KCC002295A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002295A_C01 KCC002295A_c01
cgtggatgaggcctcgttcaaggccgctcaggttgagcagctcggctccttcacgccgga
gcagctgcggctatggaaaaAGCTGAACGCGCAAGTGCACCAGGACGTGGAGGTCGAGAA
GAAGGAGATCAACGTGACGGTAACCACCGGCGAGCCGGTGCCGGGCTTCCTGAAATTGGA
GAAGGCCCGAGTGGTGCTGAAAGCATCATACCGGGCCATTCGCTTGCGGGAGGGCTCTTC
GTCGCGCGAGCGGGACCTCACGTTGATACAGGTCACTGCGCAGGTGGCGCCCACCGTGGA
AGACAACCAGCTGCGCCTCGTGGAGATGTGCAACAATCACCCCATGTTTCAGTTCTTGTT
CGATGAGAGCGGCAAGCTGCTGGCAGCGAACAAGCGGGCCATGTGCAACATGCGAGAACA
CCTCGGGTCGTGCGAAAACTACAACCTCCAAAACTACCTCGCCATCGGGGAGTGTGACGG
CAGCCTCGGGCCGGATGAGATGTATAAGGAGGCCATGGAGGCGATATTCGTGCTCGAGCA
GCCGTGCCACCGCTTCCCGCAGCTTAGATGGAGCAAGCGGCATCCGGGAAAGTACCGCTG
GGTGCTGTACGAGATGTGGCCGTCCATCGACCCGGTCAGCCAGCAGAAGGCGGTGCTGGT
GTGTGAGCAGAACA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002295A_C01 KCC002295A_c01
         (674 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177...    49  7e-05
gb|AAF61923.1| SanE [Streptomyces ansochromogenes]                     46  4e-04
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (...    45  8e-04
gb|AAP79264.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    45  8e-04
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|...    45  0.001

>ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177813|gb|EAA06779.2|
           ENSANGP00000001657 [Anopheles gambiae str. PEST]
          Length = 283

 Score = 48.9 bits (115), Expect = 7e-05
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
 Frame = +3

Query: 303 TTSCA-----SWRCAT-ITPCFSSCSMRAASCWQRTSGPCATCENTSGRAKTTTSKTTSP 464
           TTSC+     S  CA+  + C SSCS  A+SC   T+   +   + S    +++S TTS 
Sbjct: 169 TTSCSCCASSSSSCASSCSSCASSCSSCASSCSSGTTSSSSCASSCSSSTSSSSSGTTSC 228

Query: 465 SGSVTAASGRMRCIRRPWRRYSCSSSRATASRSLDGASGIRESTAGCCTRCGRPSTRSAS 644
           S   T++S    C        SCSSS +++      +S    S + C + C   ++ S+S
Sbjct: 229 SSGTTSSS----CCTS-----SCSSSTSSSCSGTTASSSCASSCSSCASSCSSSTSSSSS 279

 Score = 45.4 bits (106), Expect = 8e-04
 Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
 Frame = +3

Query: 303 TTSCASW--RCATITPCFSSCSMRAASCWQRTSGPCATCENTSGRAKTTTSKTTSPSGSV 476
           TTSC+S    C++ T   SSCS   +SC   T+   ++  +++    + +S T+S S S 
Sbjct: 38  TTSCSSCTSSCSSGT---SSCSSATSSCSSGTTSCTSSTSSSNSCTSSCSSGTSSRSSST 94

Query: 477 T-AASGRMRCIRRPWRRYSCSSSRATASRSL-DGASGIRESTAGC--CTRCGRPSTRSAS 644
           T ++SG   C        SC+SS ++++ S   G S  R  T+ C  CT      T S S
Sbjct: 95  TSSSSGTSSCSSGTTSSSSCASSCSSSTSSCSSGTSSCRSGTSSCSSCTTSCSCCTSSCS 154

Query: 645 RRRCWCVS 668
                C S
Sbjct: 155 SCASSCSS 162

 Score = 42.4 bits (98), Expect = 0.006
 Identities = 29/118 (24%), Positives = 52/118 (43%), Gaps = 5/118 (4%)
 Frame = +3

Query: 306 TSCASWRCATITPCFSSCSMRAASCWQRTS---GPCATCENTSGRAKTTTSKTTSPSGSV 476
           +SC+S   ++ T   S C+  ++SC    S     C++C ++     T++S   S   S 
Sbjct: 158 SSCSSCASSSSTTSCSCCASSSSSCASSCSSCASSCSSCASSCSSGTTSSSSCASSCSSS 217

