Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002305A_C01 KCC002305A_c01
(409 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197657.2| histone deacetylase-related protein [Arabidopsi... 53 9e-07
ref|NP_395434.1| putative porphyrin biosynthetic protein [Yersin... 53 1e-06
pir||B42680 nucleolus-cytoplasm shuttle phosphoprotein - rat 53 1e-06
ref|NP_074060.1| nucleolar phosphoprotein p130; nucleolar phosph... 53 1e-06
ref|NP_857691.1| CobT homolog [Yersinia pestis KIM] gi|7467322|p... 53 1e-06
>ref|NP_197657.2| histone deacetylase-related protein [Arabidopsis thaliana]
Length = 223
Score = 53.1 bits (126), Expect = 9e-07
Identities = 40/107 (37%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Frame = +1
Query: 124 ARSDPVDLTVTNMSDSDD-DVPLVKRAAAAPA-------SAKPTPKSTKPTPKPAAAKPV 279
A + P ++ + + SDD DVP A A A A TKP KPA K
Sbjct: 6 ATNPPTSISTDDFTSSDDEDVPEAVPAPAPTAVTANGNAGAAVVKADTKPKAKPAEVK-- 63
Query: 280 ANGRSTPSRKKPEPEPEEE-DDEDESEESSSS----DSESDDSDSDK 405
P+ +KPE + E+E DDEDESEE S D + DDSD D+
Sbjct: 64 ------PAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDE 104
>ref|NP_395434.1| putative porphyrin biosynthetic protein [Yersinia pestis CO92]
gi|31795432|ref|NP_857885.1| putative porphyrin
biosynthetic enzyme [Yersinia pestis KIM]
gi|7467458|pir||T15019 probable porphyrin biosynthetic
enzyme - Yersinia pestis plasmid pMT1
gi|3883102|gb|AAC82762.1| putative porphyrin
biosynthetic enzyme [Yersinia pestis KIM]
gi|5834770|emb|CAB55269.1| putative porphyrin
biosynthetic protein [Yersinia pestis]
Length = 788
Score = 52.8 bits (125), Expect = 1e-06
Identities = 37/124 (29%), Positives = 55/124 (43%), Gaps = 17/124 (13%)
Frame = +1
Query: 88 WAISISPLAKCTARSDPVDLTVTNMSDSDDDVPLVKRAAAAPASAKPTPKSTKPTPKPAA 267
W + P+A + +D+ V NMS+++D V + A K P+ P K +A
Sbjct: 185 WHLIDKPVA--LLKEHGIDVAVRNMSNTEDCVKVAAAIAQIMQDMKDKPEGKLPELKSSA 242
Query: 268 AKPV----------------ANGRSTPSRKKPEPEPEEEDDEDESEESSSSDSESDDS-D 396
KP ++ S P R K E + +EE ++D SEE S DS+ DS D
Sbjct: 243 KKPSKSKDESEETPESGDDPSHSESAPKRTKGEDDDKEEQEDDASEEEDSGDSDLPDSLD 302
Query: 397 SDKP 408
D P
Sbjct: 303 KDLP 306
>pir||B42680 nucleolus-cytoplasm shuttle phosphoprotein - rat
Length = 734
Score = 52.8 bits (125), Expect = 1e-06
Identities = 37/102 (36%), Positives = 49/102 (47%), Gaps = 2/102 (1%)
Frame = +1
Query: 109 LAKCTARSDPVDLTVTNMSDSDDDVPLVKRAAAAPASAKPTPKSTKP--TPKPAAAKPVA 282
++K A+ PV + SDS D A A P SA +P S KP TPKP AAK VA
Sbjct: 385 VSKTPAKPAPVKKKAESSSDSSDSDSSEDEAPAKPVSATKSPLS-KPAVTPKPPAAKAVA 443
Query: 283 NGRSTPSRKKPEPEPEEEDDEDESEESSSSDSESDDSDSDKP 408
+ P+ +P+ + D EESSSS+ E+ P
