KCC002332A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002332A_C01 KCC002332A_c01
ttgtagctttGTTCACATTGCTCACACGCAACGCCGCGTTTAAGACTGCTGGGTCGATTC
GGCGTCGTTCCGGCTCTCCAGCGAGACGCTTCGCCTGCTACTGCAACACGAGGCGTCGGC
CTGTCACCAGGCTCCAACATGGGCCTCAGAGAACTTGTCCTGGGCGGTCCGCTGGGTAGG
AAAGATGCGCTAGGCGCTAAATGCGCACGAATTGACAGTTTAGGTCTGGCAAGAAGGCGT
CTTGCCAAGGGTAAAGAGCAAGAGGAGCTTGGGATTGAAGAGCCGGGGCCGGATGACGGT
GAGGTGCCAGCAGCAAGCGCCGAGGAGGTCGCATTGCAGCCTGCAGAGGAAGGGGACGTC
GACTCGGACGCGGAGCTCAAGACACCGCTGGCAAACCGTCACCTGAACGACTCACTGCGC
CTGGCTCGCCGTCGGTTTCGGGAGCGGGCAAGCATAGACATCGGCGCAACGGCGCGGTCT
GGTGCGGGGCCAAGTAACCTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002332A_C01 KCC002332A_c01
         (501 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P14328|SP96_DICDI Spore coat protein SP96 gi|84145|pir||S0763...    47  2e-04
gb|AAO50776.1| similar to Dictyostelium discoideum (Slime mold)....    47  2e-04
gb|AAO52285.1| similar to Leishmania major. Ppg3 [Dictyostelium ...    45  4e-04
ref|NP_872435.1| hypothetical protein FLJ35107 [Homo sapiens] gi...    45  4e-04
pir||T46707 proteophosphoglycan, membrane-associated [imported] ...    45  7e-04

>sp|P14328|SP96_DICDI Spore coat protein SP96 gi|84145|pir||S07638 spore coat protein
           SP96 precursor - slime mold  (Dictyostelium discoideum)
           gi|295736|emb|CAA34508.1| spore coat protein sp96
           [Dictyostelium discoideum]
          Length = 600

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 30/81 (37%), Positives = 45/81 (55%)
 Frame = -2

Query: 392 ASGVLSSASESTSPSSAGCNATSSALAAGTSPSSGPGSSIPSSSCSLPLARRLLARPKLS 213
           +S    S++ S+SPSS+  +++ S+ AA +SPSS   SS PSSS S        + P  S
Sbjct: 447 SSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSS------SSPSSS 500

Query: 212 IRAHLAPSASFLPSGPPRTSS 150
             +  APS+S   S  P +S+
Sbjct: 501 ASSSSAPSSSASSSSAPSSSA 521

 Score = 44.3 bits (103), Expect = 9e-04
 Identities = 33/83 (39%), Positives = 45/83 (53%), Gaps = 3/83 (3%)
 Frame = -2

Query: 389 SGVLSSASEST-SPSSAGCNATSSALAAGTSPSSGPGSSIPSSSC--SLPLARRLLARPK 219
           S  L S SES+ S SSA  ++ S + AA +SPSS   SS PSSS   S P +    + P 
Sbjct: 429 SSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPS 488

Query: 218 LSIRAHLAPSASFLPSGPPRTSS 150
            S  +  +PS+S   S  P +S+
Sbjct: 489 SSASSSSSPSSSASSSSAPSSSA 511

 Score = 38.1 bits (87), Expect = 0.061
 Identities = 29/71 (40%), Positives = 37/71 (51%)
 Frame = -2

Query: 467 APMSMLARSRNRRRARRSESFR*RFASGVLSSASESTSPSSAGCNATSSALAAGTSPSSG 288
           +P S  A S     A  S       +S   SSAS S+SPSS+   ++SSA ++  S SS 
Sbjct: 459 SPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSA--SSSSAPSSSASSSSA 516

Query: 287 PGSSIPSSSCS 255
           P SS  SSS S
Sbjct: 517 PSSSASSSSAS 527

 Score = 36.6 bits (83), Expect = 0.18
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = -2

Query: 494 LGPAPDRAVAPMSMLARSRNRRRARRSESFR*RFASGVLSSASESTSPSSAGCNATSSAL 315
           LG   + + +  S ++ S +   A  S       +S   SSA+ S+  SSA  ++ SS+ 
Sbjct: 432 LGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSA 491

