKRVDTCAAEFEADTPYMYSSYD---IECESAPTGRKK------VLILGGGPNR 666
Query: 365 IGQACEFDYSGTQACKSLKKEGYRVILLNSNPATIMTDPGMADRTYVGPMTPELAEQILA 544
IGQ EFDY +L+ GY I++NSNP T+ TD +DR Y P+T E I+
Sbjct: 667 IGQGIEFDYCCCHTSFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNIID 726
Query: 545 KERPDAILPTMGGQNGLNLA----KTLAERGILAKYG---IELIGAKLPSIDRAEDRELF 703
E PD I+ GGQ L LA L ER + G + + G SID AEDRE F
Sbjct: 727 LEGPDGIIVQFGGQTPLKLALPIQNYLDERRPKTRSGAGFVRIWGTSPDSIDAAEDRERF 786
Query: 704 KQSMTRIGLKCAKSATDNTLEEALVIAAEIGKYPIII 814
+ + + K + ++A+ IA E+G YP+++
Sbjct: 787 NAILNELQIVQPKGGIAKSEKDAVAIATEVG-YPVVV 822
>ref|NP_683122.1| carbamoyl-phosphate synthase pyrimidine-specific large chain
[Thermosynechococcus elongatus BP-1]
gi|22296060|dbj|BAC09884.1| carbamoyl-phosphate synthase
pyrimidine-specific large chain [Thermosynechococcus
elongatus BP-1]
Length = 1100
Score = 239 bits (609), Expect = 5e-62
Identities = 114/167 (68%), Positives = 141/167 (84%)
Frame = +2
Query: 314 KRRDINTIMIIGAGPIVIGQACEFDYSGTQACKSLKKEGYRVILLNSNPATIMTDPGMAD 493
+R DI+ I+IIG+GPIVIGQACEFDYSGTQACK+L++EGY VIL+NSNPATIMTDP +AD
Sbjct: 3 RRTDISRILIIGSGPIVIGQACEFDYSGTQACKALREEGYEVILINSNPATIMTDPEIAD 62
Query: 494 RTYVGPMTPELAEQILAKERPDAILPTMGGQNGLNLAKTLAERGILAKYGIELIGAKLPS 673
RTY+ P+TPE+ E+++A ERPDA+LPTMGGQ LNLA LA+ G+L +YG+ELIGAKLP+
Sbjct: 63 RTYIEPLTPEMVEKVIAAERPDALLPTMGGQTALNLAVALAKSGVLDRYGVELIGAKLPA 122
Query: 674 IDRAEDRELFKQSMTRIGLKCAKSATDNTLEEALVIAAEIGKYPIII 814
I+ AEDR+LFK++M RIG+ S NTLEEA IA EIG YP+II
Sbjct: 123 IEMAEDRKLFKEAMQRIGVAVCPSGLANTLEEARAIAQEIGVYPLII 169
Score = 108 bits (271), Expect = 8e-23
Identities = 69/188 (36%), Positives = 103/188 (54%), Gaps = 4/188 (2%)
Frame = +2
Query: 263 SGNAAALPWQAAMSEIKKRRDINTIMIIGAGPIVIGQACEFDYSGTQACKSLKKEGYRVI 442
SG+ LP ++ + +K R +MI+G+GP IGQ EFDY A +L+ + Y I
Sbjct: 557 SGDVELLPPESEVLPPRKPR----VMILGSGPNRIGQGIEFDYCCCHAAYALRADDYETI 612
Query: 443 LLNSNPATIMTDPGMADRTYVGPMTPELAEQILAKERPDAILPTMGGQNGLNLA----KT 610
++NSNP T+ TD +DR Y P+T E I+ ERP I+ GGQ L LA +
Sbjct: 613 MVNSNPETVSTDYDTSDRLYFEPLTKEDVLNIIEVERPVGIIIQFGGQTPLKLALPLQRY 672
Query: 611 LAERGILAKYGIELIGAKLPSIDRAEDRELFKQSMTRIGLKCAKSATDNTLEEALVIAAE 790
L ++G + G ++ G SID AEDRE F++ + + + + T + EAL IA
Sbjct: 673 LQQQG--DRLGTQIWGTSPDSIDIAEDRERFEKILRELNIPQPPNGTARSYAEALSIAER 730
Query: 791 IGKYPIII 814
IG YP+++
Sbjct: 731 IG-YPVVV 737
>sp|Q55756|CARB_SYNY3 Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
synthetase ammonia chain)
Length = 1081
Score = 236 bits (602), Expect = 3e-61
