KCC002336A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002336A_C01 KCC002336A_c01
cgacaacggccccgcgcagtacagcgtgatggcgcgcggccgcgacctgaacgaccccgg
gcagctgcagcacctgtcggACATGGGCATCCAGGAGAACGAGGACGGCGTGATTGAGGT
GTACCGCGTGCGCCTGCCACACAACAAGTACTCGGGCCGCGGCGTGATCATCGGTGAGGG
CAAGCCCGAGAACCAGAACCACGCCGTCATCTTCGCCTTCGGGGAGGGCCTGCAGGCCAT
TGATATGAACCAGGACAACGTGCTGGCCGAGTGCTTCAAGAGCCGCAACCTGTTGTCGGA
GCTGCTGCCCAGCACCAAGGGCGAGTTCCACCTGTTCGCGGACGACGACGAGGAGGTTGC
CATCACGCGCAAGACCATCGCCAGCGAGCTGATGTACGTCATGCGCTGCCGGCAGGTGCA
GTGCACCTACACGGCGCTCGTGGGCTTCCGCGAGTGGATCTTCTCCGAGAAGTCGGGCGC
GCTGGGCCGCTTCGCCGCCGCCACCGAGTACGCGTTCGGCACCATCACGCAGCGCACGCT
GACGCACCCCGCACGCATGCGCCTGCACTACGGCCACCCCGACCTGTTCAACAAGATGTT
CGTGATGACACGCGGCGGCATCTCCAAGGCCACGCGCCAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002336A_C01 KCC002336A_c01
         (641 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_196804.2| callose synthase (1,3-beta-glucan synthase) fam...   132  6e-30
pir||T49914 callose synthase catalytic subunit-like protein - Ar...   132  6e-30
pir||F86200 protein F12K11.17 [imported] - Arabidopsis thaliana ...   130  1e-29
ref|NP_172136.1| callose synthase (1,3-beta-glucan synthase) fam...   130  1e-29
gb|AAP84973.1| callose synthase-like protein [Oryza sativa (japo...   129  3e-29

>ref|NP_196804.2| callose synthase (1,3-beta-glucan synthase) family [Arabidopsis
            thaliana]
          Length = 1889

 Score =  132 bits (331), Expect = 6e-30
 Identities = 77/183 (42%), Positives = 101/183 (55%)
 Frame = +2

Query: 89   IQENEDGVIEVYRVRLPHNKYSGRGVIIGEGKPENQNHAVIFAFGEGLQAIDMNQDNVLA 268
            + +N D VI  YR+RLP         I+GEGKPENQNHA+IF+ GEGLQ IDMNQDN + 
Sbjct: 1344 LAQNLDQVI--YRIRLPGP------AILGEGKPENQNHAIIFSRGEGLQTIDMNQDNYME 1395

Query: 269  ECFKSRNLLSELLPSTKGEFHLFADDDEEVAITRKTIASELMYVMRCRQVQCTYTALVGF 448
            E  K RNLL E L    G  H                                  +++G 
Sbjct: 1396 EALKMRNLLQEFLTKHDGVRH---------------------------------PSILGL 1422

Query: 449  REWIFSEKSGALGRFAAATEYAFGTITQRTLTHPARMRLHYGHPDLFNKMFVMTRGGISK 628
            RE IF+    +L  F +  E +F TI QR L +P R+R HYGHPD+F+++F +TRGG+SK
Sbjct: 1423 REHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLRVRFHYGHPDVFDRLFHLTRGGVSK 1482

Query: 629  ATR 637
            A++
Sbjct: 1483 ASK 1485

>pir||T49914 callose synthase catalytic subunit-like protein - Arabidopsis
            thaliana gi|7630056|emb|CAB88264.1| callose synthase
            catalytic subunit-like protein [Arabidopsis thaliana]
          Length = 1963

 Score =  132 bits (331), Expect = 6e-30
 Identities = 77/183 (42%), Positives = 101/183 (55%)
 Frame = +2

Query: 89   IQENEDGVIEVYRVRLPHNKYSGRGVIIGEGKPENQNHAVIFAFGEGLQAIDMNQDNVLA 268
            + +N D VI  YR+RLP         I+GEGKPENQNHA+IF+ GEGLQ IDMNQDN + 
Sbjct: 1344 LAQNLDQVI--YRIRLPGP------AILGEGKPENQNHAIIFSRGEGLQTIDMNQDNYME 1395

Query: 269  ECFKSRNLLSELLPSTKGEFHLFADDDEEVAITRKTIASELMYVMRCRQVQCTYTALVGF 448
            E  K RNLL E L    G  H                                  +++G 
Sbjct: 1396 EALKMRNLLQEFLTKHDGVRH---------------------------------PSILGL 1422

Query: 449  REWIFSEKSGALGRFAAATEYAFGTITQRTLTHPARMRLHYGHPDLFNKMFVMTRGGISK 628
            RE IF+    +L  F +  E +F TI QR L +P R+R HYGHPD+F+++F +TRGG+SK
Sbjct: 1423 REHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLRVRFHYGHPDVFDRLFHLTRGGVSK 1482

Query: 629  ATR 637
            A++
Sbjct: 1483 ASK 1485

>pir||F86200 protein F12K11.17 [imported] - Arabidopsis thaliana
            gi|6692688|gb|AAF24822.1|AC007592_15 F12K11.17
            [Arabidopsis thaliana]
          Length = 1930

 Score =  130 bits (328), Expect = 1e-29
 Identities = 73/174 (41%), Positives = 96/174 (54%)
 Frame = +2

Query: 116  EVYRVRLPHNKYSGRGVIIGEGKPENQNHAVIFAFGEGLQAIDMNQDNVLAECFKSRNLL 295
            E+YR++LP     G    IGEGKPENQNHA+IF  GE LQ IDMNQDN   ECFK RN+L
Sbjct: 1282 EIYRIKLP-----GPPTEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYFEECFKMRNVL 1336

Query: 296  SELLPSTKGEFHLFADDDEEVAITRKTIASELMYVMRCRQVQCTYTALVGFREWIFSEKS 475
             E     +G+ +                                   ++G RE IF+   
Sbjct: 1337 QEFDEGRRGKRN---------------------------------PTILGLREHIFTGSV 1363

Query: 476  GALGRFAAATEYAFGTITQRTLTHPARMRLHYGHPDLFNKMFVMTRGGISKATR 637
             +L  F +  E +F TI QR L +P R+R HYGHPD+F+++F +TRGGISKA++
Sbjct: 1364 SSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRIFHITRGGISKASK 1417

>ref|NP_172136.1| callose synthase (1,3-beta-glucan synthase) family [Arabidopsis
            thaliana]
          Length = 1933

 Score =  130 bits (328), Expect = 1e-29
 Identities = 73/174 (41%), Positives = 96/174 (54%)
 Frame = +2

Query: 116  EVYRVRLPHNKYSGRGVIIGEGKPENQNHAVIFAFGEGLQAIDMNQDNVLAECFKSRNLL 295
            E+YR++LP     G    IGEGKPENQNHA+IF  GE LQ IDMNQDN   ECFK RN+L
Sbjct: 1285 EIYRIKLP-----GPPTEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYFEECFKMRNVL 1339

Query: 296  SELLPSTKGEFHLFADDDEEVAITRKTIASELMYVMRCRQVQCTYTALVGFREWIFSEKS 475
             E     +G+ +                                   ++G RE IF+   
Sbjct: 1340 QEFDEGRRGKRN---------------------------------PTILGLREHIFTGSV 1366

Query: 476  GALGRFAAATEYAFGTITQRTLTHPARMRLHYGHPDLFNKMFVMTRGGISKATR 637
             +L  F +  E +F TI QR L +P R+R HYGHPD+F+++F +TRGGISKA++
Sbjct: 1367 SSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRIFHITRGGISKASK 1420

>gb|AAP84973.1| callose synthase-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 908

 Score =  129 bits (325), Expect = 3e-29
 Identities = 70/174 (40%), Positives = 97/174 (55%)
 Frame = +2

Query: 116 EVYRVRLPHNKYSGRGVIIGEGKPENQNHAVIFAFGEGLQAIDMNQDNVLAECFKSRNLL 295
           ++YR++LP N       ++GEGKPENQNHA+IF  GEGLQ IDMNQ++ + E  K RNLL
Sbjct: 260 DIYRIKLPGN------AMLGEGKPENQNHAIIFTRGEGLQTIDMNQEHYMEETLKMRNLL 313

Query: 296 SELLPSTKGEFHLFADDDEEVAITRKTIASELMYVMRCRQVQCTYTALVGFREWIFSEKS 475
            E L    G                                   Y +++G RE IF+   
Sbjct: 314 QEFLKKHDG---------------------------------VRYPSILGVREHIFTGSV 340

Query: 476 GALGRFAAATEYAFGTITQRTLTHPARMRLHYGHPDLFNKMFVMTRGGISKATR 637
            +L  F +  E +F TI QR L +P R+R HYGHPD+F+++F +TRGG+SKA++
Sbjct: 341 SSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRGGVSKASK 394



EST assemble image


clone accession position
1 LCL027h09_r AV627517 1 274
2 HCL018h04_r AV640595 132 641
3 LCL089c02_r AV631124 237 614




Chlamydomonas reinhardtii
Kazusa DNA Research Institute