Query: 314 AAGTSPSS-GPGSSIPSSSCS 255
           ++ +SPSS    SS PSSS S
Sbjct: 492 SSSSSPSSSASSSSAPSSSAS 512

 Score = 36.6 bits (83), Expect = 0.18
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = -2

Query: 392 ASGVLSSASES---TSPSSAGCNATSSALAAGTSP-SSGPGSSIPSSSCSLPLARRLLAR 225
           +S   SS S S   +SPSS+  +++ S+ AA +SP SS   SS PSSS S   A      
Sbjct: 453 SSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSA------ 506

Query: 224 PKLSIRAHLAPSASFLPSGPPRTSS 150
           P  S  +  APS+S   S    +S+
Sbjct: 507 PSSSASSSSAPSSSASSSSASSSSA 531

 Score = 31.6 bits (70), Expect = 5.7
 Identities = 32/113 (28%), Positives = 50/113 (43%), Gaps = 2/113 (1%)
 Frame = -2

Query: 377 SSASESTSPSSA-GCNATSSALAAGTSPSSGPGSSIPSSSCSLPLARRLLARPKLSIRAH 201
           ++ + STS SSA G  + SSA  +    SS  GSS  SSS S             S  A 
Sbjct: 420 TTTTGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPS-------------SSAAS 466

Query: 200 LAPSASFLPSGPPRT-SSLRPMLEPGDRPTPRVAVAGEASRWRAGTTPNRPSS 45
            +PS+S   S P  + +S  P        +P  + +  ++   + ++ + PSS
Sbjct: 467 SSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSS 519

>gb|AAO50776.1| similar to Dictyostelium discoideum (Slime mold). Spore coat
           protein SP96
          Length = 600

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 30/81 (37%), Positives = 45/81 (55%)
 Frame = -2

Query: 392 ASGVLSSASESTSPSSAGCNATSSALAAGTSPSSGPGSSIPSSSCSLPLARRLLARPKLS 213
           +S    S++ S+SPSS+  +++ S+ AA +SPSS   SS PSSS S        + P  S
Sbjct: 447 SSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSS------SSPSSS 500

Query: 212 IRAHLAPSASFLPSGPPRTSS 150
             +  APS+S   S  P +S+
Sbjct: 501 ASSSSAPSSSASSSSAPSSSA 521

 Score = 44.3 bits (103), Expect = 9e-04
 Identities = 33/83 (39%), Positives = 45/83 (53%), Gaps = 3/83 (3%)
 Frame = -2

Query: 389 SGVLSSASEST-SPSSAGCNATSSALAAGTSPSSGPGSSIPSSSC--SLPLARRLLARPK 219
           S  L S SES+ S SSA  ++ S + AA +SPSS   SS PSSS   S P +    + P 
Sbjct: 429 SSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPS 488

Query: 218 LSIRAHLAPSASFLPSGPPRTSS 150
            S  +  +PS+S   S  P +S+
Sbjct: 489 SSASSSSSPSSSASSSSAPSSSA 511

 Score = 38.1 bits (87), Expect = 0.061
 Identities = 29/71 (40%), Positives = 37/71 (51%)
 Frame = -2

Query: 467 APMSMLARSRNRRRARRSESFR*RFASGVLSSASESTSPSSAGCNATSSALAAGTSPSSG 288
           +P S  A S     A  S       +S   SSAS S+SPSS+   ++SSA ++  S SS 
Sbjct: 459 SPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSA--SSSSAPSSSASSSSA 516

Query: 287 PGSSIPSSSCS 255
           P SS  SSS S
Sbjct: 517 PSSSASSSSAS 527

 Score = 36.6 bits (83), Expect = 0.18
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = -2

Query: 494 LGPAPDRAVAPMSMLARSRNRRRARRSESFR*RFASGVLSSASESTSPSSAGCNATSSAL 315
           LG   + + +  S ++ S +   A  S       +S   SSA+ S+  SSA  ++ SS+ 
Sbjct: 432 LGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSA 491

Query: 314 AAGTSPSS-GPGSSIPSSSCS 255
           ++ +SPSS    SS PSSS S
Sbjct: 492 SSSSSPSSSASSSSAPSSSAS 512

 Score = 36.6 bits (83), Expect = 0.18
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = -2

Query: 392 ASGVLSSASES---TSPSSAGCNATSSALAAGTSP-SSGPGSSIPSSSCSLPLARRLLAR 225
           +S   SS S S   +SPSS+  +++ S+ AA +SP SS   SS PSSS S   A      
Sbjct: 453 SSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSA------ 506