Identities = 110/167 (65%), Positives = 140/167 (82%)
Frame = +2
Query: 314 KRRDINTIMIIGAGPIVIGQACEFDYSGTQACKSLKKEGYRVILLNSNPATIMTDPGMAD 493
+R D+N IMI+GAGPIVIGQACEFDYSGTQACK+LK+EGY V+L+NSNPA+IMTDP +AD
Sbjct: 3 RRNDLNKIMILGAGPIVIGQACEFDYSGTQACKALKEEGYEVVLVNSNPASIMTDPELAD 62
Query: 494 RTYVGPMTPELAEQILAKERPDAILPTMGGQNGLNLAKTLAERGILAKYGIELIGAKLPS 673
RTY+ P+ PE+ E+I+ KERPDA+LPTMGGQ LNLA +L++ G+L KYG+ELIGAKLP+
Sbjct: 63 RTYIEPLIPEIVEKIIEKERPDAVLPTMGGQTALNLAVSLSKSGVLEKYGVELIGAKLPA 122
Query: 674 IDRAEDRELFKQSMTRIGLKCAKSATDNTLEEALVIAAEIGKYPIII 814
I+ EDRELFK++M RIG+ S +++EEA +A EIG YP+II
Sbjct: 123 IEMGEDRELFKEAMARIGVPVCPSGIASSIEEARQVAHEIGSYPLII 169
Score = 95.5 bits (236), Expect = 9e-19
Identities = 59/162 (36%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Frame = +2
Query: 335 IMIIGAGPIVIGQACEFDYSGTQACKSLKKEGYRVILLNSNPATIMTDPGMADRTYVGPM 514
+MI+G GP IGQ EFDY A SL GY I++NSNP T+ TD +DR Y P+
Sbjct: 561 VMILGGGPNRIGQGIEFDYCCCHAAFSLSDAGYETIMVNSNPETVSTDYDTSDRLYFEPL 620
Query: 515 TPELAEQILAKERPDAILPTMGGQNGLNLAKTLAE--RGILAKYGIELIGAKLPSIDRAE 688
T E I+ E P I+ GGQ L LA L + ++ G SID AE
Sbjct: 621 TKEDVLNIIEAENPVGIIIQFGGQTPLKLAVPLQKYLNSPDCPVQTKIWGTSPDSIDTAE 680
Query: 689 DRELFKQSMTRIGLKCAKSATDNTLEEALVIAAEIGKYPIII 814
DRE F++ + + + + EE+ V+A I YP+++
Sbjct: 681 DRERFEKILHELEISQPPNGIARDYEESRVVANRI-SYPVVV 721
>ref|NP_442333.1| carbamoyl-phosphate synthase, pyrimidine-specific, large chain
[Synechocystis sp. PCC 6803] gi|7438086|pir||S76557
carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC
6.3.5.5) large chain [similarity] - Synechocystis sp.
(strain PCC 6803) gi|1001668|dbj|BAA10403.1|
carbamoyl-phosphate synthase, pyrimidine-specific, large
chain [Synechocystis sp. PCC 6803]
Length = 1105
Score = 236 bits (602), Expect = 3e-61
Identities = 110/167 (65%), Positives = 140/167 (82%)
Frame = +2
Query: 314 KRRDINTIMIIGAGPIVIGQACEFDYSGTQACKSLKKEGYRVILLNSNPATIMTDPGMAD 493
+R D+N IMI+GAGPIVIGQACEFDYSGTQACK+LK+EGY V+L+NSNPA+IMTDP +AD
Sbjct: 27 RRNDLNKIMILGAGPIVIGQACEFDYSGTQACKALKEEGYEVVLVNSNPASIMTDPELAD 86
Query: 494 RTYVGPMTPELAEQILAKERPDAILPTMGGQNGLNLAKTLAERGILAKYGIELIGAKLPS 673
RTY+ P+ PE+ E+I+ KERPDA+LPTMGGQ LNLA +L++ G+L KYG+ELIGAKLP+
Sbjct: 87 RTYIEPLIPEIVEKIIEKERPDAVLPTMGGQTALNLAVSLSKSGVLEKYGVELIGAKLPA 146
Query: 674 IDRAEDRELFKQSMTRIGLKCAKSATDNTLEEALVIAAEIGKYPIII 814
I+ EDRELFK++M RIG+ S +++EEA +A EIG YP+II
Sbjct: 147 IEMGEDRELFKEAMARIGVPVCPSGIASSIEEARQVAHEIGSYPLII 193
Score = 95.5 bits (236), Expect = 9e-19
Identities = 59/162 (36%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Frame = +2
