Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002298A_C01 KCC002298A_c01
(285 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S39206 proline-rich protein V-beta 1 precursor - rat gi|433... 37 0.059
emb|CAE04778.1| OSJNBb0115I21.6 [Oryza sativa (japonica cultivar... 37 0.059
pir||T05717 probable extensin - barley (fragment) gi|2950243|emb... 37 0.078
ref|NP_649060.1| CG14073-PB [Drosophila melanogaster] gi|2309317... 37 0.10
pir||T03236 extensin precursor - common tobacco gi|505144|dbj|BA... 37 0.10
>pir||S39206 proline-rich protein V-beta 1 precursor - rat
gi|433617|emb|CAA52300.1| VCS-beta1 [Rattus rattus]
gi|471332|emb|CAA54831.1| PR-Vbeta1 [Rattus norvegicus]
Length = 148
Score = 37.4 bits (85), Expect = 0.059
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 163 YMPRVRHPPKHRSPRTLRKRCTLPPSNTHTTPTPRTPPTRTPLSV 29
Y P + HPP HR PP+N T P P PP+R P +V
Sbjct: 91 YPPYIPHPPHHR-----------PPANPPTRPPPSNPPSRPPPTV 124
>emb|CAE04778.1| OSJNBb0115I21.6 [Oryza sativa (japonica cultivar-group)]
Length = 897
Score = 37.4 bits (85), Expect = 0.059
Identities = 20/44 (45%), Positives = 21/44 (47%)
Frame = -3
Query: 178 LGHKPYMPRVRHPPKHRSPRTLRKRCTLPPSNTHTTPTPRTPPT 47
L PY R RHP SP LR+ PPS PTP TP T
Sbjct: 40 LNDDPYRAR-RHPSSSSSPPPLRRLTPPPPSTPRPPPTPATPST 82
>pir||T05717 probable extensin - barley (fragment) gi|2950243|emb|CAB10894.1|
extensin [Hordeum vulgare]
Length = 330
Score = 37.0 bits (84), Expect = 0.078
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 184 TPLGHKPYMPRVRHPPKHRSPRTLRKRCTLPPSNTHTTPTPR-TPPTRTP 38
TP HKP P PP H+ P PP++ TTPTP PPT TP
Sbjct: 253 TPPAHKPATPT---PPAHKPPTPT------PPAHKPTTPTPAYKPPTPTP 293
Score = 32.3 bits (72), Expect = 1.9
Identities = 20/51 (39%), Positives = 24/51 (46%), Gaps = 2/51 (3%)
Frame = -3
Query: 184 TPLGHKPYMPRVRHPPKHRSPRTLRKRCTLPPSNTHTTPTP--RTPPTRTP 38
TP +KP P PP H+ P PP++ TPTP PPT TP
Sbjct: 233 TPPAYKPPTPT---PPAHKPPTPT------PPAHKPATPTPPAHKPPTPTP 274
>ref|NP_649060.1| CG14073-PB [Drosophila melanogaster] gi|23093170|gb|AAN11668.1|
CG14073-PB [Drosophila melanogaster]
Length = 2133
Score = 36.6 bits (83), Expect = 0.10
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = -2
Query: 278 FQGNHQPHLYISSHCQHPLSGVIFYCRRHALHATWS*AVHAPGAPSAKTPVSEDPSEEVH 99
+Q +HQPH + H HP + + H H H P P + P +++H
Sbjct: 9 YQTHHQPHPSMQHHPTHPHHQQPHHQQPH--HPQQPIHQHHPPPPPPQPQQQHQPPQQIH 66
Query: 98 PSSQQHTHDTYSPH 57
QQH H H
Sbjct: 67 QQQQQHPHHYQQLH 80
>pir||T03236 extensin precursor - common tobacco gi|505144|dbj|BAA03043.1|
extensin precursor [Nicotiana tabacum]
Length = 280
Score = 36.6 bits (83), Expect = 0.10
Identities = 18/48 (37%), Positives = 27/48 (55%)
Frame = -3
Query: 181 PLGHKPYMPRVRHPPKHRSPRTLRKRCTLPPSNTHTTPTPRTPPTRTP 38
P KPY P HPP ++SP +K +LP + + +P P TP ++P
Sbjct: 88 PPPKKPYYPP--HPPVYKSPPPPKKPYSLPHTPVYKSPPPPTPVYKSP 133
