KCC002318A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002318A_C01 KCC002318A_c01
tcgatactgTGATCTTGAATTCCTTGAACAGTCCATCTCGTTAGACGCCAACAACAATGC
AGCTCCAGGCGCGCATGCAATTGCGTTCGGCCGGCCCCCGCCGCGCCGGGCCCGTGCCGG
TCCGCGCCATGGCGGGCAGCCGCTTCGCTGACGTGGCGCAGGCGCCGCCCGACCCCATCC
TGGGCGTGAGCGAGGCGTTCAAGGCCTCCACCGACCCCAACAAGCTCAACCTGGGCGTGG
GCGCCTACCGCGACGAGCAGCTTAAGCCCGTGGTGCTCAGCGTGGTCAAGAAGGCGGAGT
CGAAGATCTTCTCCCGCAACGAGAACAAGGAGTACCTGACCATTGAGGGCCTGGACGCCT
TCCGCAAGGCCACCGTGGACCTGTTGCTGGGCGGAGACCACCCCGCCATCAAGGAGGGCC
GTGTGGCTGTGGTGCAGTCGCTGTCGGGCACGGGCAGCCTGCGTGTGGGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002318A_C01 KCC002318A_c01
         (471 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAN76499.1|AF315376_1 aspartate aminotransferase [Phaseolus v...   157  4e-38
pir||S39928 aspartate transaminase (EC 2.6.1.1) chain 2c, isofor...   157  8e-38
pir||S39926 aspartate transaminase (EC 2.6.1.1) chain 2c, isofor...   157  8e-38
pir||S39927 aspartate transaminase (EC 2.6.1.1) chain 2a, isofor...   156  1e-37
pir||S39925 aspartate transaminase (EC 2.6.1.1) chain 2a, isofor...   156  1e-37

>gb|AAN76499.1|AF315376_1 aspartate aminotransferase [Phaseolus vulgaris]
          Length = 461

 Score =  157 bits (398), Expect = 4e-38
 Identities = 82/123 (66%), Positives = 96/123 (77%)
 Frame = +3

Query: 99  RRAGPVPVRAMAGSRFADVAQAPPDPILGVSEAFKASTDPNKLNLGVGAYRDEQLKPVVL 278
           R +G V   A+ GSRF  +  APPDPILGVSEAFKA T   KLNLGVGAYR E+L+P VL
Sbjct: 46  RSSGRVMAVAVNGSRFEGIPMAPPDPILGVSEAFKADTSDVKLNLGVGAYRTEELQPYVL 105

Query: 279 SVVKKAESKIFSRNENKEYLTIEGLDAFRKATVDLLLGGDHPAIKEGRVAVVQSLSGTGS 458
           +VVKKAE+ +  R +NKEYL+IEGL AF KAT +LLLG D+PAIK+ RVA VQ LSGTGS
Sbjct: 106 NVVKKAENLMLERGDNKEYLSIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGS 165

Query: 459 LRV 467
           LR+
Sbjct: 166 LRL 168

>pir||S39928 aspartate transaminase (EC 2.6.1.1) chain 2c, isoform 2, precursor
           - alfalfa
          Length = 453

 Score =  157 bits (396), Expect = 8e-38
 Identities = 80/111 (72%), Positives = 91/111 (81%)
 Frame = +3

Query: 138 SRFADVAQAPPDPILGVSEAFKASTDPNKLNLGVGAYRDEQLKPVVLSVVKKAESKIFSR 317
           SRF  +  APPDPILGVSEAFKA T+  KLNLGVGAYR E+L+P VL+VVKKAE+ +  R
Sbjct: 53  SRFEGIPMAPPDPILGVSEAFKADTNDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLER 112

Query: 318 NENKEYLTIEGLDAFRKATVDLLLGGDHPAIKEGRVAVVQSLSGTGSLRVG 470
            ENKEYL IEGL AF KAT +LLLG D+PAIK+GRVA VQ LSGTGSLR+G
Sbjct: 113 GENKEYLFIEGLAAFNKATAELLLGADNPAIKQGRVATVQGLSGTGSLRLG 163

>pir||S39926 aspartate transaminase (EC 2.6.1.1) chain 2c, isoform 1, precursor
           - alfalfa
          Length = 463

 Score =  157 bits (396), Expect = 8e-38
 Identities = 80/111 (72%), Positives = 91/111 (81%)
 Frame = +3

Query: 138 SRFADVAQAPPDPILGVSEAFKASTDPNKLNLGVGAYRDEQLKPVVLSVVKKAESKIFSR 317
           SRF  +  APPDPILGVSEAFKA T+  KLNLGVGAYR E+L+P VL+VVKKAE+ +  R
Sbjct: 63  SRFEGIPMAPPDPILGVSEAFKADTNDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLER 122

Query: 318 NENKEYLTIEGLDAFRKATVDLLLGGDHPAIKEGRVAVVQSLSGTGSLRVG 470
            ENKEYL IEGL AF KAT +LLLG D+PAIK+GRVA VQ LSGTGSLR+G
Sbjct: 123 GENKEYLFIEGLAAFNKATAELLLGADNPAIKQGRVATVQGLSGTGSLRLG 173

>pir||S39927 aspartate transaminase (EC 2.6.1.1) chain 2a, isoform 2, precursor
           - alfalfa
          Length = 453

 Score =  156 bits (395), Expect = 1e-37
 Identities = 80/111 (72%), Positives = 90/111 (81%)
 Frame = +3

Query: 138 SRFADVAQAPPDPILGVSEAFKASTDPNKLNLGVGAYRDEQLKPVVLSVVKKAESKIFSR 317
           SRF  +  APPDPILGVSEAFKA T   KLNLGVGAYR E+L+P VL+VVKKAE+ +  R
Sbjct: 53  SRFEGIPMAPPDPILGVSEAFKADTSDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLER 112

Query: 318 NENKEYLTIEGLDAFRKATVDLLLGGDHPAIKEGRVAVVQSLSGTGSLRVG 470
            ENKEYL IEGL AF KAT +LLLG D+PAIK+GRVA VQ LSGTGSLR+G
Sbjct: 113 GENKEYLFIEGLAAFNKATAELLLGADNPAIKQGRVATVQGLSGTGSLRLG 163

>pir||S39925 aspartate transaminase (EC 2.6.1.1) chain 2a, isoform 1, precursor
           - alfalfa gi|742305|prf||2009357A Asp aminotransferase
          Length = 463

 Score =  156 bits (395), Expect = 1e-37
 Identities = 80/111 (72%), Positives = 90/111 (81%)
 Frame = +3

Query: 138 SRFADVAQAPPDPILGVSEAFKASTDPNKLNLGVGAYRDEQLKPVVLSVVKKAESKIFSR 317
           SRF  +  APPDPILGVSEAFKA T   KLNLGVGAYR E+L+P VL+VVKKAE+ +  R
Sbjct: 63  SRFEGIPMAPPDPILGVSEAFKADTSDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLER 122

Query: 318 NENKEYLTIEGLDAFRKATVDLLLGGDHPAIKEGRVAVVQSLSGTGSLRVG 470
            ENKEYL IEGL AF KAT +LLLG D+PAIK+GRVA VQ LSGTGSLR+G
Sbjct: 123 GENKEYLFIEGLAAFNKATAELLLGADNPAIKQGRVATVQGLSGTGSLRLG 173



EST assemble image


clone accession position
1 HCL017a03_r AV640477 1 471
2 MXL072a11_r BP097223 10 333




Chlamydomonas reinhardtii
Kazusa DNA Research Institute