Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002271A_C01 KCC002271A_c01
(453 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_727413.1| CG32686-PB [Drosophila melanogaster] gi|2283202... 35 0.39
ref|NP_825382.1| putative two-component system sensor kinase/res... 35 0.51
ref|NP_294467.1| sensor histidine kinase [Deinococcus radioduran... 33 1.1
dbj|BAC22387.1| P0005C02.6 [Oryza sativa (japonica cultivar-group)] 33 1.1
sp|Q62645|NME4_RAT Glutamate [NMDA] receptor subunit epsilon 4 p... 32 2.5
>ref|NP_727413.1| CG32686-PB [Drosophila melanogaster] gi|22832021|gb|AAN09258.1|
CG32686-PB [Drosophila melanogaster]
Length = 1082
Score = 35.0 bits (79), Expect = 0.39
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 337 GTALSSPQLPANSRPNSGACAPRASGTSPRR 429
GT+ S P + +N RP++GA P A+G P+R
Sbjct: 73 GTSASQPPVKSNPRPSNGASGPSAAGAVPKR 103
>ref|NP_825382.1| putative two-component system sensor kinase/response regulator,
bifunctional protein [Streptomyces avermitilis MA-4680]
gi|29607861|dbj|BAC71917.1| putative two-component system
sensor kinase/response regulator, bifunctional protein
[Streptomyces avermitilis MA-4680]
Length = 1479
Score = 34.7 bits (78), Expect = 0.51
Identities = 41/145 (28%), Positives = 56/145 (38%), Gaps = 7/145 (4%)
Frame = +2
Query: 23 IVSECPPTKPVGLLTPLPEWAQRPFPQNVWR*PRNKLPFPGCAAA*MDEGGVAWRCRKPC 202
+ + PP P TP P P P PR P P AAA +D R
Sbjct: 1059 VAGQQPPAAPQPTATPAPG---TPLPPERAAQPRAAQPLPAEAAAPIDPNSTQGRAISVR 1115
Query: 203 AGGQGL---QRNSHRSCCRASSGPLPGQVHDLP*PCQ---QGRCSNLAPG*ELRCQAP-N 361
GQG+ ++ + ++ A + P P P P Q GR L E + P N
Sbjct: 1116 TLGQGVPFARQAAAQNKPGAQAQPRPQSQTPTPPPHQTNGSGRRRKLGTPPEPAAERPEN 1175
Query: 362 CRRTRAQTAGRAPQGQVGHHRGGAG 436
R + Q AG++PQ + GAG
Sbjct: 1176 AARPQPQ-AGQSPQARPAGATDGAG 1199
>ref|NP_294467.1| sensor histidine kinase [Deinococcus radiodurans]
gi|7473875|pir||A75481 sensor histidine kinase -
Deinococcus radiodurans (strain R1)
gi|6458453|gb|AAF10322.1|AE001930_3 sensor histidine
kinase [Deinococcus radiodurans]
Length = 566
Score = 33.5 bits (75), Expect = 1.1
Identities = 14/37 (37%), Positives = 26/37 (69%)
Frame = -3
Query: 130 LVSGSSPDILRKRPLRPLRKWREQTDRLGGRTLRDNI 20
L++G+ +L R LRPL++ R+ +R+GG+TL + +
Sbjct: 270 LLAGTLAYVLAGRALRPLQEVRQAAERIGGQTLTERV 306
>dbj|BAC22387.1| P0005C02.6 [Oryza sativa (japonica cultivar-group)]
Length = 213
Score = 33.5 bits (75), Expect = 1.1
Identities = 24/65 (36%), Positives = 28/65 (42%), Gaps = 2/65 (3%)
Frame = +2
Query: 80 WAQRPFPQNVWR*PRNKLPFPGCAAA*MDEGGVAWRCR--KPCAGGQGLQRNSHRSCCRA 253
WA P P N R P ++L AA +D V RCR +PC G R HR
Sbjct: 34 WAAGPPPPNHGRRPGDELHVAAPTAAGLDRSPVHRRCRLHRPCHGCASSARRRHR----- 88
Query: 254 SSGPL 268
GPL
Sbjct: 89 GDGPL 93
>sp|Q62645|NME4_RAT Glutamate [NMDA] receptor subunit epsilon 4 precursor (N-methyl
D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D)
Length = 1323
Score = 32.3 bits (72), Expect = 2.5
Identities = 30/96 (31%), Positives = 35/96 (36%), Gaps = 5/96 (5%)
Frame = +2
Query: 170 GGVAWRCRKPCAGGQGLQRNSHRSCCRASS-----GPLPGQVHDLP*PCQQGRCSNLAPG 334
GG AW CR CA + L H SC P P P P ++ RC
Sbjct: 1162 GGPAWHCRH-CASLELLPPPRHLSCSHDGLDGGWWAPPPPPWAAGPPPRRRARCG----- 1215
Query: 335 *ELRCQAPNCRRTRAQTAGRAPQGQVGHHRGGAGCG 442
C P+ R RA + RAP HHR G
Sbjct: 1216 ----CPRPHPHRPRA--SHRAPAAAPHHHRHRRAAG 1245
