Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002297A_C01 KCC002297A_c01
(549 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_787081.1| hypothetical protein MGC33846 [Homo sapiens] gi... 38 0.079
gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus] 38 0.10
emb|CAD19511.1| UL36 protein [Pseudorabies virus] 37 0.23
emb|CAB38633.1| CABP1 protein [Dictyostelium discoideum] 36 0.39
sp|P19198|CAP1_DICDI cAMP binding protein CABP1A/CABP1B (CABP1 p... 36 0.39
>ref|NP_787081.1| hypothetical protein MGC33846 [Homo sapiens]
gi|24659683|gb|AAH39262.1| Hypothetical protein MGC33846
[Homo sapiens]
Length = 336
Score = 38.1 bits (87), Expect = 0.079
Identities = 23/58 (39%), Positives = 32/58 (54%), Gaps = 2/58 (3%)
Frame = -1
Query: 348 SGRHSASPP--PGAA*SDCP*VEPRGAQKWPHLTWPSSWTAAPRRSSQRSAAAAAAQS 181
SG A+PP P + +D P P A P + P+ AAPRR + ++AAAA+ QS
Sbjct: 105 SGLMGAAPPGPPSPSAADTPAKRPLAAPSAPTVAAPAHGKAAPRREASQAAAAASLQS 162
>gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus]
Length = 297
Score = 37.7 bits (86), Expect = 0.10
Identities = 41/136 (30%), Positives = 52/136 (38%), Gaps = 16/136 (11%)
Frame = +1
Query: 142 TSSPWASSP---PWDTALRCCSSGGSL*GPAWRSRPR-------------ARPRQVRPLL 273
TS+ A +P P T R CS + P W +R AR RP
Sbjct: 157 TSTCGACAPARAPGSTWTRACSRACATSTPCWSTRRATLARGAAGATTGGARRASTRPCA 216
Query: 274 SSARLHSRAITSRSPRRR*C*VSSRHRRTSPARTTLHDLNAK*THALTRFSCWLCSWRSR 453
+++R S A + +P R S+R RR S A T A R C R R
Sbjct: 217 TASRSTSSAARATAPSSR-TPSSARTRRPSSA-----------TGAGARSRCT----RGR 260
Query: 454 WSSSWESCCFSP*TPS 501
W+ SW SCC PS
Sbjct: 261 WTRSWPSCCRCASPPS 276
>emb|CAD19511.1| UL36 protein [Pseudorabies virus]
Length = 3084
Score = 36.6 bits (83), Expect = 0.23
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Frame = -1
Query: 456 PPRAPAAQ-PAAE--PCQSVSLFCVQVV*CRPCWRGPSVSGRHSASPPPGAA-------- 310
PP+ P+AQ P A+ P Q + P + P+ + +A PPP AA
Sbjct: 2304 PPQPPSAQAPPAQKPPAQPATAAATTAPKATPQTQPPTRAQTQTAPPPPSAATAAAQVPP 2363
Query: 309 --*SDCP*VEPRGAQKWPHL-TWPSSWTAAPRRSSQRSAAAAAAQSGVPWRAAGPGRARC 139
S P +PRGA P PS+ T PR ++ + +AQ+ +P A P A
Sbjct: 2364 QPPSSQPAAKPRGAPPAPPAPPPPSAQTTLPRPAAPPAPPPPSAQTTLPRPAPPPPSAPA 2423
Query: 138 KT 133
T
Sbjct: 2424 AT 2425
>emb|CAB38633.1| CABP1 protein [Dictyostelium discoideum]
Length = 296
Score = 35.8 bits (81), Expect = 0.39
Identities = 24/75 (32%), Positives = 29/75 (38%)
Frame = -1
Query: 375 RPCWRGPSVSGRHSASPPPGAA*SDCP*VEPRGAQKWPHLTWPSSWTAAPRRSSQRSAAA 196
RP P G + PPPGA P +P G P P+ AP+ + Q A
Sbjct: 21 RPPTGAPQQPGGYPTPPPPGAPGGYPPQQQPAGQYGAPPQQQPAGQYGAPQPAGQYGAPQ 80
Query: 195 AAAQSGVPWRAAGPG 151
A Q G P A G
Sbjct: 81 PAGQYGAPQPAGQYG 95
>sp|P19198|CAP1_DICDI cAMP binding protein CABP1A/CABP1B (CABP1 protein)
gi|102213|pir||S11484 CABP1 protein - slime mold
(Dictyostelium discoideum) gi|7220|emb|CAA36913.1| CABP1
protein [Dictyostelium discoideum]
gi|167678|gb|AAA33173.1| cAMP binding protein
Length = 333
Score = 35.8 bits (81), Expect = 0.39
Identities = 24/75 (32%), Positives = 29/75 (38%)
Frame = -1
Query: 375 RPCWRGPSVSGRHSASPPPGAA*SDCP*VEPRGAQKWPHLTWPSSWTAAPRRSSQRSAAA 196
RP P G + PPPGA P +P G P P+ AP+ + Q A
Sbjct: 58 RPPTGAPQQPGGYPTPPPPGAPGGYPPQQQPAGQYGAPPQQQPAGQYGAPQPAGQYGAPQ 117
Query: 195 AAAQSGVPWRAAGPG 151
A Q G P A G
Sbjct: 118 PAGQYGAPQPAGQYG 132
