KCC002287A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002287A_C01 KCC002287A_c01
CTGCGACTGCCTACGACTGCCTACGACTACGACTGCCCCCTTTTGAGATACGCATGAAGT
AGCGCCGTTAGATTCATACTTTCTCCAAGTCAGGTCACCGGTCTAGCCCTCAGTACACGC
ACTATCATACGTGTTCGTTTGCATTGGAGAAAGCTTATCAGGTCGTGCTACCCGGGGCGA
CCTTGCCCCAATTGCCCCCGGCCATGTCACTGCCTTCGGGCGTTGCCGAGCATGGCGAAT
GACCTAGAGCGGGTTCGTATAGACATTTCAAGGTACGAGGATCGGTGCGCCAAGCTTGAG
AATGTGCTACTGAGCCCAGAACTGAGGCCGGAGCTGCGAGAGAAGCTGGAGACCCAGCTG
AACCTGCTGCTGGGAAATTTGGTGGAGTTTCGGAAGAAGGAGAACCTGAAGGAGGCGCAG
GAGTTGCAGGACCGGAGCGCGGCGGCGGCGGCGGCAGGCCCCGGCCCAGCGAGCCTGGGA
GCTGGCGACGCGGCGGCTGGGCTGGGCTCACACAGCGCGGCAGCTGCTGCCGCGGTGGCT
TGCCCAGGCCCGGAGACGGTGGCAGCCCCAGGTTTGGGGACGGCGGCGGCCCCAGGCTCG
GGGACGGCGGCGATTTCCGCCCCTTTCTCGTCTGCAGATGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002287A_C01 KCC002287A_c01
         (642 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_741367.1| prion-like Q/N-rich domain protein PQN-75, Prio...    70  2e-11
ref|NP_741366.1| prion-like Q/N-rich domain protein PQN-75, Prio...    70  2e-11
ref|NP_741365.1| prion-like Q/N-rich domain protein PQN-75, Prio...    70  2e-11
ref|XP_331491.1| predicted protein [Neurospora crassa] gi|289267...    70  3e-11
ref|NP_062318.1| formin 2 [Mus musculus] gi|13124214|sp|Q9JL04|F...    69  4e-11

>ref|NP_741367.1| prion-like Q/N-rich domain protein PQN-75, Prion-like Q/N-rich
           domain protein (50.4 kD) (pqn-75) [Caenorhabditis
           elegans] gi|22532805|gb|AAM97960.1|
           Prion-like-(q/n-rich)-domain-bearing protein protein 75,
           isoform b [Caenorhabditis elegans]
          Length = 518

 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 55/160 (34%), Positives = 64/160 (39%), Gaps = 13/160 (8%)
 Frame = -3

Query: 634 QTRKG----RKSPPSPSLGPPPSPNLGLPPSPGLGKPPRQQL------PRCVSPAQPPRR 485
           QT+ G    R++PP+ S  PPP P  G PP  G G PP          PR  SP  PP  
Sbjct: 220 QTQNGFRGKRQAPPAGSPPPPPPPK-GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 278

Query: 484 QLPGSLGRGLPPPPPRSGPATPAPPSGS-PSSETPPNFPAAGSAGSPASLAAPASVLGSV 308
             P     G PPPP    P  P PP GS P+   PP  P AG +  PA   +P       
Sbjct: 279 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--PQAGGSPPPAGTGSPP------ 330

Query: 307 AHSQAWRTDPRTLKCLYE--PALGHSPCSATPEGSDMAGG 194
                    PR  +   E  P  G  P  + P G    GG
Sbjct: 331 -------PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGG 363

 Score = 55.5 bits (132), Expect = 7e-07
 Identities = 52/154 (33%), Positives = 58/154 (36%), Gaps = 10/154 (6%)
 Frame = -3

Query: 628 RKGRKSPPSPSLGPPPSPNLGLPPSPGLGKPPRQQLPRCVSPAQPPR--RQLP------G 473
           R G   PP P  G PP+ +L  PP    G PP        SP  PPR  RQ P      G
Sbjct: 293 RAGSPPPPPPPRGSPPTGSL--PPPQAGGSPPPAGTG---SPPPPPRQKRQAPERSPPTG 347

