KCC002270A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002270A_C01 KCC002270A_c01
cgcgtgggcgcatcacttataaggtcaggtatGGATTGATCTGATTGCGGGCCTTGGCCC
TGAAGCCCAGCTTCAACAAGCAGCAACGTGCAAGTCCAGCCTTCGACGTGGGGCTCGGGG
GCCCTGCCATCACAAATGTGGGGCCTCAAGGACACTAGATTCTTAGGAGCATTCGGTCCT
GGGCGCTGGGCTTCGCTGCGCAAGCGGACTGGCAAATGGCTTCCTTTCCCGGGCGGGCGC
GACTGCAGCCAGGCAAAGCAGGGATCATATGACTCGCTGAACTCTCGAGTTTCGCATGCG
GAGAGCAACACGCGCCGGGGCCGACGAGCGCCGCCCCAACCTCGCGCCCCCGCCCCTCCA
TCGGCGTCCGCAGCGGCTGCCTCCTGTCCGGTGCCCCCCAATGGCGGGTCCCCCTCGCCG
GCCTCCAGCTCTTCAGGCGGCCAGGCGTCTGAGGAGCAGGACCTGTCCATGGATCTGGAC
TACATGCCGGTGCTGGngccggtccgagaggcgct


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002270A_C01 KCC002270A_c01
         (515 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_039385.1| similar to KIAA1093 protein [Homo sapiens]            44  0.001
dbj|BAA83045.2| KIAA1093 protein [Homo sapiens]                        44  0.001
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (...    44  0.001
gb|AAA91850.1| paraneoplastic antigen                                  44  0.002
ref|NP_113896.1| adhesion regulating molecule 1; glycoprotein 11...    43  0.003

>ref|XP_039385.1| similar to KIAA1093 protein [Homo sapiens]
          Length = 1723

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
 Frame = +1

Query: 91   QVQPSTWGSGAL-PSQMWGLKDTRFLGAFGPGRWASLRKRTGKWLPFPGGRDCSQAKQGS 267
            Q + S W S A  P   WG      +G +G G  ASL  + G W       DC ++   +
Sbjct: 755  QTKNSNWESSASKPVSGWGEGGQNEIGTWGNGGNASLASKGG-W------EDCKRSPAWN 807

Query: 268  YDSLNSRVSHAESNTRRGRRAPPQPRAPAPPSASAAAASCPVPPNGGSPSPASSSSGGQA 447
                  R  ++ +   + ++ P QP  P P ++ +     P PP    PS +S SSG Q 
Sbjct: 808  E---TGRQPNSWNKQHQQQQPPQQPPPPQPEASGSWGGPPPPPPGNVRPSNSSWSSGPQP 864

Query: 448  SEEQD 462
            +  +D
Sbjct: 865  ATPKD 869

 Score = 33.5 bits (75), Expect = 1.6
 Identities = 34/139 (24%), Positives = 52/139 (36%), Gaps = 1/139 (0%)
 Frame = +1

Query: 49   GPWP*SPASTSSNVQVQPSTWGSGALPSQMWGLKDTRFLGAFGPGRWASLRKRTGKWLPF 228
            G W   P     NV+   S+W SG  P+     KD    G   P   +  RK        
Sbjct: 838  GSWGGPPPPPPGNVRPSNSSWSSGPQPATP---KDEEPSGWEEPSPQSISRKM------- 887

Query: 229  PGGRDCSQAKQGSYDSLNSRVSHAESNTRRGRRAPPQPRAPAPPSASAAAASCPVPPN-G 405
                D   +  G  +S N +  +      +G  AP +P  P P ++ +A+ S  +    G
Sbjct: 888  --DIDDGTSAWGDPNSYNYKNVNLWDKNSQGGPAPREPNLPTPMTSKSASDSKSMQDGWG 945

