Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002259A_C01 KCC002259A_c01
(268 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius] 54 6e-07
sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185)... 53 1e-06
ref|NP_896112.1| RNA-binding region RNP-1 (RNA recognition motif... 53 1e-06
prf||1604369A sulfated surface glycoprotein SSG185 53 1e-06
gb|AAH48087.1| Similar to hypothetical protein FLJ38426 [Mus mus... 52 2e-06
>emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 53.9 bits (128), Expect = 6e-07
Identities = 24/38 (63%), Positives = 27/38 (70%), Gaps = 1/38 (2%)
Frame = +3
Query: 156 GDWGGGGGGYRGRGGGYRGGNR-GGFSGGGGGRFYDNN 266
G +GGGGGGY G GGGY GG R GG+ GGGG R+ N
Sbjct: 124 GGYGGGGGGYGGGGGGYGGGRREGGYGGGGGDRYARGN 161
Score = 47.4 bits (111), Expect = 6e-05
Identities = 23/35 (65%), Positives = 25/35 (70%), Gaps = 1/35 (2%)
Frame = +3
Query: 147 RMEGDWG-GGGGGYRGRGGGYRGGNRGGFSGGGGG 248
R EG + GGGGGY G GGGY GG GG+ GGGGG
Sbjct: 106 RREGGYNRGGGGGYGGGGGGYGGGG-GGYGGGGGG 139
Score = 46.6 bits (109), Expect = 1e-04
Identities = 21/31 (67%), Positives = 24/31 (76%), Gaps = 1/31 (3%)
Frame = +3
Query: 165 GGGGGGYRGRGGGYRGGNR-GGFSGGGGGRF 254
GGGGGGYRG GGG GG R GG++ GGGG +
Sbjct: 89 GGGGGGYRGGGGGGYGGRREGGYNRGGGGGY 119
Score = 44.7 bits (104), Expect = 4e-04
Identities = 20/29 (68%), Positives = 21/29 (71%), Gaps = 1/29 (3%)
Frame = +3
Query: 165 GGGGGGYRG-RGGGYRGGNRGGFSGGGGG 248
GGGGGGY G R GGY G GG+ GGGGG
Sbjct: 97 GGGGGGYGGRREGGYNRGGGGGYGGGGGG 125
Score = 42.7 bits (99), Expect = 0.001
Identities = 22/32 (68%), Positives = 23/32 (71%)
Frame = +3
Query: 156 GDWGGGGGGYRGRGGGYRGGNRGGFSGGGGGR 251
G +GGGGGGY G GGGY GG GG G GGGR
Sbjct: 117 GGYGGGGGGYGGGGGGYGGG--GG--GYGGGR 144
Score = 34.3 bits (77), Expect = 0.52
Identities = 17/38 (44%), Positives = 21/38 (54%), Gaps = 2/38 (5%)
Frame = +3
Query: 156 GDWGGGGGGYRG--RGGGYRGGNRGGFSGGGGGRFYDN 263
G +GGGGGGY G R GGY GG ++ G + N
Sbjct: 131 GGYGGGGGGYGGGRREGGYGGGGGDRYARGNSDSDWRN 168
>sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185) gi|99441|pir||A33647
sulfated surface glycoprotein 185 - Volvox carteri
gi|1405821|emb|CAA35953.1| SULFATED SURFACE GLYCOPROTEIN
185 [Volvox carteri]
Length = 485
Score = 52.8 bits (125), Expect = 1e-06
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSPS 152
PPPPP PP PP PPP P PPPPPP SPS
Sbjct: 267 PPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPS 298
Score = 49.3 bits (116), Expect = 2e-05
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSPSILETGTRSGGGYNSPTRP 98
PPPPP PP PP PPP P PPPPPP P + R + P P
Sbjct: 263 PPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPRKPPSPSPPVPP 312
Score = 46.6 bits (109), Expect = 1e-04
Identities = 20/38 (52%), Positives = 21/38 (54%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSPSILETGT 134
PPPPP PP P PP P P PPPP PS+L T
Sbjct: 287 PPPPPPPPPSPSPPRKPPSPSPPVPPPPSPPSVLPAAT 324
Score = 46.6 bits (109), Expect = 1e-04
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = -1