Query: 472 SLGRGLPPP--PPRSGPATPAPPSGSPSSETPPNFPAAGSAGSPASLAAPASVLGSVAHS 299
           S   G PP   PPR GP   +  S S S E P   P  G  G P   +  +S       S
Sbjct: 348 SPPTGSPPTGRPPRGGPGKSSEES-SESREGPRGGPRGGPRGGPRKSSEESS------ES 400

Query: 298 QAWRTDPRTLKCLYEPALGHSPCSATPEGSDMAG 197
           +     PR       P  G  P    P GS   G
Sbjct: 401 REEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTG 434

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 49/157 (31%), Positives = 61/157 (38%), Gaps = 12/157 (7%)
 Frame = -3

Query: 628 RKGRKSPP-SPSLGPPP--SPNLGLPPSPGLGKPPRQQL---------PRCVSPAQPPRR 485
           R+ R++P  SP  G PP  SP  G PP  G GK   +           PR   P   PR+
Sbjct: 334 RQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRG-GPRGGPRK 392

Query: 484 QLPGSLGRGLPPPPPRSGPATPAPPSGSPSSETPPNFPAAGSAGSPASLAAPASVLGSVA 305
               S      P  PR  P T +PP+GSP +  PP        GSP +  +P + L S  
Sbjct: 393 SSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPR-------GSPPT-GSPPTGLPSRQ 444

Query: 304 HSQAWRTDPRTLKCLYEPALGHSPCSATPEGSDMAGG 194
             QA    P           G  P  + P G    GG
Sbjct: 445 KRQAPEDRP----------TGSPPTGSPPTGRPHRGG 471

 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 37/105 (35%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
 Frame = -3

Query: 592 GPPPSPNLGLPPSPGLGKPPRQQLPRCVSPAQPPRRQLPGSLGRGLPPPPPRSGPATPAP 413
           GP  SP  G PP+   G PP  + PR   P   P   LP    R  P   P   P T +P
Sbjct: 406 GPRRSPPTGSPPT---GSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSP 462

Query: 412 PSGSP---------SSET------PPNFPAAGS--AGSPASLAAP 329
           P+G P         SSE+      P   P  GS   GSP + A P
Sbjct: 463 PTGRPHRGGPGKSESSESREGPRGPRRSPPTGSPPTGSPPTGAPP 507

 Score = 33.5 bits (75), Expect = 2.7
 Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
 Frame = +3

Query: 342 EAGDPAEPAAGKFGGVSEEGEPEGGAGVA----GPERGGGGGRP----RPSEPGSWRRGG 497
           + G    P  G FGG +    P GG   A    G  +GG GG+      P   G+ ++GG
Sbjct: 52  QGGFSGSPQQGGFGGRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFSGAPQGFGNNQQGG 111

Query: 498 WAGL--TQRGSCCRGGLPRPGDGGSPRFGDGGGPRLGDGG 611
           + G    Q G   R G P P  G S      GG + G GG
Sbjct: 112 FGGNQGNQGGFGGRTGSPPPFGGFSGAPQGFGGNQGGFGG 151

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 47/169 (27%), Positives = 51/169 (29%), Gaps = 33/169 (19%)
 Frame = +3

Query: 189 QLPPAMSLPSGVAEHGE*PRAGSYRHFKVRGSVRQA*ECATEP--RTEAGAAREAGDPAE 362
           Q PPA S P      G  P AGS       GS        + P  RT +      G P  
Sbjct: 230 QAPPAGSPPPPPPPKGSPPLAGS-------GSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282

Query: 363 PAAG------KFGGVSEEGEPEGGAGVAGPERGGGGGRPRPSEPGSW-----------RR 491
           P AG      + G       P G            GG P P+  GS             R
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPER 342

Query: 492 GGWAGLTQRGSCCRGGLPRPGDG--------------GSPRFGDGGGPR 596
               G    GS   G  PR G G              G PR G  GGPR
Sbjct: 343 SPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPR 391

>ref|NP_741366.1| prion-like Q/N-rich domain protein PQN-75, Prion-like Q/N-rich
           domain protein (pqn-75) [Caenorhabditis elegans]
           gi|7508879|pir||T28770 hypothetical protein W03D2.1 -
           Caenorhabditis elegans gi|22532806|gb|AAM97961.1|
           Prion-like-(q/n-rich)-domain-bearing protein protein 75,
           isoform c [Caenorhabditis elegans]
          Length = 539

 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 55/160 (34%), Positives = 64/160 (39%), Gaps = 13/160 (8%)
 Frame = -3