Query: 224 PKLSIRAHLAPSASFLPSGPPRTSS 150
           P  S  +  APS+S   S    +S+
Sbjct: 507 PSSSASSSSAPSSSASSSSASSSSA 531

 Score = 31.6 bits (70), Expect = 5.7
 Identities = 32/113 (28%), Positives = 50/113 (43%), Gaps = 2/113 (1%)
 Frame = -2

Query: 377 SSASESTSPSSA-GCNATSSALAAGTSPSSGPGSSIPSSSCSLPLARRLLARPKLSIRAH 201
           ++ + STS SSA G  + SSA  +    SS  GSS  SSS S             S  A 
Sbjct: 420 TTTTGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPS-------------SSAAS 466

Query: 200 LAPSASFLPSGPPRT-SSLRPMLEPGDRPTPRVAVAGEASRWRAGTTPNRPSS 45
            +PS+S   S P  + +S  P        +P  + +  ++   + ++ + PSS
Sbjct: 467 SSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSS 519

>gb|AAO52285.1| similar to Leishmania major. Ppg3 [Dictyostelium discoideum]
          Length = 474

 Score = 45.4 bits (106), Expect = 4e-04
 Identities = 40/119 (33%), Positives = 60/119 (49%), Gaps = 1/119 (0%)
 Frame = -2

Query: 383 VLSSASESTSPSSAGCNATSSALAAGTSPSSGPGSSIPSSSCSLPLARRLLARPKLSIRA 204
           V  S+S S+SPSS+   + SS+    +SPSS P SS  SS  SLP +   + +P  S  +
Sbjct: 76  VSPSSSPSSSPSSSPSVSPSSS--PSSSPSSSPSSSPSSSPSSLPSSSPSV-QPSSSPSS 132

Query: 203 HLAPSASFLPSGPPRTS-SLRPMLEPGDRPTPRVAVAGEASRWRAGTTPNRPSSLKRGV 30
             + S S  PS  P +S S++P   P   P+         S   + ++ ++ SS  RGV
Sbjct: 133 SPSSSPSAQPSSSPSSSQSVQPSSSPSSSPS---TTPSSPSETHSSSSHSQDSSAPRGV 188

>ref|NP_872435.1| hypothetical protein FLJ35107 [Homo sapiens]
           gi|21751020|dbj|BAC03887.1| unnamed protein product
           [Homo sapiens] gi|33872427|gb|AAH16304.1| FLJ35107
           protein [Homo sapiens]
          Length = 258

 Score = 45.4 bits (106), Expect = 4e-04
 Identities = 37/117 (31%), Positives = 59/117 (49%), Gaps = 6/117 (5%)
 Frame = -2

Query: 377 SSASESTSPSSAGCNATSSALAAGTSPSSGPGSSI--PSSSCSLPLARRLLARPKLSIRA 204
           SS+S S+SPSS+  +++SS  ++ +SPSS   SS   PSSS S P +    +    S  +
Sbjct: 110 SSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPS 169

Query: 203 HLAPSAS----FLPSGPPRTSSLRPMLEPGDRPTPRVAVAGEASRWRAGTTPNRPSS 45
             +PS+S       +  P +SS  P       P+PR +    +S   +  + + PSS
Sbjct: 170 SSSPSSSGSSPSSSNSSPSSSSSSPS-SSSSSPSPRSSSPSSSSSSTSSPSTSSPSS 225

 Score = 41.2 bits (95), Expect = 0.007
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = -2

Query: 443 SRNRRRARRSESFR*RFASGVLSSASESTSPSSAGCNATSSALAAGTSPSSGPGSSIPSS 264
           SR+   + RS       +S + SS+S S+SPSS+  +++ S+  + +SPSS   +S PSS
Sbjct: 35  SRSSSSSSRSILSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSS 94

Query: 263 SCSLPLARRLLARPKLSIRAHLAP-SASFLPSGPPRTSSLRP 141
           S S   +    +    S  +  +P S+S   S  P +SS  P
Sbjct: 95  SSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSP 136

 Score = 35.0 bits (79), Expect = 0.52
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
 Frame = -2

Query: 392 ASGVLSSASESTSPSSAGCNATSSALAAGTSPSSGPGSSIPSS---SCSLPLARRLLARP 222
           +S   S +S S+SPS    + +SS+ +  +  +S P SS PSS   S S P A  L  RP
Sbjct: 188 SSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSSPSSSCPSA-ALGRRP 246