Query: 244 PPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
PPPP PP PP PPP P PPPPPP P
Sbjct: 260 PPPPPPPPPPPPPPPPPSPPPPPPPPPPPP 289
Score = 45.8 bits (107), Expect = 2e-04
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
PPPPP PP PP PP P PPPPPP P
Sbjct: 260 PPPPPPPPPPPPPPPPPSPPPPPPPPPPPPP 290
Score = 44.3 bits (103), Expect = 5e-04
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -1
Query: 250 RPPPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
RPP PP P PP PPP P PPPPPP SP
Sbjct: 249 RPPSPPPPSPSPPP--PPPPPPPPPPPPPPSP 278
Score = 43.5 bits (101), Expect = 8e-04
Identities = 20/34 (58%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -1
Query: 247 PPPP---PLKPPRLPPR*PPPRPR*PPPPPPQSP 155
PPPP P PP PP PPP P PPPPPP P
Sbjct: 253 PPPPSPSPPPPPPPPPPPPPPPPPSPPPPPPPPP 286
Score = 42.7 bits (99), Expect = 0.001
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1
Query: 250 RPPPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
RPP PP P PP PPP P PPPPPP P
Sbjct: 240 RPPSPPPSPR--PPSPPPPSPSPPPPPPPPPP 269
Score = 41.6 bits (96), Expect = 0.003
Identities = 17/30 (56%), Positives = 18/30 (59%)
Frame = -1
Query: 244 PPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
PPP +PP PP P P P PPPPPP P
Sbjct: 244 PPPSPRPPSPPPPSPSPPPPPPPPPPPPPP 273
Score = 41.6 bits (96), Expect = 0.003
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSPS 152
P P P PP P PPP P PPPPPP PS
Sbjct: 246 PSPRPPSPPPPSPSPPPPPPPPPPPPPPPPPS 277
Score = 40.4 bits (93), Expect = 0.007
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
PPP P P PP PP P PPPPPP P
Sbjct: 244 PPPSPRPPSPPPPSPSPPPPPPPPPPPPPPP 274
Score = 35.0 bits (79), Expect = 0.30
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = -1
Query: 244 PPPPLKPPRLPPR*PPPRPR*PPPPPPQSPS 152
PP P P PPP PR PP PPP SPS
Sbjct: 230 PPSPQPTASSRPPSPPPSPR-PPSPPPPSPS 259
Score = 33.9 bits (76), Expect = 0.67
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
P P P R P P PRP PPPP P P
Sbjct: 231 PSPQPTASSRPPSPPPSPRPPSPPPPSPSPP 261
>ref|NP_896112.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp.
WH 8102] gi|33632076|emb|CAE06529.1| RNA-binding region
RNP-1 (RNA recognition motif) [Synechococcus sp. WH
8102]
Length = 214
Score = 52.8 bits (125), Expect = 1e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +3
Query: 156 GDWGGGGGGYRGRGGGYRGGNRGGFSGGGG 245
G +GGGGGGYRG GGGY GG GG GGGG
Sbjct: 114 GGYGGGGGGYRGGGGGYGGGGGGGRDGGGG 143
Score = 47.4 bits (111), Expect = 6e-05
Identities = 23/36 (63%), Positives = 25/36 (68%), Gaps = 5/36 (13%)
Frame = +3
Query: 156 GDWGGGGG-----GYRGRGGGYRGGNRGGFSGGGGG 248
G +GGGGG GY G GGGYRGG GG+ GGGGG
Sbjct: 102 GGYGGGGGRDGGGGYGGGGGGYRGGG-GGYGGGGGG 136
Score = 45.8 bits (107), Expect = 2e-04
Identities = 20/26 (76%), Positives = 21/26 (79%)
Frame = +3
Query: 168 GGGGGYRGRGGGYRGGNRGGFSGGGG 245
GGGGGYRG GGGY GG GG+ GGGG
Sbjct: 86 GGGGGYRGGGGGYGGG--GGYGGGGG 109
Score = 42.0 bits (97), Expect = 0.002
Identities = 21/35 (60%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Frame = +3
