Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002349A_C01 KCC002349A_c01
(489 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00090375.1| COG0108: 3,4-dihydroxy-2-butanone 4-phosphate... 60 2e-08
ref|ZP_00029871.1| COG0807: GTP cyclohydrolase II [Burkholderia ... 56 2e-07
ref|NP_301473.1| putative GTP cyclohydrolase II/3,4-dihydroxy-2-... 55 6e-07
ref|NP_347230.1| Riboflavin biosynthes protein RIBA (GTPcyclohyd... 55 6e-07
gb|AAB60877.1| RibA [Mycobacterium tuberculosis] 54 8e-07
>ref|ZP_00090375.1| COG0108: 3,4-dihydroxy-2-butanone 4-phosphate synthase [Azotobacter
vinelandii]
Length = 506
Score = 59.7 bits (143), Expect = 2e-08
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Frame = +3
Query: 240 QQGAPITSSNPYVPTAHQSIDEDNVLTSFIAETLLPTRHGKFRLRGYKHS---------- 389
+ G PI S + E +L AET LPTRHG+FRL Y +
Sbjct: 285 EHGLPIVSIEQLIAWRRAQAPEPRLL----AETRLPTRHGEFRLHLYAYQGGEYPLLLAG 340
Query: 390 ------VAVRVHDACFTSEVLGSLKCDCAEQLELALRMI 488
+ R+H C T + GSL+CDC EQ +LAL I
Sbjct: 341 EVAGEGLLTRLHSECLTGDAFGSLRCDCGEQFDLALARI 379
>ref|ZP_00029871.1| COG0807: GTP cyclohydrolase II [Burkholderia fungorum]
Length = 253
Score = 56.2 bits (134), Expect = 2e-07
Identities = 41/119 (34%), Positives = 55/119 (45%), Gaps = 21/119 (17%)
Frame = +3
Query: 195 LPSRVLVSAAAA--DVPQQGAPITSSNPYVPTAHQSIDEDNVLTSFIAETLLPTRHGKFR 368
LPS L+ P A +TS +P P A +++ + V+ A LPTR+G F
Sbjct: 17 LPSPYLIPGLIGFMSAPLSNAMLTSHDPS-PAADGALNGECVVLD--ATATLPTRYGTFT 73
Query: 369 LRGY-------------------KHSVAVRVHDACFTSEVLGSLKCDCAEQLELALRMI 488
+ K SV R+H C T +VLGS +CDC EQL+LALR I
Sbjct: 74 SYVFRVCESGAEHLALVMGDVANKSSVLTRLHSECLTGDVLGSYRCDCGEQLDLALRYI 132
>ref|NP_301473.1| putative GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate
synthase [Mycobacterium leprae] gi|25290321|pir||G86978
hypothetical protein ribA [imported] - Mycobacterium
leprae gi|13092758|emb|CAC30067.1| putative GTP
cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate
synthase [Mycobacterium leprae]
Length = 435
Score = 54.7 bits (130), Expect = 6e-07
Identities = 29/77 (37%), Positives = 38/77 (48%), Gaps = 23/77 (29%)
Frame = +3
Query: 327 IAETLLPTRHGKFRLRGY-------KH----------------SVAVRVHDACFTSEVLG 437
+AE +PTRHG+FR GY KH + VRVH C T +V G
Sbjct: 222 VAEARIPTRHGEFRAIGYTSIYDDVKHVALVRGEIAGSSGDGDDILVRVHSECLTGDVFG 281
Query: 438 SLKCDCAEQLELALRMI 488
S +CDC QL+ A+ M+
Sbjct: 282 SRRCDCGTQLDAAMAMV 298
>ref|NP_347230.1| Riboflavin biosynthes protein RIBA
(GTPcyclohydrolase/3,4-dihydroxy-2-butanone 4-phosphate
synthase) [Clostridium acetobutylicum]
gi|25290327|pir||G96972 hypothetical protein CAC0592
[imported] - Clostridium acetobutylicum
gi|15023461|gb|AAK78570.1|AE007574_8 Riboflavin
biosynthes protein RIBA
(GTPcyclohydrolase/3,4-dihydroxy-2-butanone 4-phosphate
synthase) [Clostridium acetobutylicum]
Length = 401
Score = 54.7 bits (130), Expect = 6e-07
Identities = 29/72 (40%), Positives = 36/72 (49%), Gaps = 19/72 (26%)
Frame = +3
Query: 330 AETLLPTRHGKFRLRGYK-------------------HSVAVRVHDACFTSEVLGSLKCD 452
AE LPT++G+F++ GYK V VRVH C T +V GSL+CD
Sbjct: 212 AEAKLPTKYGEFKIVGYKSLIDNKENLAIVKGELKAEEEVLVRVHSKCLTGDVFGSLRCD 271
Query: 453 CAEQLELALRMI 488
C QL AL I
Sbjct: 272 CGNQLSYALSAI 283
>gb|AAB60877.1| RibA [Mycobacterium tuberculosis]
Length = 425
Score = 54.3 bits (129), Expect = 8e-07
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 23/77 (29%)
Frame = +3
Query: 327 IAETLLPTRHGKFRLRGYKH-----------------------SVAVRVHDACFTSEVLG 437
+AE +PTRHG+FR GY V VRVH C T +V G
Sbjct: 212 VAEARIPTRHGEFRAIGYTSIYEDVEHVALVRGEIAGPNADGDDVLVRVHSECLTGDVFG 271
Query: 438 SLKCDCAEQLELALRMI 488
S +CDC QL+ AL M+
Sbjct: 272 SRRCDCGPQLDAALAMV 288
