KCC002311A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002311A_C01 KCC002311A_c01
caggccggctacagccctctggacttcctggctcgtgacccgcgcaagtacttttacctg
ggcgagtgcttgtccatggtGGACCTGTCGCTCATGGTCAAGAGCGGCGTCCAGTACAGC
CTGTGGGGCGGCTCTGTGCTCAACCTGGGGTCGGAGGCGCACCGGCGGCGCTACTACGAC
GACATCGCGCAGCTGCGGCTGCCGGGCTGCTTCGCCATGACGGAGCTCAAACACGGCAGC
AACGTGGCTGCGCTGCAGACGGAGGCTGTGCTGGACGTGCTGAGTGACGAGTGGGTGGTG
CACACGCCGGATGAGGGCGCCATCAAGTGGTGGATAGGCAACGCAGCGGAGGACGGCCGC
GCAGCCACCGTGTTCGCCAGGCTCAAGGTGCCGGACCCCAACGGCGGCCCCAAGCTGGTG
GACCATGGCGTGCACGCCTTTGTGGTGCCCATCCGCGACGCCAACGGCAGCACACTGCCG
GGCGTGGAGATCCGGGACTGCGGGTACAAGGTGGGCCTGAACGGCATCGACAACG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002311A_C01 KCC002311A_c01
         (535 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T07901 acyl CoA oxidase homolog - cucurbit gi|3115374|gb|AA...   219  2e-56
ref|NP_201316.1| acyl-CoA oxidase (gb|AAC13497.1) [Arabidopsis t...   218  4e-56
pir||T52120 acyl-CoA oxidase (EC 1.3.3.6), peroxisomal [validate...   218  4e-56
gb|AAB67883.1| acyl-CoA oxidase homolog [Phalaenopsis sp. 'True ...   216  1e-55
gb|AAF14635.1|AF202987_1 acyl-CoA oxidase [Petroselinum crispum]      216  2e-55

>pir||T07901 acyl CoA oxidase homolog - cucurbit gi|3115374|gb|AAC15870.1| acyl
           CoA oxidase homolog [Cucurbita sp. cv. Kurokawa Amakuri]
          Length = 690

 Score =  219 bits (558), Expect = 2e-56
 Identities = 104/179 (58%), Positives = 133/179 (74%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1   QAGYSPLDFLARDPRKYFYLGECLSMVDLSLMVKSGVQYSLWGGSVLNLGSEAHRRRYYD 180
           +AG  P  F+  DP KYF + E +  VD+SL +K GVQ+SLWGGSV+NLG++ HR R++D
Sbjct: 111 EAGIRPFRFVNEDPAKYFAIMEAVGSVDVSLAIKMGVQFSLWGGSVINLGTKKHRDRFFD 170

Query: 181 DIAQLRLPGCFAMTELKHGSNVAALQTEAVLDVLSDEWVVHTPDEGAIKWWIGNAAEDGR 360
            I  +  PGCFAMTEL HGSNV  LQT A  D ++DE++++TP++GAIKWWIGNAA  G+
Sbjct: 171 GIDNVDYPGCFAMTELHHGSNVQGLQTTATFDPITDEFIINTPNDGAIKWWIGNAAVHGK 230

Query: 361 AATVFARLKVPDPNGGPKLVDHGVHAFVVPIRDANG-STLPGVEIRDCGYKVGLNGIDN 534
            ATVFA+L +P  +   K  D GVHAF+VPIRD     TLPG+EI DCG+KVGLNG+DN
Sbjct: 231 FATVFAKLVLP-THDSRKTADMGVHAFIVPIRDLKSHKTLPGIEIHDCGHKVGLNGVDN 288

>ref|NP_201316.1| acyl-CoA oxidase (gb|AAC13497.1) [Arabidopsis thaliana]
           gi|10178173|dbj|BAB11647.1| acyl-CoA oxidase
           [Arabidopsis thaliana]
          Length = 692

 Score =  218 bits (555), Expect = 4e-56
 Identities = 108/179 (60%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1   QAGYSPLDFLARDPRKYFYLGECLSMVDLSLMVKSGVQYSLWGGSVLNLGSEAHRRRYYD 180
           +AG  P  ++A DP KYF + E +  VD+SL +K GVQYSLWGGSV+NLG++ HR +Y+D
Sbjct: 113 EAGVRPFRYVADDPEKYFAIMEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFD 172

Query: 181 DIAQLRLPGCFAMTELKHGSNVAALQTEAVLDVLSDEWVVHTPDEGAIKWWIGNAAEDGR 360
            I  L   GCFAMTEL HGSNV  LQT A  D L DE+V+ TP++GAIKWWIGNAA  G+
Sbjct: 173 GIDNLDYTGCFAMTELHHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAVHGK 232

Query: 361 AATVFARLKVPDPNGGPKLVDHGVHAFVVPIRD-ANGSTLPGVEIRDCGYKVGLNGIDN 534
            ATVFARL +P  +    + D GVHAF+VPIRD     TLPGVEI+DCG+KVGLNG+DN
Sbjct: 233 FATVFARLILP-THDSKGVSDMGVHAFIVPIRDMKTHQTLPGVEIQDCGHKVGLNGVDN 290