Sbjct: 444 TPKQ-PAGSGQKPQSRKADSSSSEEESSSSEEEATKKSVTTP 484
Score = 38.9 bits (89), Expect = 0.017
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 163 SDSDDDVPLVKRAAAAPASAK-PTPKSTKPTPKPAAAKPVANGRSTPSRKKPEPEPEEED 339
S S+D+ P ++ AA +AK PT TK KP P K +P+ +
Sbjct: 206 SSSEDEAPQTQKPKAAATAAKAPTKAQTKAPAKPG-----------PPAKA---QPKAAN 251
Query: 340 DEDESEESSSSDSESDDSDSDK 405
+ S SSSS S SDDS+ +K
Sbjct: 252 GKAGSSSSSSSSSSSDDSEEEK 273
Score = 34.3 bits (77), Expect = 0.42
Identities = 26/71 (36%), Positives = 35/71 (48%), Gaps = 11/71 (15%)
Frame = +1
Query: 190 VKRAAAAPASA-----------KPTPKSTKPTPKPAAAKPVANGRSTPSRKKPEPEPEEE 336
VK+AAA +S+ K PKS K TPKP A K ANG K E EEE
Sbjct: 544 VKKAAAESSSSSSSSEDSSEEEKKKPKS-KATPKPQAGK--ANGVPASQNGKAGKESEEE 600
Query: 337 DDEDESEESSS 369
+++ E + ++
Sbjct: 601 EEDTEQNKKAA 611
Score = 32.7 bits (73), Expect = 1.2
Identities = 28/119 (23%), Positives = 48/119 (39%), Gaps = 16/119 (13%)
Frame = +1
Query: 97 SISPLAKCTARSDPVDLTVTNMSDSDDDVPLVKRAAAAPASAKPTPKSTKPTPKPAAAKP 276
S P+AK + + + S+ +D + + AAAPA P+ A K
Sbjct: 101 SNGPVAKKAKKETSSSDSSEDSSEEEDKAQVPTQKAAAPAKRASLPQH--------AGKA 152
Query: 277 VANGRSTPSRKKPEPEPEEEDDEDE----------------SEESSSSDSESDDSDSDK 405
A + S ++ E EE+D + + +++ SS+SESD S D+
Sbjct: 153 AAKASESSSSEESSEEEEEKDKKKKPVQKAVKPQAKAVRPPPKKAESSESESDSSSEDE 211
Score = 30.8 bits (68), Expect = 4.7
Identities = 25/102 (24%), Positives = 44/102 (42%)
Frame = +1
Query: 103 SPLAKCTARSDPVDLTVTNMSDSDDDVPLVKRAAAAPASAKPTPKSTKPTPKPAAAKPVA 282
+P A+ TA++ P S P +++ + + + + K PKP A K A
Sbjct: 483 TPKARVTAKAAP--------SLPAKQAPRAGGDSSSDSESSSSEEEKKTPPKPPAKKKAA 534
Query: 283 NGRSTPSRKKPEPEPEEEDDEDESEESSSSDSESDDSDSDKP 408
P+P P ++ + S SSSS+ +S + + KP
Sbjct: 535 GAAV------PKPTPVKKAAAESSSSSSSSE-DSSEEEKKKP 569
Score = 30.4 bits (67), Expect = 6.1
Identities = 22/71 (30%), Positives = 30/71 (41%)
Frame = +1
Query: 193 KRAAAAPASAKPTPKSTKPTPKPAAAKPVANGRSTPSRKKPEPEPEEEDDEDESEESSSS 372
K AA A S+ S + K KPV P K P P++ + ESE SSS
Sbjct: 151 KAAAKASESSSSEESSEEEEEKDKKKKPVQKAVK-PQAKAVRPPPKKA-ESSESESDSSS 208
Query: 373 DSESDDSDSDK 405
+ E+ + K
Sbjct: 209 EDEAPQTQKPK 219
>ref|NP_074060.1| nucleolar phosphoprotein p130; nucleolar phosphoprotein 140 [Rattus
norvegicus] gi|1171752|sp|P41777|NP14_RAT Nucleolar
phosphoprotein p130 (Nucleolar 130 kDa protein) (140 kDa
nucleolar phosphoprotein) (Nopp140) (Nucleolar and
coiled-body phosphoprotein 1) gi|205750|gb|AAA41718.1|
Nopp140
Length = 704
Score = 52.8 bits (125), Expect = 1e-06
Identities = 37/102 (36%), Positives = 49/102 (47%), Gaps = 2/102 (1%)
Frame = +1
Query: 109 LAKCTARSDPVDLTVTNMSDSDDDVPLVKRAAAAPASAKPTPKSTKP--TPKPAAAKPVA 282
