KCC002364A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002364A_C01 KCC002364A_c01
catgaattattctcactaggcagaccagaaaGGCGAAATTACGCTTTCAGTCTAGGAGGA
AGACCCTCGCGCCCAGCTTTTCTACTCACATGTCGGCCAAAGCAGACAGCATATGGCAAC
GTTGAGGCTCGATGTCAGCGGGCGACTCGACGAGGAGGCGCCCTCTCGTGAACACAAGCA
CCATAACCGGAATGTGGACGAGGCAGAGCGCGAGTGTGTGTTCACGCTTGAGCCGGAGCC
CTCGAGCTCGCCGGGCCACATCTACACGGACTTGAGCTGCTTTCGGGACCTCACAACACT
ACACCAGGGCAGGCACTCGACTGTATGGTCGGCTGTCTGCAAGCGCACCGGGCGCACCTG
CGTGATAAAGGGATACAACCGCGACTCGCTCAAGCCGCGGCAGCTTAACAATGTTCGGAG
GGAAATTGGACTGCTCAGATTCTTCCGCGACACAGGGACTAAGGGCGTTGTGGCCCTGCT
GGCGGCTTTCGAGGACAAAACCATGATATACCTGGTGTTTGAGGCGTGCATGCGCGGAGA
CCTCTACCAGCTGCTGATGCGCAACCGCGGGACCCTGCACGAGGAGTTTGTGGTCACCAA
GATTGTGTTCCCGCTGCTGTGCGTGCTACAGCAACTGCACAAGCTGCACATCGTGCACCG
GGACATAAAACCCGAAAACATCTTCATCACA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002364A_C01 KCC002364A_c01
         (691 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF97501.1|AF199021_1 CALK protein [Chlamydomonas reinhardtii]      88  1e-16
emb|CAD88263.1| ark1 [Schizosaccharomyces pombe] gi|29786364|emb...    77  3e-13
ref|NP_587716.1| protein kinase. [Schizosaccharomyces pombe] gi|...    77  3e-13
gb|EAA21610.1| myosin light chain kinase [Plasmodium yoelii yoelii]    71  1e-11
gb|AAF21062.1| calcium-dependent protein kinase [Dunaliella tert...    70  2e-11

>gb|AAF97501.1|AF199021_1 CALK protein [Chlamydomonas reinhardtii]
          Length = 769

 Score = 87.8 bits (216), Expect = 1e-16
 Identities = 51/137 (37%), Positives = 70/137 (50%)
 Frame = +2

Query: 281 FRDLTTLHQGRHSTVWSAVCKRTGRTCVIKGYNRDSLKPRQLNNVRREIGLLRFFRDTGT 460
           F  L  +  G  STV+   C+ +G    +K Y++  L       V REI +         
Sbjct: 37  FHLLRKVGSGYASTVYLGTCRTSGNQVAVKLYHKQKLSELNHFQVAREITI---HSSLDH 93

Query: 461 KGVVALLAAFEDKTMIYLVFEACMRGDLYQLLMRNRGTLHEEFVVTKIVFPLLCVLQQLH 640
           K ++ L AAFED+  IYLVFE   +GD++  + R  G L E   V  +V+P L  L  LH
Sbjct: 94  KNIIQLWAAFEDQYGIYLVFEYASKGDVFTEVERRGGQLDEAETVRAVVYPFLSALDYLH 153

Query: 641 KLHIVHRDIKPENIFIT 691
              I+HRDIKPEN+  T
Sbjct: 154 SRCIIHRDIKPENLLFT 170

>emb|CAD88263.1| ark1 [Schizosaccharomyces pombe] gi|29786364|emb|CAD88264.1| ark1
           [Schizosaccharomyces pombe]
          Length = 355

 Score = 76.6 bits (187), Expect = 3e-13
 Identities = 60/196 (30%), Positives = 89/196 (44%), Gaps = 7/196 (3%)
 Frame = +2

Query: 122 LRLDVSGRLDEEAPSREHKHHNRNVDEAERECVFTLEPEP------SSSPGHIYTDLSCF 283
           LRL VS +      S  +   N+    ++         EP      S+ P      +  F
Sbjct: 30  LRLAVSNQRQVNNVSLANGKENKRTSNSKFNSSLRKIEEPIAGVPSSAGPQWREFHIGMF 89

Query: 284 RDLTTLHQGRHSTVWSAVCKRTGRTCVIKGYNRDSLKPRQLNN-VRREIGLLRFFRDTGT 460
                L +G+   V+ A  K+TG    +K  ++  L   ++   VRREI +    R    
Sbjct: 90  EIGKPLGKGKFGRVYLAKEKKTGFIVALKTLHKSELVQSKIEKQVRREIEIQSNLRH--- 146

Query: 461 KGVVALLAAFEDKTMIYLVFEACMRGDLYQLLMRNRGTLHEEFVVTKIVFPLLCVLQQLH 640
           K ++ L   F D+  IYL+ E   RG+LYQ L R +    E  V +K +F +   L  LH
Sbjct: 147 KNILRLYGHFHDEKRIYLILEFAGRGELYQHLRRAKRFSEE--VASKYIFQMANALSYLH 204