Query: 634 QTRKG----RKSPPSPSLGPPPSPNLGLPPSPGLGKPPRQQL------PRCVSPAQPPRR 485
           QT+ G    R++PP+ S  PPP P  G PP  G G PP          PR  SP  PP  
Sbjct: 241 QTQNGFRGKRQAPPAGSPPPPPPPK-GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 299

Query: 484 QLPGSLGRGLPPPPPRSGPATPAPPSGS-PSSETPPNFPAAGSAGSPASLAAPASVLGSV 308
             P     G PPPP    P  P PP GS P+   PP  P AG +  PA   +P       
Sbjct: 300 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--PQAGGSPPPAGTGSPP------ 351

Query: 307 AHSQAWRTDPRTLKCLYE--PALGHSPCSATPEGSDMAGG 194
                    PR  +   E  P  G  P  + P G    GG
Sbjct: 352 -------PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGG 384

 Score = 55.5 bits (132), Expect = 7e-07
 Identities = 52/154 (33%), Positives = 58/154 (36%), Gaps = 10/154 (6%)
 Frame = -3

Query: 628 RKGRKSPPSPSLGPPPSPNLGLPPSPGLGKPPRQQLPRCVSPAQPPR--RQLP------G 473
           R G   PP P  G PP+ +L  PP    G PP        SP  PPR  RQ P      G
Sbjct: 314 RAGSPPPPPPPRGSPPTGSL--PPPQAGGSPPPAGTG---SPPPPPRQKRQAPERSPPTG 368

Query: 472 SLGRGLPPP--PPRSGPATPAPPSGSPSSETPPNFPAAGSAGSPASLAAPASVLGSVAHS 299
           S   G PP   PPR GP   +  S S S E P   P  G  G P   +  +S       S
Sbjct: 369 SPPTGSPPTGRPPRGGPGKSSEES-SESREGPRGGPRGGPRGGPRKSSEESS------ES 421

Query: 298 QAWRTDPRTLKCLYEPALGHSPCSATPEGSDMAG 197
           +     PR       P  G  P    P GS   G
Sbjct: 422 REEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTG 455

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 49/157 (31%), Positives = 61/157 (38%), Gaps = 12/157 (7%)
 Frame = -3

Query: 628 RKGRKSPP-SPSLGPPP--SPNLGLPPSPGLGKPPRQQL---------PRCVSPAQPPRR 485
           R+ R++P  SP  G PP  SP  G PP  G GK   +           PR   P   PR+
Sbjct: 355 RQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRG-GPRGGPRK 413

Query: 484 QLPGSLGRGLPPPPPRSGPATPAPPSGSPSSETPPNFPAAGSAGSPASLAAPASVLGSVA 305
               S      P  PR  P T +PP+GSP +  PP        GSP +  +P + L S  
Sbjct: 414 SSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPR-------GSPPT-GSPPTGLPSRQ 465

Query: 304 HSQAWRTDPRTLKCLYEPALGHSPCSATPEGSDMAGG 194
             QA    P           G  P  + P G    GG
Sbjct: 466 KRQAPEDRP----------TGSPPTGSPPTGRPHRGG 492

 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 37/105 (35%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
 Frame = -3

Query: 592 GPPPSPNLGLPPSPGLGKPPRQQLPRCVSPAQPPRRQLPGSLGRGLPPPPPRSGPATPAP 413
           GP  SP  G PP+   G PP  + PR   P   P   LP    R  P   P   P T +P
Sbjct: 427 GPRRSPPTGSPPT---GSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSP 483

Query: 412 PSGSP---------SSET------PPNFPAAGS--AGSPASLAAP 329
           P+G P         SSE+      P   P  GS   GSP + A P
Sbjct: 484 PTGRPHRGGPGKSESSESREGPRGPRRSPPTGSPPTGSPPTGAPP 528

 Score = 33.5 bits (75), Expect = 2.7
 Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
 Frame = +3

Query: 342 EAGDPAEPAAGKFGGVSEEGEPEGGAGVA----GPERGGGGGRP----RPSEPGSWRRGG 497
           + G    P  G FGG +    P GG   A    G  +GG GG+      P   G+ ++GG
Sbjct: 73  QGGFSGSPQQGGFGGRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFSGAPQGFGNNQQGG 132

