Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002308A_C01 KCC002308A_c01
(402 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB38779.1| putative cytoskeletal protein [Arabidopsis thaliana] 73 1e-12
gb|AAM13037.1| unknown protein [Arabidopsis thaliana] 72 2e-12
ref|NP_564794.1| octicosapeptide/Phox/Bem1p (PB1) domain-/tetrat... 72 2e-12
ref|NP_014649.1| small glutamine-rich tetratricopeptide repeat c... 66 1e-10
ref|NP_080272.1| RIKEN cDNA 2610100K07 [Mus musculus] gi|1284813... 64 7e-10
>gb|AAB38779.1| putative cytoskeletal protein [Arabidopsis thaliana]
Length = 782
Score = 72.8 bits (177), Expect = 1e-12
Identities = 41/121 (33%), Positives = 67/121 (54%), Gaps = 5/121 (4%)
Frame = +3
Query: 54 RQLAVGPTLDSSERMAKTKTKSPAKPAPAAPANLDTEVA---KKFVELKTEGNQAFARGD 224
R+ G + +S ++ ++T +KP+ +D + + K+ ELK EGN+ F D
Sbjct: 7 RKKKSGGSNSNSSQVNSSETSGLSKPSTIVNGGVDFDASIFLKRAHELKEEGNKKFQARD 66
Query: 225 YAKALNVYDDAIKLLPTTAPERADIYNNKAACFIGQK--RYKEAVKECTSALEVAPNSVR 398
Y AL Y++ IKL+P + P+RA ++N+AAC I K Y+ + EC+ AL+ P R
Sbjct: 67 YVGALEQYENGIKLIPKSHPDRAVFHSNRAACLIEMKPIDYESVISECSMALKSQPGFTR 126
Query: 399 A 401
A
Sbjct: 127 A 127
>gb|AAM13037.1| unknown protein [Arabidopsis thaliana]
Length = 557
Score = 71.6 bits (174), Expect = 2e-12
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Frame = +3
Query: 54 RQLAVGPTLDSSERMAKTKTKSPAKPAPAAPANLDTEVA---KKFVELKTEGNQAFARGD 224
R+ G + +S ++ ++T +KP+ +D + + K+ ELK EGN+ F D
Sbjct: 7 RKKKSGGSNSNSSQVNSSETSGLSKPSTIVNGGVDFDASIFLKRAHELKEEGNKKFQARD 66
Query: 225 YAKALNVYDDAIKLLPTTAPERADIYNNKAACFIGQK--RYKEAVKECTSALEVAPNSVR 398
Y AL Y++ IKL+P + P+RA ++N+AAC + K Y+ + EC+ AL+ P R
Sbjct: 67 YVGALEQYENGIKLIPKSHPDRAVFHSNRAACLMQMKPIDYESVISECSMALKSQPGFTR 126
Query: 399 A 401
A
Sbjct: 127 A 127
>ref|NP_564794.1| octicosapeptide/Phox/Bem1p (PB1) domain-/tetratricopeptide repeat
(TPR)-containing protein [Arabidopsis thaliana]
gi|7484904|pir||T01449 cytoskeletal protein homolog
F24O1.11 - Arabidopsis thaliana
gi|7940289|gb|AAF70848.1|AC003113_15 F2401.12
[Arabidopsis thaliana] gi|19423968|gb|AAL87265.1|
unknown protein [Arabidopsis thaliana]
gi|21281131|gb|AAM45044.1| unknown protein [Arabidopsis
thaliana]
Length = 751
Score = 71.6 bits (174), Expect = 2e-12
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Frame = +3
Query: 54 RQLAVGPTLDSSERMAKTKTKSPAKPAPAAPANLDTEVA---KKFVELKTEGNQAFARGD 224
R+ G + +S ++ ++T +KP+ +D + + K+ ELK EGN+ F D
Sbjct: 7 RKKKSGGSNSNSSQVNSSETSGLSKPSTIVNGGVDFDASIFLKRAHELKEEGNKKFQARD 66
Query: 225 YAKALNVYDDAIKLLPTTAPERADIYNNKAACFIGQK--RYKEAVKECTSALEVAPNSVR 398
Y AL Y++ IKL+P + P+RA ++N+AAC + K Y+ + EC+ AL+ P R
Sbjct: 67 YVGALEQYENGIKLIPKSHPDRAVFHSNRAACLMQMKPIDYESVISECSMALKSQPGFTR 126
Query: 399 A 401
A
Sbjct: 127 A 127
>ref|NP_014649.1| small glutamine-rich tetratricopeptide repeat containing protein;
Sgt2p [Saccharomyces cerevisiae] gi|2132031|pir||S61991
hypothetical protein YOR007c - yeast (Saccharomyces
cerevisiae) gi|1151003|gb|AAC49487.1| hypothetical
protein UNF346 gi|1420100|emb|CAA99195.1| unnamed
protein product [Saccharomyces cerevisiae]
Length = 346
Score = 65.9 bits (159), Expect = 1e-10
Identities = 39/107 (36%), Positives = 57/107 (52%)
Frame = +3
Query: 78 LDSSERMAKTKTKSPAKPAPAAPANLDTEVAKKFVELKTEGNQAFARGDYAKALNVYDDA 257
L+S+ R+ ++ K A+ D E K +LK +GN+A A DY A+N Y +A
Sbjct: 69 LNSASRVPESNKKDDAENVEINIPEDDAETKAKAEDLKMQGNKAMANKDYELAINKYTEA 128
Query: 258 IKLLPTTAPERADIYNNKAACFIGQKRYKEAVKECTSALEVAPNSVR 398
IK+LPT A Y N+AA K Y +AVK+ SA+ + P+ R
Sbjct: 129 IKVLPT----NAIYYANRAAAHSSLKEYDQAVKDAESAISIDPSYFR 171
>ref|NP_080272.1| RIKEN cDNA 2610100K07 [Mus musculus] gi|12848131|dbj|BAB27840.1|
unnamed protein product [Mus musculus]
Length = 309
Score = 63.5 bits (153), Expect = 7e-10
Identities = 37/107 (34%), Positives = 59/107 (54%)
Frame = +3
Query: 81 DSSERMAKTKTKSPAKPAPAAPANLDTEVAKKFVELKTEGNQAFARGDYAKALNVYDDAI 260
D+ + AKTK+K P+ D E AK LK EGN +G++ KA+ Y +++
Sbjct: 164 DNHKETAKTKSKEATATKSRVPSAGDVERAKA---LKEEGNDLVKKGNHKKAIEKYSESL 220
Query: 261 KLLPTTAPERADIYNNKAACFIGQKRYKEAVKECTSALEVAPNSVRA 401
+ + Y+N+A C + K+YKEAVK+CT AL++ +V+A
Sbjct: 221 ----LCSSLESATYSNRALCHLVLKQYKEAVKDCTEALKLDGKNVKA 263
Score = 60.1 bits (144), Expect = 7e-09
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Frame = +3
Query: 183 ELKTEGNQAFARGDYAKALNVYDDAIKLLPTTAP----ERADIYNNKAACFIGQKRYKEA 350
EL+ GNQ+F G YA+A +Y+ A++LL E + +Y+N+AAC++ +
Sbjct: 11 ELRAAGNQSFRNGQYAEASALYERALRLLQARGSADPEEESVLYSNRAACYLKDGNCTDC 70
Query: 351 VKECTSALEVAPNSVR 398
+K+CTSAL + P S++
Sbjct: 71 IKDCTSALALVPFSIK 86