Query: 406  GSPSPASSSSGGQASEEQD 462
             S  P + +      EE+D
Sbjct: 946  ESDGPVTGARHPSWEEEED 964

>dbj|BAA83045.2| KIAA1093 protein [Homo sapiens]
          Length = 1727

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
 Frame = +1

Query: 91   QVQPSTWGSGAL-PSQMWGLKDTRFLGAFGPGRWASLRKRTGKWLPFPGGRDCSQAKQGS 267
            Q + S W S A  P   WG      +G +G G  ASL  + G W       DC ++   +
Sbjct: 760  QTKNSNWESSASKPVSGWGEGGQNEIGTWGNGGNASLASKGG-W------EDCKRSPAWN 812

Query: 268  YDSLNSRVSHAESNTRRGRRAPPQPRAPAPPSASAAAASCPVPPNGGSPSPASSSSGGQA 447
                  R  ++ +   + ++ P QP  P P ++ +     P PP    PS +S SSG Q 
Sbjct: 813  E---TGRQPNSWNKQHQQQQPPQQPPPPQPEASGSWGGPPPPPPGNVRPSNSSWSSGPQP 869

Query: 448  SEEQD 462
            +  +D
Sbjct: 870  ATPKD 874

 Score = 33.5 bits (75), Expect = 1.6
 Identities = 34/139 (24%), Positives = 52/139 (36%), Gaps = 1/139 (0%)
 Frame = +1

Query: 49   GPWP*SPASTSSNVQVQPSTWGSGALPSQMWGLKDTRFLGAFGPGRWASLRKRTGKWLPF 228
            G W   P     NV+   S+W SG  P+     KD    G   P   +  RK        
Sbjct: 843  GSWGGPPPPPPGNVRPSNSSWSSGPQPATP---KDEEPSGWEEPSPQSISRKM------- 892

Query: 229  PGGRDCSQAKQGSYDSLNSRVSHAESNTRRGRRAPPQPRAPAPPSASAAAASCPVPPN-G 405
                D   +  G  +S N +  +      +G  AP +P  P P ++ +A+ S  +    G
Sbjct: 893  --DIDDGTSAWGDPNSYNYKNVNLWDKNSQGGPAPREPNLPTPMTSKSASDSKSMQDGWG 950

Query: 406  GSPSPASSSSGGQASEEQD 462
             S  P + +      EE+D
Sbjct: 951  ESDGPVTGARHPSWEEEED 969

>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
           glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
           vegetative cell wall protein gp1 [Chlamydomonas
           reinhardtii]
          Length = 555

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 20/35 (57%), Positives = 22/35 (62%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSS 432
           APP P +PAPPS S  A   PVPP+   PSPA  S
Sbjct: 224 APPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPS 258

 Score = 40.0 bits (92), Expect = 0.018
 Identities = 17/32 (53%), Positives = 22/32 (68%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPA 423
           +PP P +PAPPS +  + S PVPP+   PSPA
Sbjct: 164 SPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPA 195

 Score = 39.3 bits (90), Expect = 0.030
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPA 423
           APP P  PAPPS S  + + P+PP+   PSP+
Sbjct: 125 APPSPSPPAPPSPSPPSPAPPLPPSPAPPSPS 156

 Score = 38.9 bits (89), Expect = 0.039
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPA 423
           APP P  P+PPS +  + S P PP+   PSPA
Sbjct: 112 APPSPAPPSPPSPAPPSPSPPAPPSPSPPSPA 143

 Score = 38.5 bits (88), Expect = 0.051
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSSS 435
           APP P +PAPPS +      P PP+  SP+P S  S
Sbjct: 195 APPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPS 230

 Score = 38.5 bits (88), Expect = 0.051
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPAS 426
           APP P  P PPS +  + + PVPP+   PSP S
Sbjct: 190 APPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPS 222

 Score = 38.1 bits (87), Expect = 0.067
 Identities = 16/35 (45%), Positives = 20/35 (56%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSS 432
           APP P  P PPS +  +   P PP+  SP+P S S
Sbjct: 203 APPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPS 237