Query: 221 KLSIRAHLAP 192
           +    +H AP
Sbjct: 247 QSPQSSHCAP 256

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
 Frame = -2

Query: 377 SSASESTSPSSAGCNAT---SSALAAGTSPSSGPGSSIPSSSCSLPLARRLLARPKLSIR 207
           SS+  S+SPSS+   ++   SS+ ++ +SPSS   SS  SSS S P +    +    S  
Sbjct: 75  SSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSS--SSSSSSPSSSSSSSSSSPSSS 132

Query: 206 AHLAPSASFLPSGPPRTSSLRP 141
           +    S+S   S  P +SS  P
Sbjct: 133 SSSPSSSSSSSSSSPSSSSSSP 154

>pir||T46707 proteophosphoglycan, membrane-associated [imported] - Leishmania
           major (fragment) gi|5420389|emb|CAB46680.1|
           proteophosphoglycan [Leishmania major]
          Length = 383

 Score = 44.7 bits (104), Expect = 7e-04
 Identities = 50/153 (32%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
 Frame = -2

Query: 488 PAPDRAVAPM--SMLARSRNRRRARRSESFR*RFASGVLSSASESTSPSSAGCNATSSAL 315
           P+   + AP   S  A S +   A  + S     +S    SAS S++PSS+    ++S+ 
Sbjct: 49  PSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSS 108

Query: 314 AAGTSPSSGPG---SSIPSSSCSLPLARRLLARPKLSIRAHLAPSASFLPSGPPRTSSLR 144
           +A +S SS P    SS PSSS S P A    A    S  +  APSAS   S P  +SS  
Sbjct: 109 SAPSSSSSAPSASSSSAPSSSSSAPSASSSSAP---SSSSSSAPSAS-SSSAPSSSSSSA 164

Query: 143 PMLEPGDRPTPRVAVAGEASRWRAGTTPNRPSS 45
           P       P+   + A  AS   + + P+  SS
Sbjct: 165 PSASSSSAPSSSSSSAPSAS---SSSAPSSSSS 194

 Score = 42.4 bits (98), Expect = 0.003
 Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
 Frame = -2

Query: 392 ASGVLSSASESTSPSSAGCNATSSALAAGTSPSSGPG---SSIPSSSCSLPLARRLLARP 222
           +S    SAS S++PSS+    ++S+ +A +S SS P    SS PSSS S   +    + P
Sbjct: 6   SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAP 65

Query: 221 KLSIRAHLAPSASFLPSGPPRTSSLRPMLEPGDRPTPRVAVAGEASRWRAGTTPNRPSS 45
             S  +  APSAS   S  P +SS  P       P+   +    +S     ++ + PS+
Sbjct: 66  SSS--SSSAPSAS--SSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSA 120

 Score = 40.4 bits (93), Expect = 0.012
 Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
 Frame = -2

Query: 392 ASGVLSSASESTSPSSAGCNA--TSSALAAGTSPSSGPG---SSIPSSSCSLPLARRLLA 228
           +S    SAS S++PSS+  +A   SS+ A  +S SS P    SS PSSS S P A    A
Sbjct: 144 SSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSA 203

Query: 227 RPKLSIRAHLAPSAS--FLPSGPPRTSSLRPMLEPGDRP 117
               S  A  A S+S     S  P +SS    ++P   P
Sbjct: 204 PSSSSSSAPSASSSSAPSSSSSAPSSSSTTTTMDPTPDP 242

 Score = 38.5 bits (88), Expect = 0.047
 Identities = 42/136 (30%), Positives = 61/136 (43%), Gaps = 1/136 (0%)
 Frame = -2

Query: 488 PAPDRAVAPMSML-ARSRNRRRARRSESFR*RFASGVLSSASESTSPSSAGCNATSSALA 312
           P+   + AP S   A S +   A  S S     +S    S+S S++PS++  +A SS+ +
Sbjct: 103 PSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSS 162

Query: 311 AGTSPSSGPGSSIPSSSCSLPLARRLLARPKLSIRAHLAPSASFLPSGPPRTSSLRPMLE 132
           +  S SS   SS PSSS S   +    + P  S     APSAS   S P  +SS  P   
Sbjct: 163 SAPSASS---SSAPSSSSSSAPSASSSSAPSSS---SSAPSAS-SSSAPSSSSSSAPSAS 215

Query: 131 PGDRPTPRVAVAGEAS 84
               P+   +    +S
Sbjct: 216 SSSAPSSSSSAPSSSS 231



EST assemble image


clone accession position
1 LCL019h03_r AV627016 1 501
2 LCL076f11_r AV630286 11 359
3 HCL018d10_r AV640566 21 287




Chlamydomonas reinhardtii
Kazusa DNA Research Institute