Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002253A_C01 KCC002253A_c01
(552 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T07901 acyl CoA oxidase homolog - cucurbit gi|3115374|gb|AA... 48 8e-05
ref|NP_901194.1| probable methyl-accepting chemotaxis protein II... 42 0.006
ref|XP_310434.1| ENSANGP00000005649 [Anopheles gambiae] gi|21293... 42 0.006
emb|CAD18182.2| PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solana... 40 0.021
ref|XP_236380.2| similar to ring finger 111; arkadia [Rattus nor... 40 0.021
>pir||T07901 acyl CoA oxidase homolog - cucurbit gi|3115374|gb|AAC15870.1| acyl
CoA oxidase homolog [Cucurbita sp. cv. Kurokawa Amakuri]
Length = 690
Score = 48.1 bits (113), Expect = 8e-05
Identities = 34/114 (29%), Positives = 56/114 (48%), Gaps = 7/114 (6%)
Frame = +3
Query: 228 QLCAGSASALSLSVDSKQMREFMTHDNRQLRDAIFEFLKDDLYKPNLYQ----GMMEFRE 395
+ CA + + VD + +M +R++++ +FE+ +P L M + RE
Sbjct: 43 ETCAAGKAKAKIEVDMGSLSLYMRGKHREIQERVFEYFNS---RPELQTPVGISMADHRE 99
Query: 396 QTLQRLKKFV---GQRFFSVRDYNSDPRRFIAALECLMYADYSLAIKAGVHFTL 548
+++L V G R F R N DP ++ A +E + D SLAIK GV F+L
Sbjct: 100 LCMKQLVGLVREAGIRPF--RFVNEDPAKYFAIMEAVGSVDVSLAIKMGVQFSL 151
>ref|NP_901194.1| probable methyl-accepting chemotaxis protein II [Chromobacterium
violaceum ATCC 12472] gi|34330319|gb|AAQ59199.2|
probable methyl-accepting chemotaxis protein II
[Chromobacterium violaceum ATCC 12472]
Length = 371
Score = 42.0 bits (97), Expect = 0.006
Identities = 45/165 (27%), Positives = 69/165 (41%)
Frame = -2
Query: 515 AVVGVHEALQGSDEAPRVAVVVAHAEEALPHKLLEALQGLLAELHHALVQVGLVQVVLQE 336
A VG+ L G D P+ + EALP ++L GL LV +VL
Sbjct: 6 AAVGIVMWLSGIDALPKSPL----PREALPKLQAKSLAGL-----------SLVVLVLAL 50
Query: 335 LKDGVAELTVIMRHKFTHLLGVHAQAQRARGARAELASEHRHALRSHVRVRRHLYSATRS 156
D + F L A+A+RA A A + + H++R R + +T S
Sbjct: 51 AFDKAKSKS------FAKLETARAEAERAGEALARMMEQIGHSIRDASGASRQIADSTGS 104
Query: 155 PLKTVATPRAVNVQRERNTKKVTQQLTASTSLNAE*NNCAGIVGK 21
+T+A R +R + V QQ+ TS NAE + A ++ +
Sbjct: 105 MARTMAEQR----ERSEDMVVVAQQMAVVTSQNAEQSTAATLLAQ 145
>ref|XP_310434.1| ENSANGP00000005649 [Anopheles gambiae] gi|21293904|gb|EAA06049.1|
ENSANGP00000005649 [Anopheles gambiae str. PEST]
Length = 327
Score = 42.0 bits (97), Expect = 0.006
Identities = 40/138 (28%), Positives = 53/138 (37%), Gaps = 23/138 (16%)
Frame = +1
Query: 196 WLRSAWRCSLASSARAPRAR*A*AWTPSRCVNL*RMITVNSATPSLSS*RTTCTSPTCTR 375
W R+A R S +SARA RAR A AWT S + T + + T CT
Sbjct: 149 WARTARRTS--TSARAIRARTARAWTASATIRASATRASKGRTARRTLTSVSSTGRACTA 206
Query: 376 A*WSSASR-----------------------PCSASRSLWGSASSACATTTATRGASSLP 486
W +A+ PC AS + W ++SS + R SS P
Sbjct: 207 RAWMAATTTSATATGCGAARTARPTSNTLPAPCRASSAAWRTSSSTGSGCCRARSRSSPP 266
Query: 487 WSASCTPTTAWPSRRGCT 540
+ T T A P RR +
Sbjct: 267 CT---TSTRAAPGRRSAS 281
>emb|CAD18182.2| PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
Length = 1368
Score = 40.0 bits (92), Expect = 0.021
Identities = 31/94 (32%), Positives = 37/94 (38%), Gaps = 15/94 (15%)
Frame = +2
Query: 308 PSTPRRHL*VPEGRPVQAQPVPGH--------------DGVPRADPAAPQEVCGA-ALLQ 442
P++PRR V + +P Q QP PG VP AP + A A L
Sbjct: 968 PASPRRSAPVAQAQPEQRQPAPGRVPGEFDPSAARHALSDVPMLGGEAPADAPAAPAALA 1027
Query: 443 RARLQQRPAALHRCPGVPHVRRLQPGHQGGGALH 544
A Q RPA V RR+ G QG A H
Sbjct: 1028 DAVFQPRPAGDPHAEAVVQQRRMLVGSQGADATH 1061
>ref|XP_236380.2| similar to ring finger 111; arkadia [Rattus norvegicus]
Length = 956
Score = 40.0 bits (92), Expect = 0.021
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 335 VPEGRPVQAQPVPGHDGVPRADPAA----PQEVCGAALLQRARLQQRPAALHRCPGVPHV 502
+P+ P QP+ H +P P+A P EV +QR RL Q P H P PH
Sbjct: 690 IPQHLPPAHQPISHH--IPAPAPSAQRLHPHEVMQRMEVQRRRLMQHPTRAHERP-PPHP 746
Query: 503 RRLQPGHQGGGALH 544
R+ P + G +H
Sbjct: 747 HRMHPNYGHGHHIH 760
