Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002257A_C01 KCC002257A_c01
(444 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00130356.1| COG1516: Flagellin-specific chaperone FliS [D... 42 0.001
ref|ZP_00007673.1| COG0068: Hydrogenase maturation factor [Rhodo... 42 0.002
ref|ZP_00141762.1| COG1011: Predicted hydrolase (HAD superfamily... 40 0.007
ref|ZP_00004310.1| COG1123: ATPase components of various ABC-typ... 40 0.009
ref|XP_197869.1| hypothetical protein XP_197869 [Mus musculus] 39 0.012
>ref|ZP_00130356.1| COG1516: Flagellin-specific chaperone FliS [Desulfovibrio
desulfuricans G20]
Length = 286
Score = 42.4 bits (98), Expect = 0.001
Identities = 33/84 (39%), Positives = 42/84 (49%), Gaps = 5/84 (5%)
Frame = -3
Query: 436 P*ASPRWWPAL---A*AR--GSGSTPRAAEPRLRSTSSLAPVTPPGGGWRPDMVHSPHRA 272
P A+P PAL A AR G+ +TP +A P+ + + AP PP G R S R
Sbjct: 149 PQAAPSGGPALGSGAAARRYGAQNTPASA-PQPAAQEAAAPAFPPAGPGRMAGFGSAARQ 207
Query: 271 APASPARLPTAAQTAGGPRALPSP 200
A+PA+ P A TA P A P P
Sbjct: 208 GYAAPAQAPAATHTAQQPAAAPGP 231
>ref|ZP_00007673.1| COG0068: Hydrogenase maturation factor [Rhodobacter sphaeroides]
Length = 1143
Score = 42.0 bits (97), Expect = 0.002
Identities = 33/84 (39%), Positives = 37/84 (43%), Gaps = 3/84 (3%)
Frame = +3
Query: 201 GDGRARGPPAVWAAVGRRAGLAGAAL*GECTISGRHPPPGGVTGASELVLRRRGSAARGV 380
GD R R A GR A G G C G P +GA+ R RGSAA G
Sbjct: 144 GDARGRLQLVQGAPSGRAADGDG----GACAAGGGGPSARARSGAAGRRARPRGSAAAGA 199
Query: 381 EP--DPRAQANAGHQR-GLAHGAD 443
P DP +A AGH+ G HG D
Sbjct: 200 RPDADPDGRAGAGHRSCGPLHGGD 223
>ref|ZP_00141762.1| COG1011: Predicted hydrolase (HAD superfamily) [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 379
Score = 40.0 bits (92), Expect = 0.007
Identities = 36/112 (32%), Positives = 46/112 (40%), Gaps = 2/112 (1%)
Frame = -3
Query: 430 ASPRWWPALA*ARGSGSTPRAA--EPRLRSTSSLAPVTPPGGGWRPDMVHSPHRAAPASP 257
A P+ P + AR PRAA + R SLA PG R VH P R AP +
Sbjct: 2 AGPQGRPGAS-ARQGQQGPRAAGRQGRAPGARSLAAAARPGRSGRRSGVHRPRRQAPDAT 60
Query: 256 ARLPTAAQTAGGPRALPSPVHKRVVP*LYKPSTCAVLEIYSLIRRERRTSAT 101
PTA+ PR P+P L +PS ++RR R + T
Sbjct: 61 GD-PTASAPGRRPRVGPAPAPAHAAAFLRQPSA-------GVVRRPARRAGT 104
>ref|ZP_00004310.1| COG1123: ATPase components of various ABC-type transport systems,
contain duplicated ATPase [Rhodobacter sphaeroides]
Length = 910
Score = 39.7 bits (91), Expect = 0.009
Identities = 31/82 (37%), Positives = 35/82 (41%), Gaps = 3/82 (3%)
Frame = +3
Query: 201 GDGRARGPPAVWAAVGRRAGLAGAAL*GECTISG---RHPPPGGVTGASELVLRRRGSAA 371
G G AR A+ + AG AGAA G G RHP P G A RG+
Sbjct: 134 GQGGARAAQALRGHHRQCAGRAGAAFGGAAPARGRQPRHPRPRGGNDALPAGRGGRGAVQ 193
Query: 372 RGVEPDPRAQANAGHQRGLAHG 437
RG P AG +RGL HG
Sbjct: 194 RGRHP-----CGAGRRRGLRHG 210
>ref|XP_197869.1| hypothetical protein XP_197869 [Mus musculus]
Length = 899
Score = 39.3 bits (90), Expect = 0.012
Identities = 24/71 (33%), Positives = 32/71 (44%), Gaps = 3/71 (4%)
Frame = -3
Query: 391 GSGSTPRAAEPRLRSTSSLAPV---TPPGGGWRPDMVHSPHRAAPASPARLPTAAQTAGG 221
G G+ P + P+ + T L P+ GG PD + P R A L +A GG
Sbjct: 84 GQGAQPGSRSPQPKETPPLRPIPTRAARGGAGAPDRIRPPRRPPTTRRAALLPSAAGEGG 143
Query: 220 PRALPSPVHKR 188
PR P PV +R
Sbjct: 144 PR--PGPVPRR 152