 Score = 38.1 bits (87), Expect = 0.067
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPAS 426
           APP P +PAPPS S  A   P PP+   P P S
Sbjct: 117 APPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPS 149

 Score = 37.4 bits (85), Expect = 0.11
 Identities = 16/35 (45%), Positives = 21/35 (59%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSS 432
           +PP P  P+PPS +  + S P PP+   PSPA  S
Sbjct: 219 SPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPS 253

 Score = 37.4 bits (85), Expect = 0.11
 Identities = 15/31 (48%), Positives = 19/31 (60%)
 Frame = +1

Query: 331 PPQPRAPAPPSASAAAASCPVPPNGGSPSPA 423
           PP P  P PPS +  + + PVPP+   PSPA
Sbjct: 178 PPSPSPPVPPSPAPPSPAPPVPPSPAPPSPA 208

 Score = 37.0 bits (84), Expect = 0.15
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPAS 426
           APP P +PAPPS  + A   P PP   SP P S
Sbjct: 216 APPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPS 248

 Score = 36.6 bits (83), Expect = 0.19
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPAS 426
           APP P +PAPPS S      P PP   SP+P S
Sbjct: 143 APPLPPSPAPPSPSPPVPPSPSPPVPPSPAPPS 175

 Score = 36.2 bits (82), Expect = 0.25
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 328 APPQPR--APAPPSASAAAASCPVPPNGGSPSPASSS 432
           APP P   +PAPPS  + A   P PP+   PSPA  S
Sbjct: 64  APPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSPAPPS 100

 Score = 36.2 bits (82), Expect = 0.25
 Identities = 15/32 (46%), Positives = 17/32 (52%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPA 423
           APP P  P PPS S      P PP+   PSP+
Sbjct: 151 APPSPSPPVPPSPSPPVPPSPAPPSPTPPSPS 182

 Score = 36.2 bits (82), Expect = 0.25
 Identities = 18/35 (51%), Positives = 20/35 (56%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSS 432
           APP P +PAPPS    A   P PP+   PSPA  S
Sbjct: 74  APPSPPSPAPPSP---APPSPAPPSPAPPSPAPPS 105

 Score = 35.8 bits (81), Expect = 0.33
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPAS 426
           +PP P  P PPS +  + S PVPP+   P P S
Sbjct: 138 SPPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPS 170

 Score = 35.8 bits (81), Expect = 0.33
 Identities = 18/35 (51%), Positives = 20/35 (56%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSS 432
           APP P  P+P   S A  S P PP+ G PSPA  S
Sbjct: 44  APPSPAPPSPAPPSPAPPS-PAPPSPGPPSPAPPS 77

 Score = 35.0 bits (79), Expect = 0.57
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSSS 435
           APP P +PAPPS  + A   P  P   SPSP +  S
Sbjct: 208 APPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPS 243

 Score = 34.7 bits (78), Expect = 0.74
 Identities = 18/35 (51%), Positives = 20/35 (56%), Gaps = 2/35 (5%)
 Frame = +1

Query: 328 APPQPR--APAPPSASAAAASCPVPPNGGSPSPAS 426
           APP P   +PAPPS  + A   P PP   SPSP S
Sbjct: 107 APPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPS 141

 Score = 34.7 bits (78), Expect = 0.74
 Identities = 16/36 (44%), Positives = 21/36 (57%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSSS 435
           AP  P +PAPP+ S + +  P P    SPSP+ S S
Sbjct: 331 APSPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPS 366

 Score = 34.3 bits (77), Expect = 0.97
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 328 APPQPR--APAPPSASAAAASCPVPPNGGSPSPASSS 432
           APP P   +PAPPS +  +   P PP+   P+P S S
Sbjct: 102 APPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPS 138

 Score = 34.3 bits (77), Expect = 0.97
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPAS 426
           +PP P +PAPPS +      P PP+   P P S
Sbjct: 182 SPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPS 214