Query: 156 GDWGGGGGGYRGRGGGYRGG----NRGGFSGGGGG 248
G + GGGGGY G GGGY GG GG+ GGGGG
Sbjct: 89 GGYRGGGGGY-GGGGGYGGGGGRDGGGGYGGGGGG 122
Score = 42.0 bits (97), Expect = 0.002
Identities = 19/29 (65%), Positives = 21/29 (71%)
Frame = +3
Query: 156 GDWGGGGGGYRGRGGGYRGGNRGGFSGGG 242
G +GGGGGG R GGGY GG GG+ GGG
Sbjct: 128 GGYGGGGGGGRDGGGGY-GGGGGGYRGGG 155
Score = 41.6 bits (96), Expect = 0.003
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = +3
Query: 156 GDWGGGGGGYRGRGGGYRGGNRGGFSGGGGG 248
G G GGGG R GGGY GG GG+ GGGGG
Sbjct: 100 GGGGYGGGGGRDGGGGYGGGG-GGYRGGGGG 129
Score = 36.6 bits (83), Expect = 0.10
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 156 GDWGG--GGGGYRGRGGGYRGGNRGGFSGGGGGRFYDNN 266
G GG GGGGY G GGGYRGG G G + D +
Sbjct: 133 GGGGGRDGGGGYGGGGGGYRGGGDAGDRPSGARGWEDRS 171
Score = 35.8 bits (81), Expect = 0.18
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +3
Query: 174 GGGYRGRGGGYRGGNRGGFSGGGG 245
G RG GGGYRGG GG+ GGGG
Sbjct: 81 GSAPRGGGGGYRGGG-GGYGGGGG 103
Score = 33.9 bits (76), Expect = 0.67
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +3
Query: 165 GGGGGGYRGRGGGYRGGNRGGFSGGGGG 248
GGGG G G GGG R G GG+ GGGGG
Sbjct: 126 GGGGYG--GGGGGGRDGG-GGYGGGGGG 150
Score = 32.7 bits (73), Expect = 1.5
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 31/65 (47%)
Frame = +3
Query: 156 GDWGGGGGGYRGRG----------------------GGYRGGN---------RGGFSGGG 242
G +GGGGGGYRG G GG GG RG GGG
Sbjct: 142 GGYGGGGGGYRGGGDAGDRPSGARGWEDRSYGARDSGGEGGGGHDDGRSRRRRGSSGGGG 201
Query: 243 GGRFY 257
GG Y
Sbjct: 202 GGDDY 206
>prf||1604369A sulfated surface glycoprotein SSG185
Length = 453
Score = 52.8 bits (125), Expect = 1e-06
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSPS 152
PPPPP PP PP PPP P PPPPPP SPS
Sbjct: 267 PPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPS 298
Score = 49.3 bits (116), Expect = 2e-05
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSPSILETGTRSGGGYNSPTRP 98
PPPPP PP PP PPP P PPPPPP P + R + P P
Sbjct: 263 PPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPRKPPSPSPPVPP 312
Score = 49.3 bits (116), Expect = 2e-05
Identities = 20/31 (64%), Positives = 20/31 (64%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
PPPPP PP PP PPP P PPPPPP P
Sbjct: 264 PPPPPPPPPPPPPSPPPPPPPPPPPPPPPPP 294
Score = 46.6 bits (109), Expect = 1e-04
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = -1
Query: 244 PPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
PPPP PP PP PPP P PPPPPP P
Sbjct: 260 PPPPPPPPPPPPPPPPPSPPPPPPPPPPPP 289
Score = 45.8 bits (107), Expect = 2e-04
Identities = 19/31 (61%), Positives = 19/31 (61%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
PPPPP PP PP PP P PPPPPP P
Sbjct: 260 PPPPPPPPPPPPPPPPPSPPPPPPPPPPPPP 290
Score = 44.3 bits (103), Expect = 5e-04
Identities = 26/57 (45%), Positives = 27/57 (46%), Gaps = 15/57 (26%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPP---------------PPPQSPSILETGTRSGG 122
PPPPP PP PP PPP P PPP PPP SPS + T SGG
Sbjct: 271 PPPPPPSPPPPPPPPPPPPPPPPPPSPSPPRKPPSPSPPVPPPPSPSAV---TISGG 324
