Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002326A_C01 KCC002326A_c01
(463 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_629277.1| putative membrane protein [Streptomyces coelico... 49 2e-05
ref|ZP_00092874.1| COG0068: Hydrogenase maturation factor [Azoto... 48 5e-05
dbj|BAB96547.1| putative Pi-transporter homologue B1 [Chlamydomo... 48 6e-05
dbj|BAC83314.1| unknown protein [Oryza sativa (japonica cultivar... 45 4e-04
ref|NP_612737.1| UL112 [Chimpanzee cytomegalovirus] gi|19881123|... 45 5e-04
>ref|NP_629277.1| putative membrane protein [Streptomyces coelicolor A3(2)]
gi|9967640|emb|CAC05758.1| putative membrane protein
[Streptomyces coelicolor A3(2)]
Length = 775
Score = 49.3 bits (116), Expect = 2e-05
Identities = 56/186 (30%), Positives = 68/186 (36%), Gaps = 36/186 (19%)
Frame = +2
Query: 2 GGGVSRGEDGGPAIPA-GRMLAPQD-----GLGPLRGEG---------GPHPSTDSAGHP 136
GGG G GGP P G D GPL G G GP P TD+ G P
Sbjct: 210 GGGARSGATGGPVAPGHGGGTGSFDVTEALAAGPLGGNGNGNGNGNGSGPRPGTDAGGEP 269
Query: 137 SM--LPGHASMGSHVTSHRSGTSSNSRAQGIAVGMDSGQLPVMHGSGGAQASTASP---- 298
LP A G R+ + + G+ +GQ P G G T+ P
Sbjct: 270 RRDDLPYFAGEG------RADQAPGGQQNGL-----NGQSPYGTGPQGPAGPTSGPATGD 318
Query: 299 -RRMPPSM----ALTTAGMEALLVTR----------AAAVGAVGGSGGTGRPPGSDDRTS 433
R PP L TAG A T+ ++G GG GG GRP GS +
Sbjct: 319 SRLTPPPAGDLGGLGTAGGPAAPGTQREPAPNGLRGPGSLGGPGGPGGPGRPAGSGPDAA 378
Query: 434 SVPVGG 451
+ GG
Sbjct: 379 RLGPGG 384
>ref|ZP_00092874.1| COG0068: Hydrogenase maturation factor [Azotobacter vinelandii]
Length = 1078
Score = 48.1 bits (113), Expect = 5e-05
Identities = 53/170 (31%), Positives = 64/170 (37%), Gaps = 36/170 (21%)
Frame = -1
Query: 409 RSPCPAAAAHGTHGR---RPR---HQQRFHASGCECHRRRHSPGRRRARLSATAAVHHWQ 248
R+ PA AA G GR RPR H A G + HR+ PGR R AA +
Sbjct: 118 RAARPAPAAGGDRGRPADRPRRRAHPCHRRAGGADQHRQGLPPGRAHGRPRPGAAGRSRR 177
Query: 247 LPRVHPDR--NALRSAIAAGAAAMGSDVAAH----------GRVPRQHARMAR----AVG 116
P VH +R + L + +G A G D H G VPR+ A A
Sbjct: 178 RPAVHRERRQSGLPGGLRSGRGAQGGDPLGHRGRGQAAQVPGHVPRRRPHAAEQDRPAAA 237
Query: 115 AGVR---------PSLPAQRT*PVLGCQ-----HAAGWNRRAAVFPAADA 8
G R P R P LG Q AG +R +A P A A
Sbjct: 238 PGFRRRGLHRLRPAGQPGHRGDPCLGAQRRGHGRVAGLDRASARHPPARA 287
Score = 32.0 bits (71), Expect = 3.5
Identities = 42/147 (28%), Positives = 47/147 (31%), Gaps = 9/147 (6%)
Frame = +1
Query: 1 RRRRQPRGRRRPCDSSRPHAGTPGRVRSSARGGRAAPQHRQRGPSEHAAWARVHGQPRHF 180
RRR P RR PGR R G A R+ P+ H R G P