Query: 498 WAGL--TQRGSCCRGGLPRPGDGGSPRFGDGGGPRLGDGG 611
           + G    Q G   R G P P  G S      GG + G GG
Sbjct: 133 FGGNQGNQGGFGGRTGSPPPFGGFSGAPQGFGGNQGGFGG 172

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 47/169 (27%), Positives = 51/169 (29%), Gaps = 33/169 (19%)
 Frame = +3

Query: 189 QLPPAMSLPSGVAEHGE*PRAGSYRHFKVRGSVRQA*ECATEP--RTEAGAAREAGDPAE 362
           Q PPA S P      G  P AGS       GS        + P  RT +      G P  
Sbjct: 251 QAPPAGSPPPPPPPKGSPPLAGS-------GSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303

Query: 363 PAAG------KFGGVSEEGEPEGGAGVAGPERGGGGGRPRPSEPGSW-----------RR 491
           P AG      + G       P G            GG P P+  GS             R
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPER 363

Query: 492 GGWAGLTQRGSCCRGGLPRPGDG--------------GSPRFGDGGGPR 596
               G    GS   G  PR G G              G PR G  GGPR
Sbjct: 364 SPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPR 412

>ref|NP_741365.1| prion-like Q/N-rich domain protein PQN-75, Prion-like Q/N-rich
           domain protein (pqn-75) [Caenorhabditis elegans]
           gi|14916375|gb|AAC48255.2|
           Prion-like-(q/n-rich)-domain-bearing protein protein 75,
           isoform a [Caenorhabditis elegans]
          Length = 524

 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 55/160 (34%), Positives = 64/160 (39%), Gaps = 13/160 (8%)
 Frame = -3

Query: 634 QTRKG----RKSPPSPSLGPPPSPNLGLPPSPGLGKPPRQQL------PRCVSPAQPPRR 485
           QT+ G    R++PP+ S  PPP P  G PP  G G PP          PR  SP  PP  
Sbjct: 226 QTQNGFRGKRQAPPAGSPPPPPPPK-GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 284

Query: 484 QLPGSLGRGLPPPPPRSGPATPAPPSGS-PSSETPPNFPAAGSAGSPASLAAPASVLGSV 308
             P     G PPPP    P  P PP GS P+   PP  P AG +  PA   +P       
Sbjct: 285 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP--PQAGGSPPPAGTGSPP------ 336

Query: 307 AHSQAWRTDPRTLKCLYE--PALGHSPCSATPEGSDMAGG 194
                    PR  +   E  P  G  P  + P G    GG
Sbjct: 337 -------PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGG 369

 Score = 55.5 bits (132), Expect = 7e-07
 Identities = 52/154 (33%), Positives = 58/154 (36%), Gaps = 10/154 (6%)
 Frame = -3

Query: 628 RKGRKSPPSPSLGPPPSPNLGLPPSPGLGKPPRQQLPRCVSPAQPPR--RQLP------G 473
           R G   PP P  G PP+ +L  PP    G PP        SP  PPR  RQ P      G
Sbjct: 299 RAGSPPPPPPPRGSPPTGSL--PPPQAGGSPPPAGTG---SPPPPPRQKRQAPERSPPTG 353

Query: 472 SLGRGLPPP--PPRSGPATPAPPSGSPSSETPPNFPAAGSAGSPASLAAPASVLGSVAHS 299
           S   G PP   PPR GP   +  S S S E P   P  G  G P   +  +S       S
Sbjct: 354 SPPTGSPPTGRPPRGGPGKSSEES-SESREGPRGGPRGGPRGGPRKSSEESS------ES 406

Query: 298 QAWRTDPRTLKCLYEPALGHSPCSATPEGSDMAG 197
           +     PR       P  G  P    P GS   G
Sbjct: 407 REEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTG 440

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 49/157 (31%), Positives = 61/157 (38%), Gaps = 12/157 (7%)
 Frame = -3

Query: 628 RKGRKSPP-SPSLGPPP--SPNLGLPPSPGLGKPPRQQL---------PRCVSPAQPPRR 485
           R+ R++P  SP  G PP  SP  G PP  G GK   +           PR   P   PR+
Sbjct: 340 RQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRG-GPRGGPRK 398

Query: 484 QLPGSLGRGLPPPPPRSGPATPAPPSGSPSSETPPNFPAAGSAGSPASLAAPASVLGSVA 305
               S      P  PR  P T +PP+GSP +  PP        GSP +  +P + L S  
Sbjct: 399 SSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPR-------GSPPT-GSPPTGLPSRQ 450

