Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002249A_C01 KCC002249A_c01
(532 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_889120.1| flagellar hook-length control protein [Bordetel... 40 0.019
ref|ZP_00088758.1| COG1766: Flagellar biosynthesis/type III secr... 39 0.032
ref|NP_883796.1| flagellar hook-length control protein [Bordetel... 39 0.055
ref|XP_310434.1| ENSANGP00000005649 [Anopheles gambiae] gi|21293... 37 0.12
ref|NP_076490.1| vesicle-associated calmodulin-binding protein [... 36 0.27
>ref|NP_889120.1| flagellar hook-length control protein [Bordetella bronchiseptica]
gi|33575996|emb|CAE33076.1| flagellar hook-length
control protein [Bordetella bronchiseptica]
Length = 447
Score = 40.0 bits (92), Expect = 0.019
Identities = 25/79 (31%), Positives = 38/79 (47%), Gaps = 2/79 (2%)
Frame = -3
Query: 338 GRTAHPSLRAASTSRRCDERPLLPPELPERRLLHAGANSAAAAAA--EPEPDSSSTPAAS 165
G+ A P+ AA+ + D P +PP LP+ A +A AA+A P +++ T A
Sbjct: 167 GQPAAPAAPAAAGAPPADTAPAMPPALPQTAQPAVAAQAAVAASAPNAPAAETAETAATP 226
Query: 164 PVAVDCVYALPWRWGPRRD 108
P A + LP G +D
Sbjct: 227 PAAPSLPHPLPSTGGTPQD 245
>ref|ZP_00088758.1| COG1766: Flagellar biosynthesis/type III secretory pathway
lipoprotein [Azotobacter vinelandii]
Length = 600
Score = 39.3 bits (90), Expect = 0.032
Identities = 36/103 (34%), Positives = 47/103 (44%), Gaps = 10/103 (9%)
Frame = +1
Query: 94 AYHNASRRGPQRHGSA*TQSTATGDAAGVLDESGSGSAAAAAAEFAPACSSRLSGSS--- 264
A N+ P A ++T TG+AAG G+G AAAAAAE AP SR + ++
Sbjct: 345 ALTNSPPNPPPPPAPAANETTQTGNAAGT---GGTGQAAAAAAEKAPTTLSRDNTTNYEV 401
Query: 265 -------GGRSGRSSQRLDVLAALKLGCAVRPGHLRREVLSPE 372
R G S QRL + A++ G RE LS E
Sbjct: 402 DHSVEHVQYRRG-SVQRLSAAVVVNYRDAIKDGQTSREPLSQE 443
>ref|NP_883796.1| flagellar hook-length control protein [Bordetella parapertussis]
gi|33573156|emb|CAE36807.1| flagellar hook-length
control protein [Bordetella parapertussis]
Length = 438
Score = 38.5 bits (88), Expect = 0.055
Identities = 40/144 (27%), Positives = 58/144 (39%), Gaps = 4/144 (2%)
Frame = -3
Query: 527 TSGPGMRCAGQAAPRARAPRLRASTCPAAAHAAAT*RLASR*MRSP*SHLFRSGDRTSRR 348
T+ A AA A AP L AA AAA + + + ++ +R+
Sbjct: 104 TAADAATLAALAAQTAPAPALPLQALEIAAEAAA--------VNAQVAAATQAAGAAARQ 155
Query: 347 K*PGRTA----HPSLRAASTSRRCDERPLLPPELPERRLLHAGANSAAAAAAEPEPDSSS 180
P A P+ AA+ + D P +PP LP+ A A AA AA+ P ++
Sbjct: 156 --PAHAALLAGQPAAPAAAGAPPADTAPAMPPALPQ-AAQPAVAAQAAVAASAPNAPAAE 212
Query: 179 TPAASPVAVDCVYALPWRWGPRRD 108
T A P A + LP G +D
Sbjct: 213 TAATPPAAPSLPHPLPSTGGTPQD 236
>ref|XP_310434.1| ENSANGP00000005649 [Anopheles gambiae] gi|21293904|gb|EAA06049.1|
ENSANGP00000005649 [Anopheles gambiae str. PEST]
Length = 327
Score = 37.4 bits (85), Expect = 0.12
Identities = 46/152 (30%), Positives = 60/152 (39%), Gaps = 19/152 (12%)
Frame = +3
Query: 123 PAPRERIDAVNSNRRRCWRARRVRFRLGSCSCSRVRTSMQ*PSLGEFRRQERPLVAASRR 302
PA R S R RAR R S + +R S S G R+ V+++ R
Sbjct: 146 PARWARTARRTSTSARAIRARTARAWTASAT---IRASATRASKGRTARRTLTSVSSTGR 202
Query: 303 ARCPQAWMRR-----------APRSLAP*SSIT*AKQMTSRTSHLS*RQTSSGGSVGCCR 449
A +AWM A R+ P S+ A S + +TSS GCCR
Sbjct: 203 ACTARAWMAATTTSATATGCGAARTARPTSNTLPAPCRASSAAW----RTSSSTGSGCCR 258
Query: 450 AS*RSQARSPCT--------RRCLTCTTHTRT 521
A RS++ PCT RR + T TRT
Sbjct: 259 A--RSRSSPPCTTSTRAAPGRRSASRTRATRT 288
>ref|NP_076490.1| vesicle-associated calmodulin-binding protein [Rattus norvegicus]
gi|2143639|pir||I56542 calmodulin-binding protein - rat
gi|349075|gb|AAA16633.1| calmodulin-binding protein
Length = 504
Score = 36.2 bits (82), Expect = 0.27
Identities = 23/66 (34%), Positives = 36/66 (53%)
Frame = +1
Query: 115 RGPQRHGSA*TQSTATGDAAGVLDESGSGSAAAAAAEFAPACSSRLSGSSGGRSGRSSQR 294
R P++ G+A T AT AAG G+ AAAA APA + + +GG +G +++
Sbjct: 327 RAPEQSGTAATSDAATPGAAG-------GAVAAAAGGAAPASGASATVGTGGDAGCAAKS 379
Query: 295 LDVLAA 312
D+ +A
Sbjct: 380 DDMASA 385
