KCC002356A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002356A_C01 KCC002356A_c01
cacacatacttatcGCGCGGCTGGAGCTGAAGACAGACCTTCCTTCTAGCCGCGTACATG
CGCTCTGCCTGCGCGCGATAACGCTCCACGATCGCCCGTTTTCGTAAAGTAGCCGTGATA
CTTGACAAAGAGCAATAGCCATGGCGTCGGGAGGAGAGTGCGTGAAGGTAGCAGTGCGCT
GTAGGCCTCTGAACGGCAAGGAGAAGGGCGACAACCGCGCCACCATCGTGGAGGTGGACA
ACAAGACTGGCCAGGTCACGCTAAACAACCCGAAGGGCGACGAGCCCCCGAAGACGTTCA
CATTCGACAATGCCTTCGATTGGAACGTCACCCAGCGCGACGTCTATGATGTGGTCGCGC
GGCCCATCGTTAACAGCGTTATGGATGGCTACAATGGCACCATCTTTGCCTATGGGCAGA
CCGGGACGGGCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002356A_C01 KCC002356A_c01
         (432 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P46869|FL10_CHLRE KINESIN-LIKE PROTEIN FLA10 (KHP1 PROTEIN) g...   139  1e-32
dbj|BAC65540.1| mKIAA0359 protein [Mus musculus]                      121  3e-27
ref|NP_004789.1| kinesin family member 3B; kinesin-like protein ...   121  3e-27
sp|Q61771|KF3B_MOUSE Kinesin-like protein KIF3B (Microtubule plu...   121  3e-27
ref|XP_215883.2| similar to Kinesin-like protein KIF3B (Microtub...   120  6e-27

>sp|P46869|FL10_CHLRE KINESIN-LIKE PROTEIN FLA10 (KHP1 PROTEIN) gi|625961|pir||A53939
           kinesin homolog KHP1 - Chlamydomonas reinhardtii
           gi|497697|gb|AAA21738.1| kinesin-like protein
          Length = 786

 Score =  139 bits (349), Expect = 1e-32
 Identities = 63/96 (65%), Positives = 75/96 (77%), Gaps = 2/96 (2%)
 Frame = +3

Query: 150 GGECVKVAVRCRPLNGKEKGDNRATIVEVDNKTGQVTLNNPKGD--EPPKTFTFDNAFDW 323
           G E VKV VRCRPLNGKEK D R+ IV++D   GQV + NPK D  EPPK FTFD  +DW
Sbjct: 7   GSESVKVVVRCRPLNGKEKADGRSRIVDMDVDAGQVKVRNPKADASEPPKAFTFDQVYDW 66

Query: 324 NVTQRDVYDVVARPIVNSVMDGYNGTIFAYGQTGTG 431
           N  QRDV+D+ ARP+++S ++GYNGTIFAYGQTGTG
Sbjct: 67  NCQQRDVFDITARPLIDSCIEGYNGTIFAYGQTGTG 102

>dbj|BAC65540.1| mKIAA0359 protein [Mus musculus]
          Length = 757

 Score =  121 bits (303), Expect = 3e-27
 Identities = 57/94 (60%), Positives = 71/94 (74%), Gaps = 2/94 (2%)
 Frame = +3

Query: 156 ECVKVAVRCRPLNGKEKGDNRATIVEVDNKTGQVTLNNPKGD--EPPKTFTFDNAFDWNV 329
           E V+V VRCRP+NGKEK  +   +V+VD K GQV++ NPKG   E PKTFTFD  +DWN 
Sbjct: 18  ESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTSHEMPKTFTFDAVYDWNA 77

Query: 330 TQRDVYDVVARPIVNSVMDGYNGTIFAYGQTGTG 431
            Q ++YD   RP+V+SV+ G+NGTIFAYGQTGTG
Sbjct: 78  KQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTG 111

>ref|NP_004789.1| kinesin family member 3B; kinesin-like protein KIF3B; microtubule
           plus end-directed kinesin motor 3B [Homo sapiens]
           gi|3913958|sp|O15066|KF3B_HUMAN Kinesin-like protein
           KIF3B (Microtubule plus end-directed kinesin motor 3B)
           (HH0048) gi|2224659|dbj|BAA20815.1| KIAA0359 [Homo
           sapiens] gi|11228428|emb|CAC16425.1| bA392M18.4 (Kinesin
           family member 3B (KIAA0359)) [Homo sapiens]
          Length = 747

 Score =  121 bits (303), Expect = 3e-27
 Identities = 57/94 (60%), Positives = 71/94 (74%), Gaps = 2/94 (2%)
 Frame = +3

Query: 156 ECVKVAVRCRPLNGKEKGDNRATIVEVDNKTGQVTLNNPKGD--EPPKTFTFDNAFDWNV 329
           E V+V VRCRP+NGKEK  +   +V+VD K GQV++ NPKG   E PKTFTFD  +DWN 
Sbjct: 8   ESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNA 67

Query: 330 TQRDVYDVVARPIVNSVMDGYNGTIFAYGQTGTG 431
            Q ++YD   RP+V+SV+ G+NGTIFAYGQTGTG
Sbjct: 68  KQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTG 101

>sp|Q61771|KF3B_MOUSE Kinesin-like protein KIF3B (Microtubule plus end-directed kinesin
           motor 3B) gi|1363180|pir||A57107 kinesin-related protein
           KIF3B - mouse gi|1060923|dbj|BAA05070.1| KIF3B protein
           [Mus musculus]
          Length = 747

 Score =  121 bits (303), Expect = 3e-27
 Identities = 57/94 (60%), Positives = 71/94 (74%), Gaps = 2/94 (2%)
 Frame = +3

Query: 156 ECVKVAVRCRPLNGKEKGDNRATIVEVDNKTGQVTLNNPKGD--EPPKTFTFDNAFDWNV 329
           E V+V VRCRP+NGKEK  +   +V+VD K GQV++ NPKG   E PKTFTFD  +DWN 
Sbjct: 8   ESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTSHEMPKTFTFDAVYDWNA 67

Query: 330 TQRDVYDVVARPIVNSVMDGYNGTIFAYGQTGTG 431
            Q ++YD   RP+V+SV+ G+NGTIFAYGQTGTG
Sbjct: 68  KQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTG 101

>ref|XP_215883.2| similar to Kinesin-like protein KIF3B (Microtubule plus
           end-directed kinesin motor 3B) [Rattus norvegicus]
          Length = 562

 Score =  120 bits (300), Expect = 6e-27
 Identities = 57/94 (60%), Positives = 70/94 (73%), Gaps = 2/94 (2%)
 Frame = +3

Query: 156 ECVKVAVRCRPLNGKEKGDNRATIVEVDNKTGQVTLNNPKGD--EPPKTFTFDNAFDWNV 329
           E V+V VRCRP+NGKEK      +V+VD K GQV++ NPKG   E PKTFTFD  +DWN 
Sbjct: 8   ESVRVVVRCRPMNGKEKAAAYDKVVDVDVKLGQVSVKNPKGTSHEMPKTFTFDAVYDWNA 67

Query: 330 TQRDVYDVVARPIVNSVMDGYNGTIFAYGQTGTG 431
            Q ++YD   RP+V+SV+ G+NGTIFAYGQTGTG
Sbjct: 68  KQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTG 101



EST assemble image


clone accession position
1 MXL003g05_r BP093124 1 340
2 HCL021h04_r AV640755 15 432




Chlamydomonas reinhardtii
Kazusa DNA Research Institute