Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002302A_C01 KCC002302A_c01
(966 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A48537 starch branching enzyme isoform RBE3 - rice gi|43605... 150 2e-35
pir||T02041 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) IIa ... 149 7e-35
pir||S65045 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) isof... 144 2e-33
ref|NP_181180.1| 1,4-alpha-glucan branching enzyme (starch branc... 144 2e-33
gb|AAP72267.1| starch branching enzyme IIb [Sorghum bicolor] 144 2e-33
>pir||A48537 starch branching enzyme isoform RBE3 - rice
gi|436052|dbj|BAA03738.1| branching enzyme-3 precursor
[Oryza sativa]
Length = 825
Score = 150 bits (380), Expect = 2e-35
Identities = 85/201 (42%), Positives = 116/201 (57%), Gaps = 2/201 (0%)
Frame = +2
Query: 365 PKSAGSSLTNASGAELALLGEAGAVAGPEDFWSPTVEVPENM--EYVDEYGPISPIPNHD 538
P SAGS + L E GA E + VE + + E E P P D
Sbjct: 84 PVSAGSDDLQLPALDDELSTEVGAEVEIESSGASDVEGVKRVVEELAAEQKPRVVPPTGD 143
Query: 539 GTMCFKWDNTLWSAAEHFKYRWNVFKNIRAAIDQNEGGFEKFSQGYKYYGFNRGECNGQT 718
G F+ D+ L H +YR+++++ +R+ IDQ EGG E FS+GY+ +GFN +
Sbjct: 144 GQKIFQMDSMLNGYKYHLEYRYSLYRRLRSDIDQYEGGLETFSRGYEKFGFN----HSAE 199
Query: 719 GIWYREWAPGAKALALVGDFNNWAPAEGHWAFKNQYGTWELFLPDKPDGTSAIPHRTKVK 898
G+ YREWAPGA + ALVGDFNNW P + KN++G WE+FLP+ DG+S IPH ++VK
Sbjct: 200 GVTYREWAPGAHSAALVGDFNNWNPNADRMS-KNEFGVWEIFLPNNADGSSPIPHGSRVK 258
Query: 899 ARIEGADGSWQDKIPAWIKWS 961
R+E G +D IPAWIK+S
Sbjct: 259 VRMETPSGI-KDSIPAWIKYS 278
>pir||T02041 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) IIa - maize
(fragment) gi|2340108|gb|AAB67316.1| starch branching
enzyme IIa [Zea mays]
Length = 814
Score = 149 bits (376), Expect = 7e-35
Identities = 101/265 (38%), Positives = 140/265 (52%), Gaps = 4/265 (1%)
Frame = +2
Query: 179 RRGALPRSVVTAA-APGEKLSALELLRRENELLRQTLDVANVPVDSVVEPRASSTA--TA 349
R+ A R+V++ A APG+ L ++LL V + + + P A T T+
Sbjct: 9 RKDAFSRTVLSCAGAPGKVLVPGG---GSDDLLSSAEPVVDTQPEELQIPEAELTVEKTS 65
Query: 350 PRPTAPKSAGSSLTNASGAE-LALLGEAGAVAGPEDFWSPTVEVPENMEYVDEYGPISPI 526
PT SA + ++ AE L E V G + V+E + P
Sbjct: 66 SSPTQTTSAVAEASSGVEAEERPELSEVIGVGGTGGTKIDGAGIKAKAPLVEEKPRVIPP 125
Query: 527 PNHDGTMCFKWDNTLWSAAEHFKYRWNVFKNIRAAIDQNEGGFEKFSQGYKYYGFNRGEC 706
P DG ++ D L H YR++ +K +RAAIDQ+EGG + FS+GY+ GF R
Sbjct: 126 PG-DGQRIYEIDPMLEGFRGHLDYRYSEYKRLRAAIDQHEGGLDAFSRGYEKLGFTR--- 181
Query: 707 NGQTGIWYREWAPGAKALALVGDFNNWAPAEGHWAFKNQYGTWELFLPDKPDGTSAIPHR 886
GI YREWAPGA + ALVGDFNNW P A +N+YG WE+FLP+ DG+ AIPH
Sbjct: 182 -SAEGITYREWAPGAYSAALVGDFNNWNPNADAMA-RNEYGVWEIFLPNNADGSPAIPHG 239
Query: 887 TKVKARIEGADGSWQDKIPAWIKWS 961
++VK R++ G +D IPAWIK+S
Sbjct: 240 SRVKIRMDTPSGV-KDSIPAWIKFS 263
>pir||S65045 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) isoform SBE2.1
