Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002267A_C01 KCC002267A_c01
(450 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC26442.1| unnamed protein product [Mus musculus] 34 0.52
gb|AAN10050.1| Y-box protein Ct-p50 [Chironomus tentans] 34 0.52
gb|AAN10049.1| Y-box protein Ct-p40 [Chironomus tentans] 33 0.88
sp|P21530|POLG_HCVB GENOME POLYPROTEIN gi|74504|pir||GNWVHB geno... 33 0.88
ref|ZP_00032712.1| COG0477: Permeases of the major facilitator s... 33 0.88
>dbj|BAC26442.1| unnamed protein product [Mus musculus]
Length = 450
Score = 33.9 bits (76), Expect = 0.52
Identities = 22/65 (33%), Positives = 28/65 (42%), Gaps = 2/65 (3%)
Frame = -2
Query: 449 EDANHLQ--CRSKGRSSQRRSGTAEVRRGGAQSAHGRRGPPGGAQIGRLVMSATRKRSNF 276
ED +H + C S+ R Q R T+ GG HG R P + R +R RS
Sbjct: 219 EDHHHKKRHCYSRERPKQDRHPTSSYCNGGQHLGHGDRASPERRSLSRYSHHHSRIRSGL 278
Query: 275 EADQS 261
E D S
Sbjct: 279 EQDWS 283
>gb|AAN10050.1| Y-box protein Ct-p50 [Chironomus tentans]
Length = 317
Score = 33.9 bits (76), Expect = 0.52
Identities = 17/39 (43%), Positives = 20/39 (50%)
Frame = -2
Query: 425 RSKGRSSQRRSGTAEVRRGGAQSAHGRRGPPGGAQIGRL 309
R GR RR G A RRGG + GPPGG + G +
Sbjct: 221 RGDGRPRNRRGGGAFRRRGGFRGGRRPGGPPGGPRGGNM 259
>gb|AAN10049.1| Y-box protein Ct-p40 [Chironomus tentans]
Length = 264
Score = 33.1 bits (74), Expect = 0.88
Identities = 17/37 (45%), Positives = 19/37 (50%)
Frame = -2
Query: 425 RSKGRSSQRRSGTAEVRRGGAQSAHGRRGPPGGAQIG 315
R GR RR G A RRGG + GPPGG + G
Sbjct: 221 RGDGRPRNRRGGGAFRRRGGFRGGRRPGGPPGGPRGG 257
>sp|P21530|POLG_HCVB GENOME POLYPROTEIN gi|74504|pir||GNWVHB genome polyprotein - hog
cholera virus (strain Brescia) gi|325461|gb|AAA43843.1|
hog cholera virus protein precursor
Length = 3898
Score = 33.1 bits (74), Expect = 0.88
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 278 FEADQSITLKCIQQHTHRGLCGAYLGRHVN 189
+E D S ++ +++HT G CGAYLG N
Sbjct: 2826 WEVDHSTLVRVLKRHTGAGYCGAYLGEKPN 2855
>ref|ZP_00032712.1| COG0477: Permeases of the major facilitator superfamily
[Burkholderia fungorum]
Length = 580
Score = 33.1 bits (74), Expect = 0.88
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Frame = -2
Query: 425 RSKGRSSQRRSGTAEVRRGGAQSAHGRRGPPGGAQIGRLVM----------SATRKRSNF 276
R +GR RR+G + G+++ R G P A R ++ +A+ R
Sbjct: 48 RGQGRPRDRRAGRRQCAAAGSRARRQRHGEPRTAHDCRQLVGAALRHERQGAASSARIER 107
Query: 275 EADQSITLKCIQQHTHRGLCG 213
ADQ +T C +Q RG+ G
Sbjct: 108 CADQRVTALCQRQTDPRGVAG 128