Query: 641 KLHIVHRDIKPENIFI 688
           K H++HRDIKPENI +
Sbjct: 205 KKHVIHRDIKPENILL 220

>ref|NP_587716.1| protein kinase. [Schizosaccharomyces pombe]
           gi|21541963|sp|O59790|ARK1_SCHPO
           Serine/threonine-protein kinase ark1 (Aurora-related
           kinase 1) gi|7493368|pir||T41298 ser/thr protein kinase
           - fission yeast (Schizosaccharomyces pombe)
          Length = 384

 Score = 76.6 bits (187), Expect = 3e-13
 Identities = 60/196 (30%), Positives = 89/196 (44%), Gaps = 7/196 (3%)
 Frame = +2

Query: 122 LRLDVSGRLDEEAPSREHKHHNRNVDEAERECVFTLEPEP------SSSPGHIYTDLSCF 283
           LRL VS +      S  +   N+    ++         EP      S+ P      +  F
Sbjct: 59  LRLAVSNQRQVNNVSLANGKENKRTSNSKFNSSLRKIEEPIAGVPSSAGPQWREFHIGMF 118

Query: 284 RDLTTLHQGRHSTVWSAVCKRTGRTCVIKGYNRDSLKPRQLNN-VRREIGLLRFFRDTGT 460
                L +G+   V+ A  K+TG    +K  ++  L   ++   VRREI +    R    
Sbjct: 119 EIGKPLGKGKFGRVYLAKEKKTGFIVALKTLHKSELVQSKIEKQVRREIEIQSNLRH--- 175

Query: 461 KGVVALLAAFEDKTMIYLVFEACMRGDLYQLLMRNRGTLHEEFVVTKIVFPLLCVLQQLH 640
           K ++ L   F D+  IYL+ E   RG+LYQ L R +    E  V +K +F +   L  LH
Sbjct: 176 KNILRLYGHFHDEKRIYLILEFAGRGELYQHLRRAKRFSEE--VASKYIFQMANALSYLH 233

Query: 641 KLHIVHRDIKPENIFI 688
           K H++HRDIKPENI +
Sbjct: 234 KKHVIHRDIKPENILL 249

>gb|EAA21610.1| myosin light chain kinase [Plasmodium yoelii yoelii]
          Length = 1913

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 46/131 (35%), Positives = 64/131 (48%)
 Frame = +2

Query: 299  LHQGRHSTVWSAVCKRTGRTCVIKGYNRDSLKPRQLNNVRREIGLLRFFRDTGTKGVVAL 478
            L QG+ STV+  + K+T     IK  N  S+   +   +R EI +LR  R      V+ L
Sbjct: 1504 LGQGKFSTVYRGINKQTNSEFAIKVINNRSVSIYEKELLRSEISILRLLRHPN---VIFL 1560

Query: 479  LAAFEDKTMIYLVFEACMRGDLYQLLMRNRGTLHEEFVVTKIVFPLLCVLQQLHKLHIVH 658
                  K  +Y+  E    G+LY  L+    T   E    KI+  L+  +  LHK  I+H
Sbjct: 1561 KEIINTKETLYISMELVKGGELYDFLLSE--TRLSEIHANKIISQLIKTVAYLHKCGIIH 1618

Query: 659  RDIKPENIFIT 691
            RDIKPENI +T
Sbjct: 1619 RDIKPENILLT 1629

>gb|AAF21062.1| calcium-dependent protein kinase [Dunaliella tertiolecta]
          Length = 595

 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 40/147 (27%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
 Frame = +2

Query: 263 YTDLSCFRDL---TTLHQGRHSTVWSAVCKRTGRTCVIKGYNRDSLK-PRQLNNVRREIG 430
           Y +  C++D    T L +G   T + A  K+TG+ C +K  ++  L  P ++++V++E+ 
Sbjct: 146 YGNTDCWKDYEPGTLLGKGTFGTTYLATEKKTGQKCAVKVISKRKLTTPDEVDDVKKEVQ 205

Query: 431 LLRFFRDTGTKGVVALLAAFEDKTMIYLVFEACMRGDLYQLLMRNRGTLHEEFVVTKIVF 610
           ++      G   VV L   +EDK+ + L  E    G+L+  +++ RG  + E    +++ 
Sbjct: 206 IMHHL--AGHPNVVGLKGVYEDKSNVCLAMEVATGGELFDSIVK-RGH-YSERDAAELIR 261

Query: 611 PLLCVLQQLHKLHIVHRDIKPENIFIT 691
            ++ V+   H + ++HRD+KPEN  ++
Sbjct: 262 TIVSVVAHCHNMGVIHRDLKPENFLLS 288



EST assemble image


clone accession position
1 HCL024h03_r AV640929 1 513
2 HCL023a07_r AV640826 32 514
3 HCL025d10_r AV640963 155 636
4 LCL086a07_r AV630901 208 691




Chlamydomonas reinhardtii
Kazusa DNA Research Institute