KCC002368A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002368A_C01 KCC002368A_c01
caataacctgtatgttttgtttCTACAAAAGCAACCTCTGCTCTGACCTCTGACCAATAG
CCTTGTGTCCTTCCGCCGCCGCGAACGGGGCTATGGGCAATACTAAAACATTCATTGATA
ATGAAGCTCTAGAGCAGCCGAAGTTGCCAAGGCGCCAGGGGTGCGAAATACCATGGACAA
TTTGTCCCTCCAAGTCGTGGACCCGCTGCTGGGCAACGCCCAATACTGCAAGGTTAAGGA
CCTTGGAATTGGGAGCTTCGGCAGCGTCGCCCTCTACACCCGGAACGAAGGCCGTGGGGA
ACCATCGCTATGTGCGGTGAAGTTCATGAACCGGAGCGGACCGGGGGTGGACATCAACCT
TATTCAGCGCGAAATTCAGTCCCATCGCGTACTGCGCCACCCCCACGTCATCCGCTTCAA
GCAGCTGGGGCTCACGCCCACGCACATCTTCATGTGCATGGAGTTCGCTGACCAGGGCGA
CCTCCTCGGCTTCCTGCGGCGCAAGGGGCCGCTGCCGGAGGCCGACTCGCGCTGGCTCTT
CCAGCAGATCATCTTCGGCCTGGATTACTGCCATCTCAAAGGAGTGGTCAACCGCGACCT
CAAGCCCGAGAACCTGGTGCTCAAGCTGACGCCGGAGGCCAGCATAAGGCACAGGAA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002368A_C01 KCC002368A_c01
         (657 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAC98509.1| sulfur stress regulator [Chlamydomonas reinhardtii]    133  3e-30
ref|NP_201170.1| serine/threonine protein kinase, putative [Arab...   112  6e-24
gb|AAM65503.1| serine/threonine-protein kinase [Arabidopsis thal...   112  6e-24
pir||S56719 serine/threonine-specific protein kinase SPK-1 (EC 2...   110  2e-23
gb|AAA34017.1| protein kinase 2                                       110  2e-23

>gb|AAC98509.1| sulfur stress regulator [Chlamydomonas reinhardtii]
          Length = 357

 Score =  133 bits (334), Expect = 3e-30
 Identities = 69/150 (46%), Positives = 100/150 (66%)
 Frame = +2

Query: 200 DPLLGNAQYCKVKDLGIGSFGSVALYTRNEGRGEPSLCAVKFMNRSGPGVDINLIQREIQ 379
           +PL+G+ +Y K+KDL  G+FG V L  R++  GE    AVKF+ R         ++REI 
Sbjct: 15  EPLIGHPRYEKIKDLNSGTFGFVQL-ARDKLTGET--WAVKFIERGDKIT--KYVEREII 69

Query: 380 SHRVLRHPHVIRFKQLGLTPTHIFMCMEFADQGDLLGFLRRKGPLPEADSRWLFQQIIFG 559
           +HR L HPH+++F+++ LTPTH+ + MEFA  GD+  ++ RK  L E ++RW FQQ+I G
Sbjct: 70  NHRCLVHPHIVQFREVFLTPTHLCIVMEFAPGGDMFEYVVRKNGLREDEARWFFQQLIVG 129

Query: 560 LDYCHLKGVVNRDLKPENLVLKLTPEASIR 649
           LDYCH  GVVNRD+K EN +L  +P   ++
Sbjct: 130 LDYCHRMGVVNRDIKLENTLLDSSPRPLVK 159

>ref|NP_201170.1| serine/threonine protein kinase, putative [Arabidopsis thaliana]
           gi|10177046|dbj|BAB10458.1| serine/threonine-protein
           kinase [Arabidopsis thaliana]
          Length = 360

 Score =  112 bits (279), Expect = 6e-24
 Identities = 62/138 (44%), Positives = 89/138 (63%)
 Frame = +2

Query: 221 QYCKVKDLGIGSFGSVALYTRNEGRGEPSLCAVKFMNRSGPGVDINLIQREIQSHRVLRH 400
           +Y  VKDLG G+FG   L    E +    L A+K++ R G  +D N + REI +HR LRH
Sbjct: 3   KYEVVKDLGAGNFGVARLLRHKETK---ELVAMKYIER-GRKIDEN-VAREIINHRSLRH 57

Query: 401 PHVIRFKQLGLTPTHIFMCMEFADQGDLLGFLRRKGPLPEADSRWLFQQIIFGLDYCHLK 580
           P++IRFK++ LTPTH+ + ME+A  G+L   +   G   EA++R+ FQQ+I G+DYCH  
Sbjct: 58  PNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSL 117

Query: 581 GVVNRDLKPENLVLKLTP 634
            + +RDLK EN +L  +P
Sbjct: 118 QICHRDLKLENTLLDGSP 135

>gb|AAM65503.1| serine/threonine-protein kinase [Arabidopsis thaliana]
          Length = 358

 Score =  112 bits (279), Expect = 6e-24
 Identities = 62/138 (44%), Positives = 89/138 (63%)
 Frame = +2

Query: 221 QYCKVKDLGIGSFGSVALYTRNEGRGEPSLCAVKFMNRSGPGVDINLIQREIQSHRVLRH 400
           +Y  VKDLG G+FG   L    E +    L A+K++ R G  +D N + REI +HR LRH
Sbjct: 3   KYEVVKDLGAGNFGVARLLRHKETK---ELVAMKYIER-GRKIDEN-VAREIINHRSLRH 57

Query: 401 PHVIRFKQLGLTPTHIFMCMEFADQGDLLGFLRRKGPLPEADSRWLFQQIIFGLDYCHLK 580
           P++IRFK++ LTPTH+ + ME+A  G+L   +   G   EA++R+ FQQ+I G+DYCH  
Sbjct: 58  PNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSL 117

Query: 581 GVVNRDLKPENLVLKLTP 634
            + +RDLK EN +L  +P
Sbjct: 118 QICHRDLKLENTLLDGSP 135

>pir||S56719 serine/threonine-specific protein kinase SPK-1 (EC 2.7.1.-) -
           soybean gi|169991|gb|AAA33979.1| protein kinase
          Length = 339

 Score =  110 bits (274), Expect = 2e-23
 Identities = 61/143 (42%), Positives = 94/143 (65%)
 Frame = +2

Query: 221 QYCKVKDLGIGSFGSVALYTRNEGRGEPSLCAVKFMNRSGPGVDINLIQREIQSHRVLRH 400
           +Y  +K+LG G+FG VA   +++  GE  L A+K++ R G  +D N +QREI +HR LRH
Sbjct: 4   RYETLKELGSGNFG-VARLAKDKETGE--LVAIKYIER-GKKIDAN-VQREIVNHRSLRH 58

Query: 401 PHVIRFKQLGLTPTHIFMCMEFADQGDLLGFLRRKGPLPEADSRWLFQQIIFGLDYCHLK 580
           P++IRFK++ LTPTH+ + +E+A  G+L   +   G L E ++R+ FQQ+I G+ YCH  
Sbjct: 59  PNIIRFKEVFLTPTHLAIVLEYAAGGELFERICNAGRLSEDEARFFFQQLISGVSYCHSM 118

Query: 581 GVVNRDLKPENLVLKLTPEASIR 649
            + +RDLK EN +L   P   ++
Sbjct: 119 QICHRDLKLENTLLDGNPAPRLK 141

>gb|AAA34017.1| protein kinase 2
          Length = 339

 Score =  110 bits (274), Expect = 2e-23
 Identities = 61/143 (42%), Positives = 94/143 (65%)
 Frame = +2

Query: 221 QYCKVKDLGIGSFGSVALYTRNEGRGEPSLCAVKFMNRSGPGVDINLIQREIQSHRVLRH 400
           +Y  +K+LG G+FG VA   +++  GE  L A+K++ R G  +D N +QREI +HR LRH
Sbjct: 4   RYETLKELGSGNFG-VARLAKDKETGE--LVAIKYIER-GKKIDAN-VQREIVNHRSLRH 58

Query: 401 PHVIRFKQLGLTPTHIFMCMEFADQGDLLGFLRRKGPLPEADSRWLFQQIIFGLDYCHLK 580
           P++IRFK++ LTPTH+ + +E+A  G+L   +   G L E ++R+ FQQ+I G+ YCH  
Sbjct: 59  PNIIRFKEVFLTPTHLAIVLEYAAGGELFERICNAGRLSEDEARFFFQQLISGVSYCHSM 118

Query: 581 GVVNRDLKPENLVLKLTPEASIR 649
            + +RDLK EN +L   P   ++
Sbjct: 119 QICHRDLKLENTLLDGNPAPRLK 141



EST assemble image


clone accession position
1 MXL096g03_r BP098637 1 395
2 HCL068h04_r AV643393 23 466
3 HCL023d08_r AV640848 199 657




Chlamydomonas reinhardtii
Kazusa DNA Research Institute