KCC002283A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC002283A_C01 KCC002283A_c01
tCCTTGTGCATTCGGTTTTACCAATCGCCCAATTTATAAAAGTTGCCGCGCAAGTGTTGA
CACGCGAGCAGAGTTGAGGCCCCTTTCGTTTTCGCGCCGGTGACACGATGCAGTGCGCCC
TGCATGCATCGCCCCGCGCGGGCGTGCAGGTGCGGTCGCGGACTTCTGCAGACCGCATCC
TCCCGGGGCCGGTGCTGCGGTCGCCGCTTGGGCCGCTGTCTAGCAGGGCCCCGTTCTCAA
CTTCGACTCTAAAGCACCAGCCTGAGCAGCCATCGTCCCAGGTCGCTTGCCCCGCGTCAG
TAGACTATGGCTATCCTTCTGCTCCGGAGCTGCCGCCTGAGCGCATGGGCGAGGCTGCTC
GTCGCGCGCTGTCTCGCGCGACCTCGGCCGTGCGCCGGTATGGCTGGTTGAGCTTCTGGG
CTCAGCTCACGCTGTCGGTGGTGGGAGGCGTCATTCTGCT
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002283A_C01 KCC002283A_c01
(460 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_294181.1| hypothetical protein [Deinococcus radiodurans] ... 42 0.002
gb|AAN10251.1| putative secreted protein [Streptomyces viridifac... 40 0.012
ref|NP_565372.1| expressed protein [Arabidopsis thaliana] gi|254... 39 0.028
dbj|BAC58076.2| large tegument protein [Cercopithecine herpesvir... 38 0.047
ref|NP_510854.1| carboxyl ester lipase like (XS293) [Caenorhabdi... 38 0.062
>ref|NP_294181.1| hypothetical protein [Deinococcus radiodurans]
gi|7472740|pir||F75518 hypothetical protein -
Deinococcus radiodurans (strain R1)
gi|6458143|gb|AAF10038.1|AE001904_14 hypothetical
protein [Deinococcus radiodurans]
Length = 839
Score = 42.4 bits (98), Expect = 0.002
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Frame = -2
Query: 441 PPTA*AEPRSSTSHTGARPRSRETARDEQP------RPCAQAAAPEQKDSHSLLTRGKRP 280
PPT E + T + A P S A +E RP A++PE ++ RG+ P
Sbjct: 304 PPTPTRET-AQTEASPAAPNSSAAAPNEPASEPVAGRPGTAASSPESASPVTVTPRGETP 362
Query: 279 GTMAAQAGALESKLRTGPC*TAAQAATAAPAPGGCGLQKSATAPARPRGAMHAGRTA 109
T A+ ++ P +A++ A+AA PG ++ PA P A AGR++
Sbjct: 363 DTAASAGTPSAGRVTPAPAPSASEGASAARTPGAG--SQTPPIPATPIPATPAGRSS 417
>gb|AAN10251.1| putative secreted protein [Streptomyces viridifaciens]
Length = 306
Score = 40.0 bits (92), Expect = 0.012
Identities = 37/119 (31%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Frame = -2
Query: 441 PPTA*AEPRSS----TSHTGA--RPRSRETARDEQPRPCAQAAAPEQK-----DSHSLLT 295
PP+A A P S T+ + A RP + + PRPCA+ AA E +H
Sbjct: 110 PPSAPASPSGSAPAATAQSAAVTRPAAPASPASHLPRPCAEPAASEHSRTAPPATHPAAD 169
Query: 294 RGKRPGTMAAQAGALESKLRTGPC*TAAQAATAAPAPGGCGLQKSATAPARPRGAMHAG 118
P AQA A S +R+ A A AAP +A PA P G + G
Sbjct: 170 PSTSPAGTVAQASA-ASAIRSAGTPVAQAAQHAAPV---ASASSAAVPPAAPSGPAYQG 224
>ref|NP_565372.1| expressed protein [Arabidopsis thaliana] gi|25411626|pir||B84527
hypothetical protein At2g15290 [imported] - Arabidopsis
thaliana gi|4662632|gb|AAD26904.1| expressed protein
[Arabidopsis thaliana] gi|15982807|gb|AAL09751.1|