>pir||T52120 acyl-CoA oxidase (EC 1.3.3.6), peroxisomal [validated] -
           Arabidopsis thaliana gi|3044212|gb|AAC13497.1| acyl-CoA
           oxidase [Arabidopsis thaliana]
          Length = 692

 Score =  218 bits (555), Expect = 4e-56
 Identities = 108/179 (60%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1   QAGYSPLDFLARDPRKYFYLGECLSMVDLSLMVKSGVQYSLWGGSVLNLGSEAHRRRYYD 180
           +AG  P  ++A DP KYF + E +  VD+SL +K GVQYSLWGGSV+NLG++ HR +Y+D
Sbjct: 113 EAGVRPFRYVADDPEKYFAIMEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFD 172

Query: 181 DIAQLRLPGCFAMTELKHGSNVAALQTEAVLDVLSDEWVVHTPDEGAIKWWIGNAAEDGR 360
            I  L   GCFAMTEL HGSNV  LQT A  D L DE+V+ TP++GAIKWWIGNAA  G+
Sbjct: 173 GIDNLDYTGCFAMTELHHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAVHGK 232

Query: 361 AATVFARLKVPDPNGGPKLVDHGVHAFVVPIRD-ANGSTLPGVEIRDCGYKVGLNGIDN 534
            ATVFARL +P  +    + D GVHAF+VPIRD     TLPGVEI+DCG+KVGLNG+DN
Sbjct: 233 FATVFARLILP-THDSKGVSDMGVHAFIVPIRDMKTHQTLPGVEIQDCGHKVGLNGVDN 290

>gb|AAB67883.1| acyl-CoA oxidase homolog [Phalaenopsis sp. 'True Lady']
          Length = 699

 Score =  216 bits (550), Expect = 1e-55
 Identities = 104/179 (58%), Positives = 130/179 (72%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1   QAGYSPLDFLARDPRKYFYLGECLSMVDLSLMVKSGVQYSLWGGSVLNLGSEAHRRRYYD 180
           +AG  P  +   DP  YF + E +  +D+SL +K GVQYSLWGGSV+NLG++ H+ +Y+ 
Sbjct: 119 EAGIRPFRYAIEDPSVYFAIVEAVGGIDISLGIKLGVQYSLWGGSVMNLGTKKHKEKYFK 178

Query: 181 DIAQLRLPGCFAMTELKHGSNVAALQTEAVLDVLSDEWVVHTPDEGAIKWWIGNAAEDGR 360
            I  +  PGCFAMTEL HGSNV  LQT A  D L+DE+V++TP++GAIKWWIGNAA  G+
Sbjct: 179 GIDNIDYPGCFAMTELHHGSNVQGLQTTATFDPLTDEFVINTPNDGAIKWWIGNAAVHGK 238

Query: 361 AATVFARLKVPDPNGGPKLVDHGVHAFVVPIRD-ANGSTLPGVEIRDCGYKVGLNGIDN 534
            ATVFARL +P    G K +D GVHAF+VPIRD     TLP VEI DCG+KVGLNG+DN
Sbjct: 239 FATVFARLILPFQGKGGKSIDMGVHAFIVPIRDMETHDTLPMVEIHDCGHKVGLNGVDN 297

>gb|AAF14635.1|AF202987_1 acyl-CoA oxidase [Petroselinum crispum]
          Length = 694

 Score =  216 bits (549), Expect = 2e-55
 Identities = 108/181 (59%), Positives = 131/181 (71%), Gaps = 3/181 (1%)
 Frame = +1

Query: 1   QAGYSPLDFLARDPRKYFYLGECLSMVDLSLMVKSGVQYSLWGGSVLNLGSEAHRRRYYD 180
           +AG  P  ++  DP  YF +GE    VD+S  +K GVQYSLWGGSVLNLG++ HR +Y+D
Sbjct: 111 EAGIKPFKYVVDDPFVYFAIGEAAGSVDVSFGIKLGVQYSLWGGSVLNLGTKKHRDKYFD 170

Query: 181 DIAQLRLPGCFAMTELKHGSNVAALQTEAVLDVLSDEWVVHTPDEGAIKWWIGNAAEDGR 360
            I  +  PGCFAMTEL HGSNV  LQT A  D L+DE+V+ TP++GAIKWWIGNAA  G+
Sbjct: 171 AIDNVEYPGCFAMTELHHGSNVQGLQTVATFDPLTDEFVIDTPNDGAIKWWIGNAAVHGK 230

Query: 361 AATVFARLKVP--DPNGGPKLVDHGVHAFVVPIRD-ANGSTLPGVEIRDCGYKVGLNGID 531
            ATVFA+L +P  D  G     D GVHAF+VPIRD     TLPGVEI+DCG+KVGLNG+D
Sbjct: 231 FATVFAKLMLPTHDARG---YSDMGVHAFIVPIRDMETHETLPGVEIQDCGHKVGLNGVD 287

Query: 532 N 534
           N
Sbjct: 288 N 288



EST assemble image


clone accession position
1 HCL081f11_r AV644094 1 535
2 HCL016e05_r AV640448 131 523




Chlamydomonas reinhardtii
Kazusa DNA Research Institute