++K A+ PV + SDS D A A P SA +P S KP TPKP AAK VA
Sbjct: 355 VSKTPAKPAPVKKKAESSSDSSDSDSSEDEAPAKPVSATKSPLS-KPAVTPKPPAAKAVA 413
Query: 283 NGRSTPSRKKPEPEPEEEDDEDESEESSSSDSESDDSDSDKP 408
+ P+ +P+ + D EESSSS+ E+ P
Sbjct: 414 TPKQ-PAGSGQKPQSRKADSSSSEEESSSSEEEATKKSVTTP 454
Score = 38.9 bits (89), Expect = 0.017
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 163 SDSDDDVPLVKRAAAAPASAK-PTPKSTKPTPKPAAAKPVANGRSTPSRKKPEPEPEEED 339
S S+D+ P ++ AA +AK PT TK KP P K +P+ +
Sbjct: 176 SSSEDEAPQTQKPKAAATAAKAPTKAQTKAPAKPG-----------PPAKA---QPKAAN 221
Query: 340 DEDESEESSSSDSESDDSDSDK 405
+ S SSSS S SDDS+ +K
Sbjct: 222 GKAGSSSSSSSSSSSDDSEEEK 243
Score = 34.3 bits (77), Expect = 0.42
Identities = 26/71 (36%), Positives = 35/71 (48%), Gaps = 11/71 (15%)
Frame = +1
Query: 190 VKRAAAAPASA-----------KPTPKSTKPTPKPAAAKPVANGRSTPSRKKPEPEPEEE 336
VK+AAA +S+ K PKS K TPKP A K ANG K E EEE
Sbjct: 514 VKKAAAESSSSSSSSEDSSEEEKKKPKS-KATPKPQAGK--ANGVPASQNGKAGKESEEE 570
Query: 337 DDEDESEESSS 369
+++ E + ++
Sbjct: 571 EEDTEQNKKAA 581
Score = 33.9 bits (76), Expect = 0.55
Identities = 22/71 (30%), Positives = 30/71 (41%)
Frame = +1
Query: 193 KRAAAAPASAKPTPKSTKPTPKPAAAKPVANGRSTPSRKKPEPEPEEEDDEDESEESSSS 372
K AA A S+ S + K KPV P K P P++ + ESE SSS
Sbjct: 120 KAAAKASESSSSEESSEEEEEKDKKKKPVQQKAVKPQAKAVRPPPKKA-ESSESESDSSS 178
Query: 373 DSESDDSDSDK 405
+ E+ + K
Sbjct: 179 EDEAPQTQKPK 189
Score = 30.8 bits (68), Expect = 4.7
Identities = 25/102 (24%), Positives = 44/102 (42%)
Frame = +1
Query: 103 SPLAKCTARSDPVDLTVTNMSDSDDDVPLVKRAAAAPASAKPTPKSTKPTPKPAAAKPVA 282
+P A+ TA++ P S P +++ + + + + K PKP A K A
Sbjct: 453 TPKARVTAKAAP--------SLPAKQAPRAGGDSSSDSESSSSEEEKKTPPKPPAKKKAA 504
Query: 283 NGRSTPSRKKPEPEPEEEDDEDESEESSSSDSESDDSDSDKP 408
P+P P ++ + S SSSS+ +S + + KP
Sbjct: 505 GAAV------PKPTPVKKAAAESSSSSSSSE-DSSEEEKKKP 539
>ref|NP_857691.1| CobT homolog [Yersinia pestis KIM] gi|7467322|pir||T14701 cobT
protein homolog - Yersinia pestis plasmid pMT1
gi|2996337|gb|AAC13217.1| CobT homolog [Yersinia pestis
KIM]
Length = 784
Score = 52.8 bits (125), Expect = 1e-06
Identities = 37/124 (29%), Positives = 55/124 (43%), Gaps = 17/124 (13%)
Frame = +1
Query: 88 WAISISPLAKCTARSDPVDLTVTNMSDSDDDVPLVKRAAAAPASAKPTPKSTKPTPKPAA 267
W + P+A + +D+ V NMS+++D V + A K P+ P K +A
Sbjct: 181 WHLIDKPVA--LLKEHGIDVAVRNMSNTEDCVKVAAAIAQIMQDMKDKPEGKLPELKSSA 238
Query: 268 AKPV----------------ANGRSTPSRKKPEPEPEEEDDEDESEESSSSDSESDDS-D 396
KP ++ S P R K E + +EE ++D SEE S DS+ DS D
Sbjct: 239 KKPSKSKDESEETPESGDDPSHSESAPKRTKGEDDDKEEQEDDASEEEDSGDSDLPDSLD 298
Query: 397 SDKP 408
D P
Sbjct: 299 KDLP 302