At2g15290/F27O10.6 [Arabidopsis thaliana]
gi|17528962|gb|AAL38691.1| unknown protein [Arabidopsis
thaliana] gi|21689685|gb|AAM67464.1| unknown protein
[Arabidopsis thaliana]
Length = 296
Score = 38.9 bits (89), Expect = 0.028
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Frame = +3
Query: 123 HASPRAGVQVRSRTSADRILPGPVLRSPLGPLSSRAPFSTSTLKHQPEQPSSQVACPASV 302
H+ + RS + +L P ++ + S S + +PS P++V
Sbjct: 25 HSFNHQSLSTRSLPLFNPLLLAPKKKTTISSYQSPPSLSVYGFQIGGSKPSFT---PSTV 81
Query: 303 DYGYPSAP-------ELPPERMGEAARRALSRATSAVRRYGWLSFWAQLTLSVVGGVIL 458
+ YP++P E+ ++ + A+R L + + +R G + FW QL +VV VIL
Sbjct: 82 AFSYPTSPSSVPGDNEVDKAKLAQVAKR-LEKTSRYFKRLGSIGFWGQLVSTVVAAVIL 139
>dbj|BAC58076.2| large tegument protein [Cercopithecine herpesvirus 1]
Length = 3326
Score = 38.1 bits (87), Expect = 0.047
Identities = 32/103 (31%), Positives = 35/103 (33%), Gaps = 1/103 (0%)
Frame = -2
Query: 444 PPPTA*AEPRSSTSHTGARPRSRETARDEQPRPCAQAAAPEQKDSHSLLTRGKRPGTMAA 265
PPP A P TS P R P A AAP + + P AA
Sbjct: 2823 PPPVAATGPTRPTSPATPTPTVAAAGRASAPPAPAAPAAPAAPAAPAAPAAPAAPAAPAA 2882
Query: 264 QAGALESKLRTGPC*TAAQAATAAP-APGGCGLQKSATAPARP 139
A P AA AA AAP AP + APA P
Sbjct: 2883 PAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAP 2925
Score = 32.7 bits (73), Expect = 2.0
Identities = 31/100 (31%), Positives = 35/100 (35%)
Frame = -2
Query: 444 PPPTA*AEPRSSTSHTGARPRSRETARDEQPRPCAQAAAPEQKDSHSLLTRGKRPGTMAA 265
P PT A R+S A P A P A AAP + + P AA
Sbjct: 2840 PTPTVAAAGRASAPPAPAAP-----AAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAA 2894
Query: 264 QAGALESKLRTGPC*TAAQAATAAPAPGGCGLQKSATAPA 145
A P AA AA AAPA +A APA
Sbjct: 2895 PAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAPA 2934
>ref|NP_510854.1| carboxyl ester lipase like (XS293) [Caenorhabditis elegans]
gi|25513577|pir||D89756 protein T23E7.2b [imported] -
Caenorhabditis elegans gi|2435547|gb|AAB71258.1|
Hypothetical protein T23E7.2b [Caenorhabditis elegans]
Length = 880
Score = 37.7 bits (86), Expect = 0.062
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = -2
Query: 354 PRPCAQAAAPEQKDSHSLLTRGKRPGTMAAQAGALESKLRTGPC*TAAQAATAAPAPGGC 175
PR A + P S+ + G PGT + + ++ P TA AATA PA
Sbjct: 323 PRSAAPSDVPPTPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPA--AT 380
Query: 174 GLQKSATA------PARPRGAMHAGRTAS 106
G K+ TA PA PR ++ A T S
Sbjct: 381 GTPKADTAFNFEETPATPRSSVPATPTES 409
EST assemble image
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clone |
accession |
position |
1 |
HCL031c04_r |
AV641296 |
1 |
205 |
2 |
HCL012c12_r |
AV640217 |
2 |
268 |
3 |
HCL067b07_r |
AV643294 |
3 |
460 |
4 |
HCL058f05_r |
AV642818 |
7 |
446 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute