>KCC002334A_C01 KCC002334A_c01
ctctgcgctACACAATAGGCTAGCATATGGCTGAGGCCAACCAATACCATGTTAACAGAG
TAATTGGCAGTCATGTGACCCAACCGCGTCCAACTCTATGGGGTTGCCCCTAGCACTATA
GCAGTTATCTAGGCTCGCCCACGCAGAATCTCTTAACAGGTTATGAGCCCCGCGCACGCG
GAGGCGAAACCTAGATAACATGCTAGGCGGCGGCCCCAGCGGTGCCGTGACGAGGACCGA
GTGCGCTTACTAGATTCCTTCACTGTGTGGGAGTAGTTAGCTGGTCCGTGGACAAGCCCG
AAGCCGAAACGGGGAAGACCAACATGGACCTGGACGACAACGCGACATCCGCTGGATGTT
TTCATTAATCTAAACATCATGACTATATAAGCTGGAATTCGGGGTCCGCCGAAATAGCAG
GGTCCGCCGAAGAACGCCATTTCCATCGCACAGTGCAGTCCTGCTTTGGTGAGATAGTGT
GGCCCCGATCTACTGGCAGTCTGGCAACGATTGGGAAAGCGTACGAGCTGGATATGCCGC
AGTCGTCGGGCGGGCGCCAGGGGGAGTTGAATTTGGAACGTGGCGGCAGGGACACCCTAT
CAAATGTTATGGCAGGCCGTGGCTATGAGGGCGTGCCAGAGTGTCCAGTTGTGAGGAATC
GCGGCAATCAGGGGGAGCAACTGTGAAGGCGGGAACACAGCAGGCTTGCTGTGC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002334A_C01 KCC002334A_c01
         (714 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00007674.1| COG0374: Ni,Fe-hydrogenase I large subunit [R...    35  0.89
pir||S12549 hypothetical protein - human herpesvirus 4                 35  1.2
ref|NP_190207.1| expressed protein [Arabidopsis thaliana] gi|113...    33  4.4
gb|AAQ81539.1| hinge connector of long tail fiber distal connect...    33  4.4
ref|NP_493229.1| translational repressor like (1N322) [Caenorhab...    32  9.8

>ref|ZP_00007674.1| COG0374: Ni,Fe-hydrogenase I large subunit [Rhodobacter
           sphaeroides]
          Length = 831

 Score = 35.4 bits (80), Expect = 0.89
 Identities = 38/120 (31%), Positives = 46/120 (37%), Gaps = 4/120 (3%)
 Frame = -1

Query: 672 PDCRDSSQLDTLARPHSHGL-P*HLIGCPCRHVPNSTPPGARPTTAAYPARTLSQSLPDC 496
           P C    QL  L R    G  P    G P R  P    P AR   A  PAR   + LPD 
Sbjct: 132 PACGGGGQLRGLRRDDERGRQPLGRDGAPVRGYPRGRHPSARVPGAGRPARGECRGLPDP 191

Query: 495 Q*IG---ATLSHQSRTALCDGNGVLRRTLLFRRTPNSSLYSHDV*INENIQRMSRCRPGP 325
             +G   A  + + RT       V   TLL R +  S L      + + I R+   RP P
Sbjct: 192 SGLGDRDADAARRQRTGGRRSRPVRPPTLLRRSSRASRL------LAQRILRIQGQRPHP 245

>pir||S12549 hypothetical protein - human herpesvirus 4
          Length = 135

 Score = 35.0 bits (79), Expect = 1.2
 Identities = 19/51 (37%), Positives = 21/51 (40%)
 Frame = -1

Query: 711 QQACCVPAFTVAPPDCRDSSQLDTLARPHSHGLP*HLIGCPCRHVPNSTPP 559
           QQ CC P  T A P  R  S L     P     P H +  P  H P + PP
Sbjct: 85  QQPCCSPPATPASPPPRPPSLLILPRSPVGPPAPLHPVPAPLGHAPRARPP 135

>ref|NP_190207.1| expressed protein [Arabidopsis thaliana] gi|11357383|pir||T49262
           hypothetical protein F12M12.180 - Arabidopsis thaliana
           gi|7799009|emb|CAB90948.1| putative protein [Arabidopsis
           thaliana] gi|27808554|gb|AAO24557.1| At3g46210
           [Arabidopsis thaliana]
          Length = 239

 Score = 33.1 bits (74), Expect = 4.4
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = +3

Query: 300 EAETGKTNMDLDDNATSAGCFH*SKHHDYISWNSGSAEIAGS-----AEERHFHRTVQSC 464
           + E G+T   L   A S    H  + H   SW+ G  ++  +     A  +      ++C
Sbjct: 4   DREDGRTPNQLRPLACSRNILH--RPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKAC 61

Query: 465 FGEIVWPRSTGSLATIGKAYEL 530
           F E++W   +G +  + K YE+
Sbjct: 62  F-EVIWKPKSGQIGKVEKEYEM 82

>gb|AAQ81539.1| hinge connector of long tail fiber distal connector; gp36
           [Bacteriophage 44RR2.8t]
          Length = 1420

 Score = 33.1 bits (74), Expect = 4.4
 Identities = 15/49 (30%), Positives = 26/49 (52%)
 Frame = +3

Query: 474 IVWPRSTGSLATIGKAYELDMPQSSGGRQGELNLERGGRDTLSNVMAGR 620
           ++W  ++  +  IGK+Y + + Q +G   G +  E G RD    + AGR
Sbjct: 703 VLWGSTSHDVLHIGKSYGVGIRQGNGASNGHIYTEDGSRDFDKLITAGR 751

>ref|NP_493229.1| translational repressor like (1N322) [Caenorhabditis elegans]
           gi|7508787|pir||T24625 hypothetical protein W02A11.1 -
           Caenorhabditis elegans gi|3879583|emb|CAB04711.1|
           Hypothetical protein W02A11.1 [Caenorhabditis elegans]
           gi|3880444|emb|CAB04894.1| Hypothetical protein W02A11.1
           [Caenorhabditis elegans]
          Length = 312

 Score = 32.0 bits (71), Expect = 9.8
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
 Frame = -1

Query: 552 RPT----TAAYPARTLSQSLPDCQ*IGATLSHQSRTALCD---GNGVLRRTLLFRRTPNS 394
           RPT    T A P RT      DC  I + L  +  + +C+   G+G L   +     P  
Sbjct: 73  RPTSDLWTRALPRRTQILYTADCAQILSLLDAKPGSVICESGTGSGSLSHAIALTVAPTG 132

Query: 393 SLYSHDV 373
            LY+HD+
Sbjct: 133 HLYTHDI 139

EST assemble image

clone accession position 1 HCL045h10_r AV642121 1 441 2 HCL059e07_r AV642865 10 529 3 HCL018e09_r AV640575 244 714

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