KCC002317A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002317A_C01 KCC002317A_c01
agcaagcaaagacacCAAAGAAGAAGTCCGAGGCTCATCTAGCAACAACAACAGCAACCA
GACAAAACCCCAGTCATATGTTTGCTGCCACGTAAGAGCCGCTGGATGTAGAATTACATC
ACGTTGTCGACCCACACGAAGGGCATAACCAATATGGCACGGGCGCGAGGCTCGGGGCCA
AAGGACGCCGGGCTCGTTGCTTACGGCGAGCCTGGCACGTATTATGTGCTGCACGAGACT
TGGCAGGTCGGCAGGCGGTATGAGCTGGTGAGGGTGCTAGGCACGGGCTCATTCAGCAGC
GTGTGCCTCGCCATAGATACGCAGGACAACAACGAGAAGGTCGCCCTGAAGCGCGTTGGG
GACGTGTTTGCATCACTGGAGAACGCCAAGCGTGTGCTGCGGGAGGTGTGCATCATGCGG
CGCCTGGAGCACCCAAACATCGTCCGTCTAAAGGACGTCTTCATCAGGCCGTCGCCCACA
GGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002317A_C01 KCC002317A_c01
         (483 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAA91142.1| MAP kinase-like protein [Trypanosoma brucei]           83  1e-15
dbj|BAB02403.1| mitogen-activated protein kinase [Arabidopsis th...    77  1e-13
ref|NP_188090.1| mitogen-activated protein kinase (MAPK), putati...    77  1e-13
ref|NP_175756.1| mitogen-activated protein kinase (MAPK), putati...    75  3e-13
dbj|BAA77221.1| MAPK-related kinase [Tetrahymena pyriformis]           74  1e-12

>emb|CAA91142.1| MAP kinase-like protein [Trypanosoma brucei]
          Length = 365

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 41/84 (48%), Positives = 63/84 (74%)
 Frame = +1

Query: 220 YYVLHETWQVGRRYELVRVLGTGSFSSVCLAIDTQDNNEKVALKRVGDVFASLENAKRVL 399
           Y V  +T++VGR ++LV+ +G+GS+ SVC A+D +D+ E+VA+KR+  VF+ L+  KR+L
Sbjct: 17  YVVRGQTFEVGRSHKLVKFIGSGSYGSVCSAVD-EDSGERVAIKRIQRVFSDLKEGKRIL 75

Query: 400 REVCIMRRLEHPNIVRLKDVFIRP 471
           RE+ I+  L H N+VRL+  FIRP
Sbjct: 76  REMDILTSLHHTNLVRLRQ-FIRP 98

>dbj|BAB02403.1| mitogen-activated protein kinase [Arabidopsis thaliana]
          Length = 593

 Score = 77.0 bits (188), Expect = 1e-13
 Identities = 36/73 (49%), Positives = 52/73 (70%)
 Frame = +1

Query: 256 RYELVRVLGTGSFSSVCLAIDTQDNNEKVALKRVGDVFASLENAKRVLREVCIMRRLEHP 435
           RY ++ V+G GS+  VC AIDTQ   EKVA+K++ DVF  + +A R+LREV ++R L HP
Sbjct: 19  RYRILEVIGKGSYGVVCAAIDTQ-TGEKVAIKKINDVFEHVSDALRILREVKLLRLLRHP 77

Query: 436 NIVRLKDVFIRPS 474
           +IV +K + + PS
Sbjct: 78  DIVEIKSIMLPPS 90

>ref|NP_188090.1| mitogen-activated protein kinase (MAPK), putative (MPK19)
           [Arabidopsis thaliana]
          Length = 586

 Score = 77.0 bits (188), Expect = 1e-13
 Identities = 36/73 (49%), Positives = 52/73 (70%)
 Frame = +1

Query: 256 RYELVRVLGTGSFSSVCLAIDTQDNNEKVALKRVGDVFASLENAKRVLREVCIMRRLEHP 435
           RY ++ V+G GS+  VC AIDTQ   EKVA+K++ DVF  + +A R+LREV ++R L HP
Sbjct: 12  RYRILEVIGKGSYGVVCAAIDTQ-TGEKVAIKKINDVFEHVSDALRILREVKLLRLLRHP 70

Query: 436 NIVRLKDVFIRPS 474
           +IV +K + + PS
Sbjct: 71  DIVEIKSIMLPPS 83

>ref|NP_175756.1| mitogen-activated protein kinase (MAPK), putative (MPK18)
           [Arabidopsis thaliana] gi|25405642|pir||C96575 probable
           MAP kinase ATMPK9, 98271-101224 [imported] - Arabidopsis
           thaliana gi|8671875|gb|AAF78438.1|AC018748_17 Contains
           similarity to ATMPK8 from Arabidopsis thaliana
           gb|AB038693 and contains a protein kinase PF|00069
           domain. ESTs gb|T04165, gb|AI993011, gb|T21003 come from
           this gene gi|12324029|gb|AAG51978.1|AC024260_16 MAP
           kinase ATMPK9, putative; 98271-101224 [Arabidopsis
           thaliana] gi|24030176|gb|AAN41270.1| putative MAP kinase
           ATMPK9 [Arabidopsis thaliana]
          Length = 603

 Score = 75.5 bits (184), Expect = 3e-13
 Identities = 35/73 (47%), Positives = 51/73 (68%)
 Frame = +1

Query: 256 RYELVRVLGTGSFSSVCLAIDTQDNNEKVALKRVGDVFASLENAKRVLREVCIMRRLEHP 435
           RY ++ V+G GS+  VC AIDT    EKVA+K++ DVF  + +A R+LREV ++R L HP
Sbjct: 12  RYRILEVIGKGSYGVVCAAIDTH-TGEKVAIKKINDVFEHISDALRILREVKLLRLLRHP 70

Query: 436 NIVRLKDVFIRPS 474
           +IV +K + + PS
Sbjct: 71  DIVEIKSIMLPPS 83

>dbj|BAA77221.1| MAPK-related kinase [Tetrahymena pyriformis]
          Length = 430

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 33/75 (44%), Positives = 54/75 (72%)
 Frame = +1

Query: 235 ETWQVGRRYELVRVLGTGSFSSVCLAIDTQDNNEKVALKRVGDVFASLENAKRVLREVCI 414
           + W+ G RYELV+V+G+GS+ SV  AID +   +KVA+KR+  +F    + KR+LRE+ +
Sbjct: 11  QDWEAGDRYELVKVVGSGSYGSVREAIDKK-TGKKVAIKRLNGIFEDNVDCKRILREIHL 69

Query: 415 MRRLEHPNIVRLKDV 459
           +R L HPN++R+ ++
Sbjct: 70  LRILNHPNLIRINEI 84



EST assemble image


clone accession position
1 LCL020c02_r AV627042 1 284
2 HCL016h11_r AV640473 16 483




Chlamydomonas reinhardtii
Kazusa DNA Research Institute