Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002370A_C01 KCC002370A_c01
(535 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_295384.1| stage V sporulation protein S-related protein [... 44 0.001
ref|NP_656011.1| hypothetical protein predicted by GeneMark [Bac... 44 0.002
ref|NP_831908.1| Stage V sporulation protein S [Bacillus cereus ... 42 0.005
ref|NP_622288.1| conserved hypothetical protein [Thermoanaerobac... 42 0.007
ref|NP_228865.1| spoVS-related protein [Thermotoga maritima] gi|... 42 0.007
>ref|NP_295384.1| stage V sporulation protein S-related protein [Deinococcus
radiodurans] gi|7473931|pir||H75370 stage V sporulation
protein S-related protein - Deinococcus radiodurans
(strain R1) gi|6459423|gb|AAF11214.1|AE002008_9 stage V
sporulation protein S-related protein [Deinococcus
radiodurans]
Length = 101
Score = 43.9 bits (102), Expect = 0.001
Identities = 29/81 (35%), Positives = 39/81 (47%), Gaps = 5/81 (6%)
Frame = +2
Query: 248 IKVSAKGNVKAVAGKIVHSAREGEVPAGLCIGPECVNVGIKGIGIARTYLQQDTIDLSFQ 427
+KVSA +VAG I R IGP VN +K + IAR YL +D +DLS Q
Sbjct: 13 LKVSADSRPHSVAGAIAALLRSQGRVEVQAIGPAAVNQAVKALAIARGYLTEDGLDLSTQ 72
Query: 428 TDF-----READRSKKSLALY 475
F + +R+ L +Y
Sbjct: 73 PAFVKLEVEQEERTAIKLGVY 93
>ref|NP_656011.1| hypothetical protein predicted by GeneMark [Bacillus anthracis
A2012] gi|30262175|ref|NP_844552.1| stage V sporulation
protein S [Bacillus anthracis str. Ames]
gi|30256801|gb|AAP26038.1| stage V sporulation protein S
[Bacillus anthracis str. Ames]
Length = 91
Score = 43.5 bits (101), Expect = 0.002
Identities = 30/89 (33%), Positives = 44/89 (48%), Gaps = 3/89 (3%)
Frame = +2
Query: 242 NFIKVSAKGNVKAVAGKIVHSAREGEVPAGLCIGPECVNVGIKGIGIARTYLQQDTIDLS 421
N +KVS+K + +VAG I R IG +N IK I IAR ++ IDL+
Sbjct: 3 NILKVSSKSSPNSVAGAIAGVLRTSGNVEIQAIGAGSLNQAIKAIAIARGFVAPGGIDLA 62
Query: 422 FQTDFREA---DRSKKSLALYIAKGKARA 499
F F+E D+ + ++ L I K R+
Sbjct: 63 FVPAFQEVTINDQERTAIKLIIGPRKKRS 91
>ref|NP_831908.1| Stage V sporulation protein S [Bacillus cereus ATCC 14579]
gi|29895827|gb|AAP09109.1| Stage V sporulation protein S
[Bacillus cereus ATCC 14579]
Length = 91
Score = 42.0 bits (97), Expect = 0.005
Identities = 28/89 (31%), Positives = 43/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 242 NFIKVSAKGNVKAVAGKIVHSAREGEVPAGLCIGPECVNVGIKGIGIARTYLQQDTIDLS 421
N +KVS+K + +VAG I R IG +N IK I IAR ++ IDL+
Sbjct: 3 NILKVSSKSSPNSVAGAIAGVLRTSGNVEIQAIGAGAINQAIKAIAIARGFVAPSGIDLA 62
Query: 422 FQTDFREA---DRSKKSLALYIAKGKARA 499
F F+E + + ++ L + K R+
Sbjct: 63 FVPAFQEISINNEDRTAIKLIVGPRKKRS 91
>ref|NP_622288.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis]
gi|20515611|gb|AAM23892.1| conserved hypothetical
protein [Thermoanaerobacter tengcongensis]
Length = 87
Score = 41.6 bits (96), Expect = 0.007
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 248 IKVSAKGNVKAVAGKIVHSAREGEVPAGLCIGPECVNVGIKGIGIARTYLQQDTIDLSFQ 427
++VS N K+VAG + RE IG VN +K I IAR ++ + IDL
Sbjct: 5 LRVSTNSNPKSVAGALAAIVREKSAAEIQAIGAGAVNQAVKAIAIARGFVAPNGIDLVMV 64
Query: 428 TDFREA--DRSKKSLALYIAKGK 490
F E D K++ +I K +
Sbjct: 65 PAFVEVEIDGEKRTAMKFIVKAR 87
>ref|NP_228865.1| spoVS-related protein [Thermotoga maritima] gi|7462952|pir||F72299
spoVS-related protein - Thermotoga maritima (strain
MSB8) gi|4981602|gb|AAD36136.1|AE001766_2 spoVS-related
protein [Thermotoga maritima]
Length = 87
Score = 41.6 bits (96), Expect = 0.007
Identities = 30/84 (35%), Positives = 39/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 248 IKVSAKGNVKAVAGKIVHSAREGEVPAGLCIGPECVNVGIKGIGIARTYLQQDTIDLSFQ 427
+KVS+K + VAG I RE IG VN +K I IAR YL IDL F
Sbjct: 4 LKVSSKSDPNKVAGAIAGVVREHGKAEIQAIGAGAVNQAVKAIAIARGYLAPSGIDLVFV 63
Query: 428 TDFR--EADRSKKSLALYIAKGKA 493
F E + K++ +I K+
Sbjct: 64 PAFTDVEIENEKRTAIKFIVFPKS 87