Query: 477 T--AASGRMRCIRRPWRRYSCSSSRATASRSLDGASGIRESTAGCCTRCGRPSTRSAS 644
           T  ++SG   C         C+SS ++++ S    +    S A  C+ C    + S S
Sbjct: 218 TSSSSSGTTSCSSGTTSSSCCTSSCSSSTSSSCSGTTASSSCASSCSSCASSCSSSTS 275

 Score = 41.2 bits (95), Expect = 0.014
 Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
 Frame = +3

Query: 303 TTSCASWRCATITPCFSSCSMRAASCWQRTSGPCATCENTSGRAKTTTSKTTSPSGSVTA 482
           ++SCAS  C++ T   SSCS   +SC   TS  C++C  +     ++ S   S   S  +
Sbjct: 111 SSSCAS-SCSSST---SSCSSGTSSCRSGTSS-CSSCTTSCSCCTSSCSSCASSCSSCAS 165

Query: 483 ASGRMRC----IRRPWRRYSCSSSRATASRSLDGASGIRESTAGCCTRCGRPSTRSASRR 650
           +S    C            SCSS  ++ S      S    S++ C + C   ST S+S  
Sbjct: 166 SSSTTSCSCCASSSSSCASSCSSCASSCSSCASSCSSGTTSSSSCASSCS-SSTSSSSSG 224

Query: 651 RCWCVSRT 674
              C S T
Sbjct: 225 TTSCSSGT 232

 Score = 40.8 bits (94), Expect = 0.019
 Identities = 30/116 (25%), Positives = 52/116 (43%), Gaps = 2/116 (1%)
 Frame = +3

Query: 303 TTSCASWR--CATITPCFSSCSMRAASCWQRTSGPCATCENTSGRAKTTTSKTTSPSGSV 476
           T+SC+S    C+  T   SSC+   +SC   +S    +C  +S  +  ++  + + S S 
Sbjct: 136 TSSCSSCTTSCSCCTSSCSSCASSCSSCASSSSTTSCSCCASSSSSCASSCSSCASSCSS 195

Query: 477 TAASGRMRCIRRPWRRYSCSSSRATASRSLDGASGIRESTAGCCTRCGRPSTRSAS 644
            A+S             SCSSS +++S      S    S++ C + C   ++ S S
Sbjct: 196 CASSCSSGTTSSSSCASSCSSSTSSSSSGTTSCSSGTTSSSCCTSSCSSSTSSSCS 251

 Score = 39.3 bits (90), Expect = 0.055
 Identities = 34/124 (27%), Positives = 56/124 (44%), Gaps = 6/124 (4%)
 Frame = +3

Query: 303 TTSCASWRCATITPCFSSCSMRAASCWQRTSGPCATCENTSGRAKTTTSKTTSPSGSVTA 482
           + S +S    T + C +SCS   +SC   TS   +   + S    + +S T+S S + ++
Sbjct: 2   SASSSSSGATTSSCCTTSCSSGTSSCSSSTSSGSSGTTSCSSCTSSCSSGTSSCSSATSS 61

Query: 483 -ASGRMRCIRRPWRRYSCSS--SRATASRS---LDGASGIRESTAGCCTRCGRPSTRSAS 644
            +SG   C        SC+S  S  T+SRS      +SG    ++G  +     S+ S+S
Sbjct: 62  CSSGTTSCTSSTSSSNSCTSSCSSGTSSRSSSTTSSSSGTSSCSSGTTSSSSCASSCSSS 121

Query: 645 RRRC 656
              C
Sbjct: 122 TSSC 125

>gb|AAF61923.1| SanE [Streptomyces ansochromogenes]
          Length = 189

 Score = 46.2 bits (108), Expect = 4e-04
 Identities = 62/190 (32%), Positives = 75/190 (38%), Gaps = 13/190 (6%)
 Frame = -1

Query: 647 SAG*PGRWTATSRTAPSGTFPDAACSI*AAGSGGTAARARIS--PPWPP-YTSHPARGCR 477
           S G PGRW         G+            S G+AARAR    PPWP  +TS  +R  R
Sbjct: 19  SRGPPGRWRRPRPRRCGGS-----------SSAGSAARARRRWPPPWPGRWTSGTSRWTR 67