Sbjct: 138 RRRAHPCHRRAGGADQHRQGLPPGRAHGRPRPGAAGRSRRR--PAVHRE-RRQSGLPGGL 194
Query: 181 PSQRHQQQ*PSAGHCGRDGLGAVASDARQRWRSGEHGVAPANAAVYGTHNRWHGSVVGDA 360
S R Q GH GR V +R PA A + G
Sbjct: 195 RSGRGAQGGDPLGHRGRGQAAQVPGHVPRRRPHAAEQDRPAAAPGFRRRGLHRLRPAGQP 254
Query: 361 G-GGRGCRGRQRR--------DRETAR 414
G G C G QRR DR +AR
Sbjct: 255 GHRGDPCLGAQRRGHGRVAGLDRASAR 281
>dbj|BAB96547.1| putative Pi-transporter homologue B1 [Chlamydomonas reinhardtii]
Length = 1666
Score = 47.8 bits (112), Expect = 6e-05
Identities = 48/152 (31%), Positives = 62/152 (40%), Gaps = 11/152 (7%)
Frame = +2
Query: 11 VSRGEDGGPAIPAGRMLAPQDGLGPLRGEGGPHPSTDSAGHPSMLPGHASMGSHVTS--- 181
V+RG + G PA AP LGP + GP PS AG A G+ +
Sbjct: 274 VTRGSNAGKDTPAPTP-APGRSLGPYGSDSGPVPSAQHAGRSRSSTAGALGGTRGATGGG 332
Query: 182 --HRSGT---SSNSRAQGIAVGMDSGQLPVMHGSGGAQASTASPRRMPPSMAL---TTAG 337
H SG ++S AQG A D G G G A A+ M P + L +G
Sbjct: 333 GGHGSGLVDGGADSPAQGFARHADLGPTAAAMGMGAAGAAFPLAAGMDPGLLLPVPAPSG 392
Query: 338 MEALLVTRAAAVGAVGGSGGTGRPPGSDDRTS 433
+ + GA GG GG G PP + +TS
Sbjct: 393 HQQHSSQPPSGGGAGGGLGG-GVPPPMERQTS 423
>dbj|BAC83314.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 155
Score = 45.1 bits (105), Expect = 4e-04
Identities = 43/146 (29%), Positives = 59/146 (39%), Gaps = 10/146 (6%)
Frame = -1
Query: 424 VVAAWRSPCPAAAAHGTHGRRPRHQQRFHASGCECHRRRHSPGRRRARLSATAAVHHWQL 245
V A WR AA G HG R R + + A G C R H+ RR+ RL+ W+L
Sbjct: 2 VAAGWRREAREKAASGRHGWR-RRRAAWRARGGTCGERGHA--RRQRRLARRRRRRLWRL 58
Query: 244 PRVHPDRNALRSAIAAG--------AAAMGSDVAAHGRVPRQH-ARMARAVGAGVRPSLP 92
R P R +R A G A++G+ + GR R+H R + G R
Sbjct: 59 AR--PARREVRPAEGTGRWRRLGGCEASVGAVASLRGRRGRRHGGRRGESSRGGDRRGAR 116
Query: 91 AQRT*PVLGCQH-AAGWNRRAAVFPA 17
R H GW+ A+ P+
Sbjct: 117 RARHGAAASLPHWEVGWSEAVAMRPS 142
>ref|NP_612737.1| UL112 [Chimpanzee cytomegalovirus]
gi|19881123|gb|AAM00743.1|AF480884_95 UL112 [chimpanzee
cytomegalovirus]
Length = 731
Score = 44.7 bits (104), Expect = 5e-04
Identities = 42/140 (30%), Positives = 55/140 (39%), Gaps = 11/140 (7%)
Frame = +2
Query: 71 DGLGPLRGEGGPHPSTDSAGHPSMLPGHASMGSHVTSHRSGTSSNSRAQGIAVGMDSGQL 250
DG PLR A M+ S H +SG + A+ +G
Sbjct: 247 DGCSPLR----------DAKRQKMMATQPSQHHHHHESKSGANGGHEAESCVGMSGAGGN 296
Query: 251 PVMHGSG--GAQASTASPRRMPP------SMALTTAGMEALLVTRAAAVGAVGGSGGTGR 406
HG G G+ A+TA RM P S A+ A T A A GA+ G GG+G
Sbjct: 297 SGAHGGGNNGSGATTAGLNRMLPLDGGVTSEAVAFLNYSANNATEAGADGALLGCGGSGN 356
Query: 407 PPGSDD---RTSSVPVGGPS 457
G ++ RT + V GPS
Sbjct: 357 ERGEEESRPRTPKMAVAGPS 376