precursor - Arabidopsis thaliana (fragment)
gi|619939|gb|AAB03099.1| starch branching enzyme class
II
Length = 854
Score = 144 bits (364), Expect = 2e-33
Identities = 78/185 (42%), Positives = 109/185 (58%)
Frame = +2
Query: 407 ELALLGEAGAVAGPEDFWSPTVEVPENMEYVDEYGPISPIPNHDGTMCFKWDNTLWSAAE 586
+ + L +G+++ EDF + V + E G P DG + D L S
Sbjct: 115 QTSALSTSGSISYKEDFAKMSHSVDQ------EVGQRKIPPPGDGKRIYDIDPMLNSHRN 168
Query: 587 HFKYRWNVFKNIRAAIDQNEGGFEKFSQGYKYYGFNRGECNGQTGIWYREWAPGAKALAL 766
H YR+ ++ +R ID+NEGG E FS+GY+ +GF R TGI YREWAPGAKA +L
Sbjct: 169 HLDYRYGQYRKLREEIDKNEGGLEAFSRGYEIFGFTR----SATGITYREWAPGAKAASL 224
Query: 767 VGDFNNWAPAEGHWAFKNQYGTWELFLPDKPDGTSAIPHRTKVKARIEGADGSWQDKIPA 946
+GDFNNW A+ +N +G WE+FLP+ DG+ AIPH ++VK R++ G +D IPA
Sbjct: 225 IGDFNNW-NAKSDVMARNDFGVWEIFLPNNADGSPAIPHGSRVKIRMDTPSGI-KDSIPA 282
Query: 947 WIKWS 961
WIK+S
Sbjct: 283 WIKYS 287
>ref|NP_181180.1| 1,4-alpha-glucan branching enzyme (starch branching enzyme class
II/sbe2-1) [Arabidopsis thaliana]
gi|25286745|pir||B84780 starch branching enzyme II
[imported] - Arabidopsis thaliana
gi|2274862|emb|CAA04134.1| Starch branching enzyme II
[Arabidopsis thaliana] gi|4581160|gb|AAD24644.1| starch
branching enzyme II [Arabidopsis thaliana]
gi|22531146|gb|AAM97077.1| unknown protein [Arabidopsis
thaliana]
Length = 858
Score = 144 bits (364), Expect = 2e-33
Identities = 78/185 (42%), Positives = 109/185 (58%)
Frame = +2
Query: 407 ELALLGEAGAVAGPEDFWSPTVEVPENMEYVDEYGPISPIPNHDGTMCFKWDNTLWSAAE 586
+ + L +G+++ EDF + V + E G P DG + D L S
Sbjct: 119 QTSALSTSGSISYKEDFAKMSHSVDQ------EVGQRKIPPPGDGKRIYDIDPMLNSHRN 172
Query: 587 HFKYRWNVFKNIRAAIDQNEGGFEKFSQGYKYYGFNRGECNGQTGIWYREWAPGAKALAL 766
H YR+ ++ +R ID+NEGG E FS+GY+ +GF R TGI YREWAPGAKA +L
Sbjct: 173 HLDYRYGQYRKLREEIDKNEGGLEAFSRGYEIFGFTR----SATGITYREWAPGAKAASL 228
Query: 767 VGDFNNWAPAEGHWAFKNQYGTWELFLPDKPDGTSAIPHRTKVKARIEGADGSWQDKIPA 946
+GDFNNW A+ +N +G WE+FLP+ DG+ AIPH ++VK R++ G +D IPA
Sbjct: 229 IGDFNNW-NAKSDVMARNDFGVWEIFLPNNADGSPAIPHGSRVKIRMDTPSGI-KDSIPA 286
Query: 947 WIKWS 961
WIK+S
Sbjct: 287 WIKYS 291
>gb|AAP72267.1| starch branching enzyme IIb [Sorghum bicolor]
Length = 803
Score = 144 bits (363), Expect = 2e-33
Identities = 72/145 (49%), Positives = 95/145 (64%)
Frame = +2
Query: 527 PNHDGTMCFKWDNTLWSAAEHFKYRWNVFKNIRAAIDQNEGGFEKFSQGYKYYGFNRGEC 706
P DG F+ D L H +YR+++++ IR+ ID++EGG E FS+ Y+ +GFNR
Sbjct: 118 PPSDGQKIFQIDPMLQGYKYHLEYRYSLYRRIRSDIDEHEGGSEAFSRSYEKFGFNR--- 174
Query: 707 NGQTGIWYREWAPGAKALALVGDFNNWAPAEGHWAFKNQYGTWELFLPDKPDGTSAIPHR 886
GI YREWAPGA + ALVGDFNNW P KN++G WE+FLP+ DGTS IPH
Sbjct: 175 -SAEGITYREWAPGALSAALVGDFNNWDP-NADLMSKNEFGVWEIFLPNNADGTSPIPHG 232
Query: 887 TKVKARIEGADGSWQDKIPAWIKWS 961
T+VK R++ G +D IPAWIK+S
Sbjct: 233 TRVKVRMDTPSGI-KDSIPAWIKYS 256