Query: 476 HTPRWRGSFGGCSFRTT----RGVLACCTWPACSLPAACRSHRTRTETWGDCCTS-PRGA 312
            T    G  G  S RTT    RG       P+ +  +A  S    T + G  C + P  A
Sbjct: 68  STTVPAGPTGRSS-RTTWSAPRGHRRGSATPSTTGSSATCSASAPTRSSGSTCPAGPSCA 126

Query: 311 AGCLPRWAPPAQ*PVST*GPARATKSPPASEWPGMMLSAP-----LGPSPISGSPAPARR 147
           A C  RW+          GP RA     A+  PG    A       GP P S  P   RR
Sbjct: 127 ACCGARWS----------GPPRAGNCGTATGRPGGRCCATRATRCAGPGP-STPPGGPRR 175

Query: 146 WLPSR*SPSS 117
            L S  +P+S
Sbjct: 176 PLSSACTPAS 185

 Score = 42.4 bits (98), Expect = 0.006
 Identities = 52/179 (29%), Positives = 65/179 (36%), Gaps = 20/179 (11%)
 Frame = +3

Query: 177 WRRPEWC*KHHTGPFACGRALRRASGTSR*YRSLRRWRPPWK---TTSCASWRCATITPC 347
           WRRP         P  CG +    S      R+ RRW PPW    T+  + W  +T  P 
Sbjct: 26  WRRPR--------PRRCGGSSSAGSAA----RARRRWPPPWPGRWTSGTSRWTRSTTVPA 73

Query: 348 -----------FSSCSMRAASCWQRTSGPCATCENTSGRAKTTTSKTTSPSGSVTAASGR 494
                       +    R  S    T+G  ATC   S  A T +S +T P+G   AA   
Sbjct: 74  GPTGRSSRTTWSAPRGHRRGSATPSTTGSSATC---SASAPTRSSGSTCPAGPSCAA--- 127

Query: 495 MRCIRRPWRRYSCSSSRATASRSLDGASGIRESTAGCC----TRCG--RPSTRSASRRR 653
             C    W     + +  TA+    G  G R     CC    TRC    PST     RR
Sbjct: 128 --CCGARWSGPPRAGNCGTAT----GRPGGR-----CCATRATRCAGPGPSTPPGGPRR 175

>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
           glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
           vegetative cell wall protein gp1 [Chlamydomonas
           reinhardtii]
          Length = 555

 Score = 45.4 bits (106), Expect = 8e-04
 Identities = 29/75 (38%), Positives = 34/75 (44%)
 Frame = -1

Query: 326 SPRGAAGCLPRWAPPAQ*PVST*GPARATKSPPASEWPGMMLSAPLGPSPISGSPAPARR 147
           SP   +   P  APP+  P S   P+ A  SPP+   P     +P  PSP   SPAP   
Sbjct: 47  SPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSPAPPSPAPPSP 106

Query: 146 WLPSR*SPSSRPPRP 102
             PS   PS  PP P
Sbjct: 107 APPSPAPPSPAPPSP 121

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 39/112 (34%), Positives = 45/112 (39%), Gaps = 5/112 (4%)
 Frame = -1

Query: 323 PRGAAGCLPRWAPPAQ*PVST*GPARATKSP-PASEWPGMML----SAPLGPSPISGSPA 159
           P G   C P  APP+  P S   P+ A  SP P S  P         +P  PSP   SPA
Sbjct: 33  PGGIFNCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPA 92

Query: 158 PARRWLPSR*SPSSRPPRPGALARSAFSIAAAAPA*RSRAAQPERP*TRPHP 3
           P     PS   PS  PP P   + +  S  + AP   S  A P      P P
Sbjct: 93  PPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAP 144

 Score = 40.8 bits (94), Expect = 0.019
 Identities = 29/75 (38%), Positives = 34/75 (44%)
 Frame = -1

Query: 326 SPRGAAGCLPRWAPPAQ*PVST*GPARATKSPPASEWPGMMLSAPLGPSPISGSPAPARR 147
           SP   +   P  APP+  P S   P+ A  SPP+   P     AP  PSP    P+PA  
Sbjct: 90  SPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSP----PSPAPP 145