Query: 304 HSQAWRTDPRTLKCLYEPALGHSPCSATPEGSDMAGG 194
             QA    P           G  P  + P G    GG
Sbjct: 451 KRQAPEDRP----------TGSPPTGSPPTGRPHRGG 477

 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 37/105 (35%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
 Frame = -3

Query: 592 GPPPSPNLGLPPSPGLGKPPRQQLPRCVSPAQPPRRQLPGSLGRGLPPPPPRSGPATPAP 413
           GP  SP  G PP+   G PP  + PR   P   P   LP    R  P   P   P T +P
Sbjct: 412 GPRRSPPTGSPPT---GSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSP 468

Query: 412 PSGSP---------SSET------PPNFPAAGS--AGSPASLAAP 329
           P+G P         SSE+      P   P  GS   GSP + A P
Sbjct: 469 PTGRPHRGGPGKSESSESREGPRGPRRSPPTGSPPTGSPPTGAPP 513

 Score = 33.5 bits (75), Expect = 2.7
 Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
 Frame = +3

Query: 342 EAGDPAEPAAGKFGGVSEEGEPEGGAGVA----GPERGGGGGRP----RPSEPGSWRRGG 497
           + G    P  G FGG +    P GG   A    G  +GG GG+      P   G+ ++GG
Sbjct: 58  QGGFSGSPQQGGFGGRTGSPPPFGGFSGAPQGFGGNQGGFGGQTGFSGAPQGFGNNQQGG 117

Query: 498 WAGL--TQRGSCCRGGLPRPGDGGSPRFGDGGGPRLGDGG 611
           + G    Q G   R G P P  G S      GG + G GG
Sbjct: 118 FGGNQGNQGGFGGRTGSPPPFGGFSGAPQGFGGNQGGFGG 157

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 47/169 (27%), Positives = 51/169 (29%), Gaps = 33/169 (19%)
 Frame = +3

Query: 189 QLPPAMSLPSGVAEHGE*PRAGSYRHFKVRGSVRQA*ECATEP--RTEAGAAREAGDPAE 362
           Q PPA S P      G  P AGS       GS        + P  RT +      G P  
Sbjct: 236 QAPPAGSPPPPPPPKGSPPLAGS-------GSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288

Query: 363 PAAG------KFGGVSEEGEPEGGAGVAGPERGGGGGRPRPSEPGSW-----------RR 491
           P AG      + G       P G            GG P P+  GS             R
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPER 348

Query: 492 GGWAGLTQRGSCCRGGLPRPGDG--------------GSPRFGDGGGPR 596
               G    GS   G  PR G G              G PR G  GGPR
Sbjct: 349 SPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPR 397

>ref|XP_331491.1| predicted protein [Neurospora crassa] gi|28926713|gb|EAA35680.1|
           predicted protein [Neurospora crassa]
          Length = 283

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 57/159 (35%), Positives = 69/159 (42%), Gaps = 9/159 (5%)
 Frame = -3

Query: 610 PPSPSLGPPPSPNLGLPPS----PGLGKPPRQQLPRCVS-PAQPPRRQLPGSLGRGLPPP 446
           PP+ S  PPP P   +PP+    P    PP    P   S P+ PP          G PP 
Sbjct: 111 PPASSGSPPPPPQSSVPPASSGGPSAPPPPPPSPPASSSAPSAPPASS-------GAPPA 163

Query: 445 PPRSGPATPAPP--SGSPSSETPPNFPAAGSAGSPASLAAPASVLGSVAHSQAWRTDPRT 272
           PP S  A PAPP  SGSPS   PP+ PA  S G+P+  A PAS   S ++  +    P  
Sbjct: 164 PPASSGAPPAPPASSGSPSPPPPPHPPA--STGAPS--APPASTQPSPSNPASSAAPP-- 217

Query: 271 LKCLYEPALGHSPCSATP--EGSDMAGGNWGKVAPGSTT 161
                 P     P +  P   GS   GG  G  AP + T
Sbjct: 218 ------PPHNSGPSATEPSASGSSSGGGGGGGGAPPTAT 250

 Score = 40.8 bits (94), Expect = 0.017
 Identities = 28/62 (45%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
 Frame = -3

Query: 478 PGSLGRGLPPPPPRSGPATPAPP--------SGSPSS--ETPPNFPAAGSAGS--PASLA 335
           P S G   PPPPP S  + P PP        SG PS+    PP+ PA+ SA S  PAS  
Sbjct: 100 PVSSGTPPPPPPPASSGSPPPPPQSSVPPASSGGPSAPPPPPPSPPASSSAPSAPPASSG 159

Query: 334 AP 329
           AP
Sbjct: 160 AP 161

>ref|NP_062318.1| formin 2 [Mus musculus] gi|13124214|sp|Q9JL04|FMN2_MOUSE Formin 2
            gi|8118086|gb|AAF72883.1|AF218940_1 formin-2 [Mus
            musculus]
          Length = 1567

 Score = 69.3 bits (168), Expect = 4e-11
 Identities = 44/102 (43%), Positives = 49/102 (47%), Gaps = 6/102 (5%)
 Frame = -3

Query: 610  PPSPSLG---PPPSPNLGLPPSP---GLGKPPRQQLPRCVSPAQPPRRQLPGSLGRGLPP 449
            PP P +G   PPP P +G+PP P   G+G PP   LP    P  PP   LPGS   G+PP
Sbjct: 991  PPLPGVGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGMGIPPPPP---LPGS---GIPP 1044

Query: 448  PPPRSGPATPAPPSGSPSSETPPNFPAAGSAGSPASLAAPAS 323
            PP   G A P PP   P    PP  P    AG P     P S
Sbjct: 1045 PPALPGVAIPPPPP-LPGMGVPPPAPPPPGAGIPPPPLLPGS 1085

 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 41/98 (41%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
 Frame = -3

Query: 610  PPSPSLG---PPPSPNLGLPPSP---GLGKPPRQQLPRCVSPAQPPRRQLPGSLGRGLPP 449
            PP P +G   PPP P +G+PP P   G+G PP   LP    P  PP   LPG    G+PP
Sbjct: 925  PPLPGMGIPPPPPLPGMGIPPPPPLPGVGIPPPPPLPGVGIPPPPP---LPGV---GIPP 978

Query: 448  PPPRSGPATPAPPS----GSPSSETPPNFPAAGSAGSP 347
            PPP  G   P PP     G P    PP  P  G    P
Sbjct: 979  PPPLPGVGIPPPPPLPGVGIPP---PPPLPGVGIPPPP 1013

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 41/98 (41%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
 Frame = -3

Query: 610  PPSPSLG---PPPSPNLGLPPSP---GLGKPPRQQLPRCVSPAQPPRRQLPGSLGRGLPP 449
            PP P +G   PPP P +G+PP P   G+G PP   LP    P  PP   LPG    G+PP
Sbjct: 936  PPLPGMGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGVGIPPPPP---LPGV---GIPP 989

Query: 448  PPPRSGPATPAPPS----GSPSSETPPNFPAAGSAGSP 347
            PPP  G   P PP     G P    PP  P  G    P
Sbjct: 990  PPPLPGVGIPPPPPLPGVGIPP---PPPLPGVGIPPPP 1024

 Score = 62.4 bits (150), Expect = 5e-09
 Identities = 38/83 (45%), Positives = 40/83 (47%)
 Frame = -3

Query: 610  PPSPSLGPPPSPNLGLPPSPGLGKPPRQQLPRCVSPAQPPRRQLPGSLGRGLPPPPPRSG 431
            PP P LG PP P    PP PG+G PP   LP    P  PP   LPG    G+PPPPP  G
Sbjct: 900  PPLPGLGVPPPPPA--PPLPGMGIPPPPPLPGMGIPPPPP---LPGM---GIPPPPPLPG 951

Query: 430  PATPAPPSGSPSSETPPNFPAAG 362
               P PP   P    PP  P  G
Sbjct: 952  VGIPPPPP-LPGVGIPPPPPLPG 973

 Score = 48.9 bits (115), Expect = 6e-05
 Identities = 37/95 (38%), Positives = 40/95 (41%), Gaps = 11/95 (11%)
 Frame = -3

Query: 613  SPPSPSL------GP-----PPSPNLGLPPSPGLGKPPRQQLPRCVSPAQPPRRQLPGSL 467
            SP +P+L      GP     PP P    PP PGLG PP            PP   LPG  
Sbjct: 876  SPTAPALQFSNLQGPEMLPAPPQP----PPLPGLGVPP-----------PPPAPPLPGM- 919

Query: 466  GRGLPPPPPRSGPATPAPPSGSPSSETPPNFPAAG 362
              G+PPPPP  G   P PP   P    PP  P  G
Sbjct: 920  --GIPPPPPLPGMGIPPPPP-LPGMGIPPPPPLPG 951

 Score = 35.0 bits (79), Expect = 0.93
 Identities = 35/98 (35%), Positives = 38/98 (38%), Gaps = 10/98 (10%)
 Frame = -3

Query: 610  PPSPSLGPPPS----PNLGL--PPSPGLGKPPRQQLPRCVSPA-QPPRRQLPGSLGRGLP 452
            PP+P L    S    P LG+  PP P L       LP   +PA Q    Q P  L     
Sbjct: 839  PPAPPLPCTESSSFMPGLGMAIPPPPCLSDITVPALPSPTAPALQFSNLQGPEMLPAPPQ 898

Query: 451  PPP-PRSG--PATPAPPSGSPSSETPPNFPAAGSAGSP 347
            PPP P  G  P  PAPP        PP  P  G    P
Sbjct: 899  PPPLPGLGVPPPPPAPPLPGMGIPPPPPLPGMGIPPPP 936

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 34/112 (30%), Positives = 46/112 (40%), Gaps = 13/112 (11%)
 Frame = -3

Query: 637 LQTRKGRKSPPSPSLGPPPSPNLGLPPSPGLGKPPRQQLPRCVSPAQPPRRQLPGSLGRG 458
           LQ  +   +PP+ ++ P P   LGL     LG  PR +  +    A P R  LP +    
Sbjct: 211 LQDSEEPAAPPT-AISPQPGAFLGLDQFL-LG--PRSEAEKDTVQALPVRPDLPETTKSL 266

Query: 457 LPPPPPRSG-------PATPAPPSGSPSSETPPNF------PAAGSAGSPAS 341
           +P  PP SG       P     PS    S + P F      P  G+AG P +
Sbjct: 267 VPEHPPSSGSHLTSETPGYATAPSAVTDSLSSPAFTFPEAGPGEGAAGVPVA 318

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
 Frame = -3

Query: 640 HLQTRKGRKSPP--SPSLGPPPSPNLGLPPSPGLGKPPRQQLPRCVSPAQPPRRQ--LPG 473
           +++T   + S P  SPS  P  SP +   P P +   PR  L    +PA+  R +  L G
Sbjct: 395 YIKTTTRQLSSPNHSPSQSPNQSPRIKKRPDPSVSPSPRTALASAAAPAKKHRLEGGLTG 454

Query: 472 SLGRG------LPPPPPRSGPATPAPPSGSPSSETPPNFP--AAGSAGSPAS 341
            L R       L    P +G +      G+ + ++    P  AA + G+PA+
Sbjct: 455 GLSRSADWTEELGVRTPGAGGSVHLLGRGATADDSGGGSPVLAAKAPGAPAT 506

 Score = 33.5 bits (75), Expect = 2.7
 Identities = 34/102 (33%), Positives = 41/102 (39%), Gaps = 19/102 (18%)
 Frame = -3

Query: 598  SLGPPPSPNLGLPPSPG--------LGKPPRQQLPRC--VSPAQPPRR---QLPGSLGRG 458
            +L PP +P  GLP SP         L  P   Q   C  +S    PRR   QL     + 
Sbjct: 733  TLPPPKAPPEGLPGSPAAASGESALLTSPSGPQTKFCSEISLIVSPRRISVQLDAQQIQS 792

Query: 457  ---LPPPPPRSG---PATPAPPSGSPSSETPPNFPAAGSAGS 350
               LPPPPP  G      P+ PS    SET      + S G+
Sbjct: 793  ASQLPPPPPLLGSDSQGQPSQPSLHTESETSHEHSVSSSFGN 834



EST assemble image


clone accession position
1 HCL068e04_r AV643371 1 503
2 MXL071c01_r BP097171 103 482
3 LCL074a12_r AV630144 114 375
4 HCL013f03_r AV640280 117 346
5 HCL072c03_r AV643582 159 647
6 LCL015a07_r AV626763 233 747
7 LCL015b05_r AV626767 247 675
8 HCL063a11_r AV643061 282 530




Chlamydomonas reinhardtii
Kazusa DNA Research Institute