Score = 44.3 bits (103), Expect = 5e-04
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -1
Query: 250 RPPPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
RPP PP P PP PPP P PPPPPP SP
Sbjct: 249 RPPSPPPPSPSPPP--PPPPPPPPPPPPPPSP 278
Score = 43.5 bits (101), Expect = 8e-04
Identities = 20/34 (58%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -1
Query: 247 PPPP---PLKPPRLPPR*PPPRPR*PPPPPPQSP 155
PPPP P PP PP PPP P PPPPPP P
Sbjct: 253 PPPPSPSPPPPPPPPPPPPPPPPPSPPPPPPPPP 286
Score = 42.7 bits (99), Expect = 0.001
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1
Query: 250 RPPPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
RPP PP P PP PPP P PPPPPP P
Sbjct: 240 RPPSPPPSPR--PPSPPPPSPSPPPPPPPPPP 269
Score = 41.6 bits (96), Expect = 0.003
Identities = 17/30 (56%), Positives = 18/30 (59%)
Frame = -1
Query: 244 PPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
PPP +PP PP P P P PPPPPP P
Sbjct: 244 PPPSPRPPSPPPPSPSPPPPPPPPPPPPPP 273
Score = 41.6 bits (96), Expect = 0.003
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSPS 152
P P P PP P PPP P PPPPPP PS
Sbjct: 246 PSPRPPSPPPPSPSPPPPPPPPPPPPPPPPPS 277
Score = 40.4 bits (93), Expect = 0.007
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
PPP P P PP PP P PPPPPP P
Sbjct: 244 PPPSPRPPSPPPPSPSPPPPPPPPPPPPPPP 274
Score = 35.0 bits (79), Expect = 0.30
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = -1
Query: 244 PPPPLKPPRLPPR*PPPRPR*PPPPPPQSPS 152
PP P P PPP PR PP PPP SPS
Sbjct: 230 PPSPQPTASSRPPSPPPSPR-PPSPPPPSPS 259
Score = 33.9 bits (76), Expect = 0.67
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -1
Query: 247 PPPPPLKPPRLPPR*PPPRPR*PPPPPPQSP 155
P P P R P P PRP PPPP P P
Sbjct: 231 PSPQPTASSRPPSPPPSPRPPSPPPPSPSPP 261
>gb|AAH48087.1| Similar to hypothetical protein FLJ38426 [Mus musculus]
Length = 429
Score = 52.0 bits (123), Expect = 2e-06
Identities = 31/56 (55%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Frame = +3
Query: 99 GRVGEL*PPPDLVPV--SRMEGD----WGGGGGGYRGRGGGYRGGNRGGFSGGGGG 248
GR E+ PPP +P R EG WGGGGGG RG GGG RGG GG GGGG
Sbjct: 310 GRPNEIEPPPPEMPPWQKRQEGGGRGGWGGGGGG-RGGGGGGRGGWGGGGGWGGGG 364
Score = 39.7 bits (91), Expect = 0.012
Identities = 24/45 (53%), Positives = 25/45 (55%), Gaps = 11/45 (24%)
Frame = +3
Query: 156 GDWGGGGGGYRGRGG-------GYRG--GNRGGFSGGG--GGRFY 257
G WGG GGG GRGG G RG G RGG+ G G GGR Y
Sbjct: 368 GGWGGSGGGGGGRGGFQGRGDYGGRGDYGGRGGYGGRGGYGGRGY 412
Score = 36.2 bits (82), Expect = 0.14
Identities = 22/43 (51%), Positives = 23/43 (53%), Gaps = 9/43 (20%)
Frame = +3
Query: 156 GDWGGGG-----GGYRGRGG----GYRGGNRGGFSGGGGGRFY 257
GD+GG G GGY GRGG GY GG GGGG R Y
Sbjct: 387 GDYGGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGYRRY 429
Score = 36.2 bits (82), Expect = 0.14
Identities = 22/41 (53%), Positives = 23/41 (55%), Gaps = 9/41 (21%)
Frame = +3
Query: 156 GDWGGGGG-----GYRGRGGGYRGG--NRGGFSGGG--GGR 251
G WGGGGG G G GGG RGG RG + G G GGR
Sbjct: 358 GGWGGGGGSGGGWGGSGGGGGGRGGFQGRGDYGGRGDYGGR 398