Query: 146 WLPSR*SPSSRPPRP 102
             PS   PS  PP P
Sbjct: 146 LPPSPAPPSPSPPVP 160

 Score = 39.7 bits (91), Expect = 0.042
 Identities = 31/77 (40%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = -1

Query: 326 SPRGAAGCLPRWAPPAQ*PVST*GPARATKSPPASEWPGMMLSAP-LGPSPISGSPAPAR 150
           SP   +   P  APP+  P S   PA  + SPPA   P     AP L PSP   SP+P  
Sbjct: 100 SPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPV 159

Query: 149 RWLPS-R*SPSSRPPRP 102
              PS    PS  PP P
Sbjct: 160 PPSPSPPVPPSPAPPSP 176

 Score = 38.9 bits (89), Expect = 0.071
 Identities = 35/102 (34%), Positives = 43/102 (41%), Gaps = 3/102 (2%)
 Frame = -1

Query: 299 PRWAPPAQ*PVST*GPARA---TKSPPASEWPGMMLSAPLGPSPISGSPAPARRWLPSR* 129
           P  APP+  P S   PA     +  PP    P    + P+ PSP S  P+PA    P+  
Sbjct: 247 PSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPP 306

Query: 128 SPSSRPPRPGALARSAFSIAAAAPA*RSRAAQPERP*TRPHP 3
           SPS   P P + A    S A  +PA  S    P  P   P P
Sbjct: 307 SPSPPSPVPPSPAPVPPSPAPPSPA-PSPPPSPAPPTPSPSP 347

 Score = 37.7 bits (86), Expect = 0.16
 Identities = 24/63 (38%), Positives = 30/63 (47%)
 Frame = -1

Query: 290 APPAQ*PVST*GPARATKSPPASEWPGMMLSAPLGPSPISGSPAPARRWLPSR*SPSSRP 111
           +PP+  P S   PA  + SPPA         +P+ PSP   SPAP     P+   P S P
Sbjct: 219 SPPSPAPPSPPSPAPPSPSPPAP-------PSPVPPSPAPPSPAPPSPKPPAPPPPPSPP 271

Query: 110 PRP 102
           P P
Sbjct: 272 PPP 274

 Score = 36.2 bits (82), Expect = 0.46
 Identities = 60/222 (27%), Positives = 74/222 (33%), Gaps = 2/222 (0%)
 Frame = -1

Query: 662 TPAPPSAG*PGRWTATSRTAPSGTFPDAACSI*AAGSGGTAARARISPPWPPYTSHPARG 483
           +PAPPS   P      S   PS   P  A    A  S  + A    SPP PP  S P+  
Sbjct: 85  SPAPPSPAPPSP-APPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPS-- 141

Query: 482 CRHTPRWRGSFGGCSFRTTRGVLACCTWPACSLPAACRSHRTRTETWGDCCTSPRGAAGC 303
                                       PA  LP +                 P  +   
Sbjct: 142 ----------------------------PAPPLPPSPAPPSPSPPV------PPSPSPPV 167

Query: 302 LPRWAPPAQ*PVST*GPARATKSPPASEWPGMMLSAPLGPS-PISGSPAPARRWLPSR*S 126
            P  APP+  P S   P   + +PP+   P     AP  P+ P+  SPAP     P+  S
Sbjct: 168 PPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPS 227

Query: 125 -PSSRPPRPGALARSAFSIAAAAPA*RSRAAQPERP*TRPHP 3
            PS  PP P   A    S    +PA  S A    +P   P P
Sbjct: 228 PPSPAPPSPSPPAPP--SPVPPSPAPPSPAPPSPKPPAPPPP 267

 Score = 33.9 bits (76), Expect = 2.3
 Identities = 32/109 (29%), Positives = 42/109 (38%)
 Frame = -1

Query: 329 TSPRGAAGCLPRWAPPAQ*PVST*GPARATKSPPASEWPGMMLSAPLGPSPISGSPAPAR 150
           T P  +    P  APP+  P     PA  + +PP          +P  PSP    P+PA 
Sbjct: 177 TPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVP-------PSPAPPSP----PSPAP 225

Query: 149 RWLPSR*SPSSRPPRPGALARSAFSIAAAAPA*RSRAAQPERP*TRPHP 3
              PS   PS  PP P +    + +  + AP      A P  P   P P
Sbjct: 226 PSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPP 274

 Score = 32.0 bits (71), Expect = 8.7
 Identities = 30/78 (38%), Positives = 36/78 (45%), Gaps = 1/78 (1%)
 Frame = -1

