Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002328A_C01 KCC002328A_c01
(568 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00089512.1| COG0847: DNA polymerase III, epsilon subunit ... 34 1.2
ref|NP_927754.1| hypothetical protein [Photorhabdus luminescens ... 33 2.1
ref|NP_032433.1| inter-alpha trypsin inhibitor, heavy chain 3 [M... 33 2.7
gb|AAH15276.1| Inter-alpha trypsin inhibitor, heavy chain 3 [Mus... 33 2.7
ref|NP_195723.1| expressed protein [Arabidopsis thaliana] gi|306... 33 3.5
>ref|ZP_00089512.1| COG0847: DNA polymerase III, epsilon subunit and related 3'-5'
exonucleases [Azotobacter vinelandii]
Length = 323
Score = 34.3 bits (77), Expect = 1.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 293 SERHGQPHYGHGSTVTHVGRPAKRELRR*TGECKRKRKPKLTLTHETDGE 144
+ R G+P GH RP+++ RR G+ +R+R+P+ T GE
Sbjct: 27 ARRAGRPPSGHLGLGARAYRPSRQRTRRSAGQPRRRRRPRAEETRRLGGE 76
>ref|NP_927754.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii
TTO1] gi|36783834|emb|CAE12696.1| unnamed protein
product [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 202
Score = 33.5 bits (75), Expect = 2.1
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 245 GLRLSRDHNAVGRVFHYQVMRCLVIVFCVQHLCVLYWRGFAVGLGSIAGEARARKNVWF 421
GL ++ G + Y ++ ++V + LC + W GF GS+ G +N WF
Sbjct: 128 GLGAVGSYSIAGDHYLYSIIVISIVVMFINFLCGMVWAGF----GSLIGTLLRSRNAWF 182
>ref|NP_032433.1| inter-alpha trypsin inhibitor, heavy chain 3 [Mus musculus]
gi|3024069|sp|Q61704|ITH3_MOUSE Inter-alpha-trypsin
inhibitor heavy chain H3 precursor (ITI heavy chain H3)
(Inter-alpha-inhibitor heavy chain 3)
gi|1083389|pir||S54355 inter-alpha-trypsin inhibitor
heavy chain 3 precursor - mouse
gi|695636|emb|CAA49843.1| inter-alpha-inhibitor H3 chain
[Mus musculus]
Length = 886
Score = 33.1 bits (74), Expect = 2.7
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -3
Query: 377 QGPQQSLAN--IERISVEHRKR*PSNA*LDSERHGQPHYGHGSTVTHVGRPAKRELRR*T 204
QG + +AN + + VE+ P NA LD R+ PH+ GS + GR R +
Sbjct: 458 QGFYEEVANPLLTNVEVEY----PENAILDLTRNSYPHFYDGSEIVVAGRLVDRNMDNFK 513
Query: 203 GECK-RKRKPKLTLTHETDGE 144
+ K LT T E D E
Sbjct: 514 ADVKGHGALNDLTFTEEVDME 534
>gb|AAH15276.1| Inter-alpha trypsin inhibitor, heavy chain 3 [Mus musculus]
Length = 886
Score = 33.1 bits (74), Expect = 2.7
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -3
Query: 377 QGPQQSLAN--IERISVEHRKR*PSNA*LDSERHGQPHYGHGSTVTHVGRPAKRELRR*T 204
QG + +AN + + VE+ P NA LD R+ PH+ GS + GR R +
Sbjct: 458 QGFYEEVANPLLTNVEVEY----PENAILDLTRNSYPHFYDGSEIVVAGRLVDRNMDNFK 513
Query: 203 GECK-RKRKPKLTLTHETDGE 144
+ K LT T E D E
Sbjct: 514 ADVKGHGALNDLTFTEEVDME 534
>ref|NP_195723.1| expressed protein [Arabidopsis thaliana]
gi|30679093|ref|NP_850748.1| expressed protein
[Arabidopsis thaliana] gi|11357833|pir||T45943
hypothetical protein F7J8.10 - Arabidopsis thaliana
gi|6759426|emb|CAB69831.1| putative protein [Arabidopsis
thaliana] gi|20465615|gb|AAM20139.1| unknown protein
[Arabidopsis thaliana] gi|26983886|gb|AAN86195.1|
unknown protein [Arabidopsis thaliana]
Length = 744
Score = 32.7 bits (73), Expect = 3.5
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 110 ALSSQEILLGLPRHQFRVLKSALASSFVCIRPFTAAARALQGGQHGLRLSRDHNAVGRV 286
AL+ E+ G+ R +F S L + FVC+ T A++A G+ ++ + VGRV
Sbjct: 686 ALAMTELKTGIYRVEFGSFVSPLQAFFVCVTVLTCASKAKTTGKSSSPMAPPLSPVGRV 744