Query: 335 IMIIGAGPIVIGQACEFDYSGTQACKSLKKEGYRVILLNSNPATIMTDPGMADRTYVGPM 514
+MI+G GP IGQ EFDY A SL GY I++NSNP T+ TD +DR Y P+
Sbjct: 585 VMILGGGPNRIGQGIEFDYCCCHAAFSLSDAGYETIMVNSNPETVSTDYDTSDRLYFEPL 644
Query: 515 TPELAEQILAKERPDAILPTMGGQNGLNLAKTLAE--RGILAKYGIELIGAKLPSIDRAE 688
T E I+ E P I+ GGQ L LA L + ++ G SID AE
Sbjct: 645 TKEDVLNIIEAENPVGIIIQFGGQTPLKLAVPLQKYLNSPDCPVQTKIWGTSPDSIDTAE 704
Query: 689 DRELFKQSMTRIGLKCAKSATDNTLEEALVIAAEIGKYPIII 814
DRE F++ + + + + EE+ V+A I YP+++
Sbjct: 705 DRERFEKILHELEISQPPNGIARDYEESRVVANRI-SYPVVV 745
>ref|NP_564338.1| carbamoylphosphate synthetase -related [Arabidopsis thaliana]
gi|25293882|pir||F86422 carbamoyl-phosphate synthase
(ammonia) (EC 6.3.4.16) - Arabidopsis thaliana
gi|1477480|gb|AAB67843.1| carbamoyl phosphate synthetase
large chain [Arabidopsis thaliana]
gi|9972356|gb|AAG10606.1|AC008030_6 carbamoyl phosphate
synthetase large chain (carB) [Arabidopsis thaliana]
gi|14194125|gb|AAK56257.1|AF367268_1 At1g29900/F1N18_6
[Arabidopsis thaliana] gi|22137066|gb|AAM91378.1|
At1g29900/F1N18_6 [Arabidopsis thaliana]
Length = 1187
Score = 236 bits (601), Expect = 4e-61
Identities = 115/169 (68%), Positives = 136/169 (80%)
Frame = +2
Query: 308 IKKRRDINTIMIIGAGPIVIGQACEFDYSGTQACKSLKKEGYRVILLNSNPATIMTDPGM 487
+ KR D+ IMI+GAGPIVIGQACEFDYSGTQACK+L++EGY VIL+NSNPATIMTDP
Sbjct: 92 VGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALREEGYEVILINSNPATIMTDPET 151
Query: 488 ADRTYVGPMTPELAEQILAKERPDAILPTMGGQNGLNLAKTLAERGILAKYGIELIGAKL 667
A+RTY+ PMTPEL EQ++ KERPDA+LPTMGGQ LNLA LAE G L KYG+ELIGAKL
Sbjct: 152 ANRTYIAPMTPELVEQVIEKERPDALLPTMGGQTALNLAVALAESGALEKYGVELIGAKL 211
Query: 668 PSIDRAEDRELFKQSMTRIGLKCAKSATDNTLEEALVIAAEIGKYPIII 814
+I +AEDRELFK +M IGLK S TL+E IA +IG++P+II
Sbjct: 212 GAIKKAEDRELFKDAMKNIGLKTPPSGIGTTLDECFDIAEKIGEFPLII 260
Score = 99.8 bits (247), Expect = 5e-20
Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
Frame = +2
Query: 335 IMIIGAGPIVIGQACEFDYSGTQACKSLKKEGYRVILLNSNPATIMTDPGMADRTYVGPM 514
++I+G GP IGQ EFDY +L+ GY I+LNSNP T+ TD +DR Y P+
Sbjct: 652 VLILGGGPNRIGQGIEFDYCCCHTSFALQDAGYETIMLNSNPETVSTDYDTSDRLYFEPL 711
Query: 515 TPELAEQILAKERPDAILPTMGGQNGLNLAKTLAE-------RGILAKYGIELIGAKLPS 673
T E ++ E+PD I+ GGQ L LA + + + + G S
Sbjct: 712 TIEDVLNVIDLEKPDGIIVQFGGQTPLKLALPIKHYLDKHMPMSLSGAGPVRIWGTSPDS 771
Query: 674 IDRAEDRELFKQSMTRIGLKCAKSATDNTLEEALVIAAEIGKYPIII 814
ID AEDRE F + + ++ K + +AL IA E+G YP+++
Sbjct: 772 IDAAEDRERFNAILDELKIEQPKGGIAKSEADALAIAKEVG-YPVVV 817