Query: 323 PRGAAGCLPRWAPPAQ*PVST*GPARATKSPPASEWPGMMLSAPLGPSPISGSPAPARRW 144
           P   A   P  APP+  P     PA  T SP  S  P    S    PSP S SP+P+   
Sbjct: 315 PPSPAPVPPSPAPPSPAPSPPPSPAPPTPSPSPSPSP----SPSPSPSP-SPSPSPSPSP 369

Query: 143 LPSR*SPSSRP-PRPGAL 93
           +P   SPS +P P P A+
Sbjct: 370 IP---SPSPKPSPSPVAV 384

>gb|AAP79264.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [uncultured bacterium]
          Length = 157

 Score = 45.4 bits (106), Expect = 8e-04
 Identities = 40/143 (27%), Positives = 47/143 (31%)
 Frame = -1

Query: 536 RARISPPWPPYTSHPARGCRHTPRWRGSFGGCSFRTTRGVLACCTWPACSLPAACRSHRT 357
           R    PPW   TS  +R CR T     S    S RT      C  WP  +          
Sbjct: 32  RVTARPPWASSTSCASRSCRKTAAAATS----SIRTGDRCPVCLPWPPAASTCGTCPPWW 87

Query: 356 RTETWGDCCTSPRGAAGCLPRWAPPAQ*PVST*GPARATKSPPASEWPGMMLSAPLGPSP 177
           R+     CC+S   A    P   PPA               PP + WP    S P  P+ 
Sbjct: 88  RSSVTTRCCSSVV-APTATPGVRPPA---------------PPPTVWPWKPASRPATPAV 131

Query: 176 ISGSPAPARRWLPSR*SPSSRPP 108
            S        W P   +PS R P
Sbjct: 132 RSRGNRATSSWKPPSTAPSWRSP 154

>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
           blr0521 [Bradyrhizobium japonicum USDA 110]
          Length = 745

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 66/224 (29%), Positives = 80/224 (35%), Gaps = 14/224 (6%)
 Frame = -1

Query: 659 PAPPSAG*PGRWTATSRTAPSGTFPDAACSI*AAGSGGTAARARISPPWPPYTSHPARGC 480
           P PP AG   R T      P+   P  A      GS   AA    +P  P  T+ PA   
Sbjct: 178 PPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPTPT-PAPTATPAPTA 236

Query: 479 RHTPRWRGSFGGCSFRTTRGV----LACCTWPACSLPAA--CRSHRTRTETWGDCCTSPR 318
              P   GS  G       G     +   + PA   P A       T T   G   T P 
Sbjct: 237 TPAP---GSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATPPS 293

Query: 317 GAAGCLPRWAPPAQ*PVST*GPAR--ATKSPP----ASEWPGMMLSAPLGPSPISGSPA- 159
           G  G     AP A  P  T  PA   A   PP    A   PG     P   +P +G+PA 
Sbjct: 294 GRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTPGPQGGTPPAGAPAAGTPAA 353

Query: 158 -PARRWLPSR*SPSSRPPRPGALARSAFSIAAAAPA*RSRAAQP 30
            P    LP+R +  +    P  +  SA   AA  P  R++ A P
Sbjct: 354 PPQAGGLPARPAAPAGAAAPSTVPGSA---AATPPPNRAQFAPP 394

 Score = 39.7 bits (91), Expect = 0.042
 Identities = 62/225 (27%), Positives = 79/225 (34%), Gaps = 20/225 (8%)
 Frame = -1

Query: 668 AHTPAPPSAG*PGRWTATSRTAPSGTFPDAACSI*AAGSGGTAARARISPPWPPYT-SHP 492
           A TPAP     P    A + T   G+ P A      AG  G A    + P  PP   S P
Sbjct: 217 AATPAPTPTPAPTATPAPTATPAPGSTPGAP----PAGRPG-APPPGVRPGSPPAAGSPP 271

Query: 491 ARGCRHTPRWRGSFGGCSFRTTRGVLACCTWPACSLPAACRSHRTRTETWGDCCTSPRGA 312
           A G    P    + GG +   + G     + PA   P A     T T   G   T P G 
Sbjct: 272 APGATPAPTTTPAPGGTATPPS-GRPGPASTPA---PGAATPAPTATPAPGGALTPPPGR 327