 Score = 34.3 bits (77), Expect = 0.97
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSS 432
           +PP P +P+PPS +      P PP+   P P S S
Sbjct: 130 SPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPS 164

 Score = 34.3 bits (77), Expect = 0.97
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 334 PQPRAPAPPSASAAAASCPVPPNGGSPSPASSS 432
           P P +PAPPS    + + P PP+   PSPA  S
Sbjct: 58  PAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPS 90

 Score = 33.9 bits (76), Expect = 1.3
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 334 PQPRAPAPPSASAAAASCPVPPNGGSPSPASSS 432
           P P +P PPS +  +   P PP+   PSPA  S
Sbjct: 63  PAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPS 95

 Score = 33.5 bits (75), Expect = 1.6
 Identities = 17/35 (48%), Positives = 20/35 (56%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSS 432
           APP P  P+P   S A  S P PP+  SP+P S S
Sbjct: 97  APPSPAPPSPAPPSPAPPS-PAPPSPPSPAPPSPS 130

 Score = 33.5 bits (75), Expect = 1.6
 Identities = 17/35 (48%), Positives = 19/35 (53%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSS 432
           APP P  P+P   S A  S P PP+   PSPA  S
Sbjct: 87  APPSPAPPSPAPPSPAPPS-PAPPSPAPPSPAPPS 120

 Score = 33.1 bits (74), Expect = 2.2
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPASSSS 435
           APP P AP+PP + A     P P    SPSP+ S S
Sbjct: 326 APPSP-APSPPPSPAPPTPSPSPSPSPSPSPSPSPS 360

 Score = 32.3 bits (72), Expect = 3.7
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 334 PQPRAPAPPSASAAAASCPVPPNGGSPSPASSSS 435
           P P +PAPPS + +    P PP   SPSP+ S S
Sbjct: 320 PVPPSPAPPSPAPSPPPSPAPPT-PSPSPSPSPS 352

 Score = 32.3 bits (72), Expect = 3.7
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPAS 426
           APP P  P+P   S A  S P PP+   PSP S
Sbjct: 92  APPSPAPPSPAPPSPAPPS-PAPPSPAPPSPPS 123

 Score = 32.3 bits (72), Expect = 3.7
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 334 PQPRAPAPPSASAAAASCPVPPNGGSPSPASSSS 435
           P P +PAPP   + A   P PP   SP+P S  S
Sbjct: 189 PAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPS 222

 Score = 32.0 bits (71), Expect = 4.8
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 328 APPQPRAPAPPS--ASAAAASCPVPPNGGSPSPASS 429
           APP P  P  PS  +    +  PVPP+   PSPA S
Sbjct: 298 APPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPS 333

 Score = 32.0 bits (71), Expect = 4.8
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 331 PPQPRAPAPPSASAAAASCPVPPNGG--SPSPASSS 432
           PP P  P PP+  + +   PVPP+     PSPA  S
Sbjct: 294 PPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPS 329

 Score = 31.6 bits (70), Expect(2) = 0.26
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 334 PQPRAPAPPSASAAAASCPVPPNGGSPSPASSS 432
           P P +P+PP+  + +   P PP   SP+P S S
Sbjct: 124 PAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPS 156

 Score = 31.6 bits (70), Expect = 6.3
 Identities = 16/35 (45%), Positives = 18/35 (50%)
 Frame = +1

Query: 334 PQPRAPAPPSASAAAASCPVPPNGGSPSPASSSSG 438
           P P +PAPPS        P PP+   PSPA  S G
Sbjct: 43  PAPPSPAPPS--------PAPPSPAPPSPAPPSPG 69

 Score = 31.2 bits (69), Expect = 8.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 328 APPQPRAPAPPSASAAAASCPVPPNGGSPSPAS 426
           APP P  P+P   S A  S P PP+   PSP S
Sbjct: 49  APPSPAPPSPAPPSPAPPS-PGPPSPAPPSPPS 80

