Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002365A_C01 KCC002365A_c01
(797 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565879.1| vacuolar protein -related sorting-associated pr... 60 2e-14
pir||A84800 hypothetical protein At2g38020 [imported] - Arabidop... 60 2e-14
ref|XP_326123.1| hypothetical protein [Neurospora crassa] gi|289... 63 8e-12
dbj|BAB90498.1| putative vacuolar protein sorting protein [Oryza... 61 7e-10
ref|NP_593444.1| vacuolar protein sorting-associated protein [Sc... 60 5e-08
>ref|NP_565879.1| vacuolar protein -related sorting-associated protein [Arabidopsis
thaliana] gi|13877133|gb|AAK43713.1|AF359240_1 VCL1
[Arabidopsis thaliana] gi|15081711|gb|AAK82510.1|
At2g38020/T8P21.7 [Arabidopsis thaliana]
gi|22655028|gb|AAM98105.1| At2g38020/T8P21.7
[Arabidopsis thaliana]
Length = 858
Score = 59.7 bits (143), Expect(2) = 2e-14
Identities = 30/85 (35%), Positives = 48/85 (56%)
Frame = +1
Query: 541 GGADHISVSPDGAFVAMYTQDHRLVVLASDLTKQLTEFEMRGAECAPQALHWVGADAVLL 720
G + VSP+G F+ ++T D R+VV+ + TKQ+ + PQ + W G D+VLL
Sbjct: 241 GVVQKMIVSPNGKFLTLFTHDGRIVVVDME-TKQIAIDYSCESALPPQQMAWCGMDSVLL 299
Query: 721 VWPETAVLVGPYGDSVQWSMSDDVL 795
W E ++VGP GD V + + ++
Sbjct: 300 YWDEDLMMVGPVGDPVHYFYDEPII 324
Score = 41.6 bits (96), Expect(2) = 2e-14
Identities = 36/158 (22%), Positives = 61/158 (37%), Gaps = 1/158 (0%)
Frame = +3
Query: 3 LVDWGWTDEQQLAAVEANGKVTVYSPYAEKVR-EFRFGAAVERDTVAAAIVYGTGVLVVT 179
L+ W+D+Q L + +G + Y+ +AE + G V + +G GV+ +T
Sbjct: 90 LIGMSWSDDQTLICIVQDGTIYRYNIHAELIEPNMSMGQECFEQNVVECVFWGNGVVCLT 149
Query: 180 EAQLQPAPPGSSTPTATVSEPGSIWLVEDLREPRPTRLTSPPLTAFTPTATEDNRGDLGG 359
E G + + D + +P++L P A ED+
Sbjct: 150 EG-------------------GQLICIFDFKTMKPSKLPDVPGLA------EDD------ 178
Query: 360 SGLLSLGGLGRLGLPSCVAVLDPRHTLSTRVEVLAVVG 473
L P C+ V +P++T+S EVL VG
Sbjct: 179 -----------LLQPICLTVREPKYTMSGIAEVLVAVG 205
>pir||A84800 hypothetical protein At2g38020 [imported] - Arabidopsis thaliana
gi|4895182|gb|AAD32769.1|AC007661_6 putative vacuolar
protein sorting-associated protein (VPS16) [Arabidopsis
thaliana]
Length = 746
Score = 59.7 bits (143), Expect(2) = 2e-14
Identities = 30/85 (35%), Positives = 48/85 (56%)
Frame = +1
Query: 541 GGADHISVSPDGAFVAMYTQDHRLVVLASDLTKQLTEFEMRGAECAPQALHWVGADAVLL 720
G + VSP+G F+ ++T D R+VV+ + TKQ+ + PQ + W G D+VLL
Sbjct: 241 GVVQKMIVSPNGKFLTLFTHDGRIVVVDME-TKQIAIDYSCESALPPQQMAWCGMDSVLL 299
Query: 721 VWPETAVLVGPYGDSVQWSMSDDVL 795
W E ++VGP GD V + + ++
Sbjct: 300 YWDEDLMMVGPVGDPVHYFYDEPII 324
Score = 41.6 bits (96), Expect(2) = 2e-14
Identities = 36/158 (22%), Positives = 61/158 (37%), Gaps = 1/158 (0%)
Frame = +3
Query: 3 LVDWGWTDEQQLAAVEANGKVTVYSPYAEKVR-EFRFGAAVERDTVAAAIVYGTGVLVVT 179
L+ W+D+Q L + +G + Y+ +AE + G V + +G GV+ +T
Sbjct: 90 LIGMSWSDDQTLICIVQDGTIYRYNIHAELIEPNMSMGQECFEQNVVECVFWGNGVVCLT 149
Query: 180 EAQLQPAPPGSSTPTATVSEPGSIWLVEDLREPRPTRLTSPPLTAFTPTATEDNRGDLGG 359
E G + + D + +P++L P A ED+
Sbjct: 150 EG-------------------GQLICIFDFKTMKPSKLPDVPGLA------EDD------ 178
Query: 360 SGLLSLGGLGRLGLPSCVAVLDPRHTLSTRVEVLAVVG 473
L P C+ V +P++T+S EVL VG
Sbjct: 179 -----------LLQPICLTVREPKYTMSGIAEVLVAVG 205
>ref|XP_326123.1| hypothetical protein [Neurospora crassa] gi|28924513|gb|EAA33636.1|
hypothetical protein [Neurospora crassa]
Length = 870
Score = 62.8 bits (151), Expect(2) = 8e-12
Identities = 30/73 (41%), Positives = 46/73 (62%)
Frame = +1
Query: 541 GGADHISVSPDGAFVAMYTQDHRLVVLASDLTKQLTEFEMRGAECAPQALHWVGADAVLL 720
G HIS+SP+G FVA+YT+ + V++SD +L+E+ + ++ PQ W G DAV++
Sbjct: 223 GPFSHISISPNGKFVALYTKTGKAHVISSDFQTRLSEYVSK-SKIPPQYFEWCGNDAVVI 281
Query: 721 VWPETAVLVGPYG 759
W + LVGP G
Sbjct: 282 AWEDEVRLVGPGG 294
Score = 29.6 bits (65), Expect(2) = 8e-12
Identities = 32/153 (20%), Positives = 50/153 (31%)
Frame = +3
Query: 15 GWTDEQQLAAVEANGKVTVYSPYAEKVREFRFGAAVERDTVAAAIVYGTGVLVVTEAQLQ 194
GW+++++L V +G V Y +F G + V + YG G++ +
Sbjct: 100 GWSEDEKLLVVTGDGTVRCYYDLQGDFTQFSLGHDADEIGVRSCKFYGHGLVALLNNN-- 157
Query: 195 PAPPGSSTPTATVSEPGSIWLVEDLREPRPTRLTSPPLTAFTPTATEDNRGDLGGSGLLS 374
S+ V EPRP L PP
Sbjct: 158 -----------------SLVSVSAYDEPRPKLLAQPPE---------------------- 178
Query: 375 LGGLGRLGLPSCVAVLDPRHTLSTRVEVLAVVG 473
G +++ P +TLS VEVL +G
Sbjct: 179 -------GPVHSWSLVPPAYTLSRSVEVLLSIG 204
>dbj|BAB90498.1| putative vacuolar protein sorting protein [Oryza sativa (japonica
cultivar-group)]
Length = 892
Score = 60.8 bits (146), Expect(2) = 7e-10
Identities = 29/84 (34%), Positives = 48/84 (56%)
Frame = +1
Query: 541 GGADHISVSPDGAFVAMYTQDHRLVVLASDLTKQLTEFEMRGAECAPQALHWVGADAVLL 720
G ++VSP+G +A + D RL+V+ +D +K + E+E A P + W G D+VLL
Sbjct: 304 GPVQKMAVSPNGKLLAAFAHDGRLLVIPTDFSKIIFEYECDSA-LPPDQIAWCGLDSVLL 362
Query: 721 VWPETAVLVGPYGDSVQWSMSDDV 792
W ++VGP GD V ++ + +
Sbjct: 363 YWSAALLMVGPNGDPVLYNYDEPI 386
Score = 25.0 bits (53), Expect(2) = 7e-10
Identities = 11/27 (40%), Positives = 18/27 (65%)
Frame = +3
Query: 408 CVAVLDPRHTLSTRVEVLAVVGGVLVA 488
C+AV++P+ +S EVL VG ++A
Sbjct: 262 CMAVVEPQFVMSGSPEVLLAVGDRVLA 288
>ref|NP_593444.1| vacuolar protein sorting-associated protein [Schizosaccharomyces
pombe] gi|34098757|sp|Q9UT38|VP16_SCHPO Probable
vacuolar protein sorting 16 gi|7493604|pir||T39106
vacuolar protein sorting-associated protein - fission
yeast (Schizosaccharomyces pombe)
gi|6013102|emb|CAB57335.1| SPAC824.05
[Schizosaccharomyces pombe]
Length = 835
Score = 59.7 bits (143), Expect = 5e-08
Identities = 33/101 (32%), Positives = 59/101 (57%), Gaps = 2/101 (1%)
Frame = +1
Query: 478 YLWQLDEVSATDHHPAALRSAGGADHISVSPDGAFVAMYTQDHRLVVLASDLTKQLTEFE 657
++ Q+DE + H ++L+ HIS+SP+ ++A+Y ++ V++SD +K+L +
Sbjct: 206 HILQIDEQDSQLHSISSLQHVS---HISISPNARYLALYESVGKVRVISSDFSKELLDLR 262
Query: 658 MRG--AECAPQALHWVGADAVLLVWPETAVLVGPYGDSVQW 774
+ AE + + + W G DAV+LV LVGP+G SV +
Sbjct: 263 LPETVAEASLKQMAWCGNDAVVLVHENLLTLVGPFGGSVPY 303