Query: 311 AGCLPRWAPPAQ*PVST*GPARATKSPPASEWPGMMLSAPLG---PSPISGSPA------ 159
            G  P   P    P +    A    +PP +       +AP G   PS + GS A      
Sbjct: 328 PGAGPTPGPQGGTPPAGAPAAGTPAAPPQAGGLPARPAAPAGAAAPSTVPGSAAATPPPN 387

Query: 158 ----------PARRWLPSR*SPSSRPPRPGALARSAFSIAAAAPA 54
                     PA +  P+  +P   PPRP     +  +I A   A
Sbjct: 388 RAQFAPPTVTPAFQAAPTVVAPLPPPPRPPQRDLTPLAIGAGVVA 432

 Score = 37.0 bits (84), Expect = 0.27
 Identities = 35/114 (30%), Positives = 43/114 (37%), Gaps = 5/114 (4%)
 Frame = -1

Query: 329 TSPRGAAGCLPRWAPPAQ*PVST*GPARATKSPPASEWPGMMLSAPLGPSPISGSPAPAR 150
           T P G     P+  P A  P +   PAR    PPA+  P      P  P P +  P PA 
Sbjct: 42  TGPDGKPKQPPKGPPGAAPPAA---PARPAAPPPAAAPP----HPPAAPPPAAAPPRPAA 94

Query: 149 RWLP-----SR*SPSSRPPRPGALARSAFSIAAAAPA*RSRAAQPERP*TRPHP 3
              P     +R +P   PP P A  + +   AAA          P  P  RP P
Sbjct: 95  PPPPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAARPAP 148

 Score = 34.7 bits (78), Expect = 1.3
 Identities = 40/136 (29%), Positives = 44/136 (31%), Gaps = 4/136 (2%)
 Frame = -1

Query: 398 PACSLPAACRSHRTRTETWGDCCTSPRGAAGCLPRWAPPAQ*PVST*GP----ARATKSP 231
           PA   PAA   H             PR AA   P   PPA  P     P    A    SP
Sbjct: 67  PAAPPPAAAPPHPPAAPP--PAAAPPRPAAPPPPP-PPPAARPAPPPPPPPPAAPKQPSP 123

Query: 230 PASEWPGMMLSAPLGPSPISGSPAPARRWLPSR*SPSSRPPRPGALARSAFSIAAAAPA* 51
           P +  P      P  P+P +  PAP     P   +P   PP P           AA P  
Sbjct: 124 PPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPPPPPP--------PAARPTP 175

Query: 50  RSRAAQPERP*TRPHP 3
                 P  P  RP P
Sbjct: 176 TPPPPPPAGPAARPTP 191

 Score = 34.3 bits (77), Expect = 1.8
 Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 16/117 (13%)
 Frame = -1

Query: 323 PRGAAGCLPRWAP--PAQ*PVST*GPARATKSPPASEWPGMMLSAPLGPSPIS------- 171
           P+G  G  P  AP  PA  P +   P      PPA+  P      P  P P +       
Sbjct: 52  PKGPPGAAPPAAPARPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPP 111

Query: 170 -------GSPAPARRWLPSR*SPSSRPPRPGALARSAFSIAAAAPA*RSRAAQPERP 21
                    P+P     P + +P+  PP P A AR A +  A  PA   + A P  P
Sbjct: 112 PPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPA-ARPAPTPPAPPPAAAPQHAPPPPP 167

 Score = 33.1 bits (74), Expect = 3.9
 Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
 Frame = -1

Query: 287 PPAQ*PVST*GP-------ARATKSPPASEWPGMMLSAPLGPSPISGSPAPARRWLPSR* 129
           PPA  P  T  P       AR T +P A+  P  +   P  P+   GSPAPA    P+  
Sbjct: 168 PPAARPTPTPPPPPPAGPAARPTPAPTATPTP--VAPPPAAPTARPGSPAPAATPAPTPT 225

Query: 128 SPSSRPPRPGALARSAFSIAAAAPA*RSRAAQP 30
              +  P P A      S   A PA R  A  P
Sbjct: 226 PAPTATPAPTATPAPG-STPGAPPAGRPGAPPP 257



EST assemble image


clone accession position
1 HCL073f07_r AV643659 1 477
2 HCL014f06_r AV640346 113 543
3 HCL078a11_r AV643898 124 674




Chlamydomonas reinhardtii
Kazusa DNA Research Institute