 Score = 31.2 bits (69), Expect = 8.2
 Identities = 13/31 (41%), Positives = 15/31 (47%)
 Frame = +1

Query: 334 PQPRAPAPPSASAAAASCPVPPNGGSPSPAS 426
           P P +P PPS S      P PP+   P P S
Sbjct: 171 PAPPSPTPPSPSPPVPPSPAPPSPAPPVPPS 201

 Score = 31.2 bits (69), Expect(2) = 1.5
 Identities = 14/29 (48%), Positives = 16/29 (54%)
 Frame = +1

Query: 334 PQPRAPAPPSASAAAASCPVPPNGGSPSP 420
           P P +PAPP   + A   P PP   SPSP
Sbjct: 137 PSPPSPAPPLPPSPAPPSPSPPVPPSPSP 165

 Score = 23.5 bits (49), Expect(2) = 0.26
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 312 APGPTSAAPTSRPRPS 359
           +PGP S AP S P P+
Sbjct: 67  SPGPPSPAPPSPPSPA 82

 Score = 21.2 bits (43), Expect(2) = 1.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 312 APGPTSAAPTSRPRPS 359
           +P P S AP S P P+
Sbjct: 110 SPAPPSPAPPSPPSPA 125

>gb|AAA91850.1| paraneoplastic antigen
          Length = 535

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
 Frame = +1

Query: 175 GPGRWASLRKRTGKWLPFPGGRDCSQAKQGSYDSLNSRVSHAESNTRRGRRAPPQPRAPA 354
           G G W S R R G               + + D   +R      ++RR R  PPQP  P 
Sbjct: 5   GGGTWQSARPRVGS--------------RRAVDGEGARRGLCSPSSRRWRPGPPQPHCPG 50

Query: 355 P--PSASAAAASCPVPPNGGSPSPASSSSGGQASEE-----QDLSMDL 477
           P  P+ S AAA+    P G + S      G    EE     QDL  DL
Sbjct: 51  PRAPALSCAAAAPARRPRGHAESRRDGGLGSAEEEESWYDQQDLEQDL 98

>ref|NP_113896.1| adhesion regulating molecule 1; glycoprotein 110; cell membrane
           glycoprotein, 110000M(r) (surface antigen) [Rattus
           norvegicus] gi|20137195|sp|Q9JMB5|ADRM_RAT Adhesion
           regulating molecule 1 precursor (110 kDa cell membrane
           glycoprotein) (Gp110) gi|7339666|dbj|BAA92929.1| cell
           membrane glycoprotein 110000Mr (surface antigen) homolog
           [Rattus norvegicus]
          Length = 407

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 3/150 (2%)
 Frame = +1

Query: 52  PWP*SPASTSSNVQVQPSTWGSGALPSQMWGLKDTRFLGAFGP---GRWASLRKRTGKWL 222
           P P +  ++ S+     +  G G L S +  +  ++ +   GP   G    L   TG  L
Sbjct: 132 PMPGTLGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGLGGLGALTGPGL 191

Query: 223 PFPGGRDCSQAKQGSYDSLNSRVSHAESNTRRGRRAPPQPRAPAPPSASAAAASCPVPPN 402
               G     A   S  S +   +   S+T    RA P P APA   A++A +  P P +
Sbjct: 192 ASLLGSSGPPASSSSSSSRSQSAAVTPSSTTSSARATPAPSAPA---AASATSPSPAPSS 248

Query: 403 GGSPSPASSSSGGQASEEQDLSMDLDYMPV 492
           G   S A+S +  Q  +  DL   L  M V
Sbjct: 249 GNGTSTAASPT--QPIQLSDLQSILATMNV 276



EST assemble image


clone accession position
1 LCL039c03_r AV628259 1 515
2 HCL010g12_r AV640126 33 491
3 HCL087b02_r AV644363 38 362




Chlamydomonas reinhardtii
Kazusa DNA Research Institute