KCC002243A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002243A_C01 KCC002243A_c01
cGCGCCTCAGGCGCGGGCGCTCCGACGCCCGTCGCCAGCTCTGGTGGCGCGCCGCCGGCC
TTCACTGGCCGCGGTGCTAGATCTATCAATCTCGACAGCGGCGCAGGCGGGGCCGCGACC
GGCGCCAGCAGCGCCATCGCGACTCCGGCCTCGCCCGACAACCTGCTGCCTATGAAGCTG
GGCTCGCTGCAAGAGTTCGCGACCCACGAGTGTGACACTAGTGAAATGGGTCCCGGCCGC
TTCAGCGTGCGCGACGTGCACCGCATCGGCATCTTTGACCTGCGGCTGTTCAACACCGAC
CGCCACGCCGGCAACATGCTGGTGCGCACGCCGCGCACCGCGTCCGCCTCCACCGCCGAC
CTTAAGTCGCGCATGACCGCGGACGCCCCGTACGAGCTTATTCCGATCGACCACGGCTTC
TGCCTGCCGGAGACGCTGGAGGCGCCGTACTTTGAGTGGCTGCACTGGCCGCAGACGATG
CTGCCGTTCAGCGAGGACGAGCTGCAGTACATTCGCGAGCTGGATGTGGAGCGCGACAAG
GCGATTCTCCGCCAGGAGCTGCCCATCCTGCGGCCCGAGTGCCTGCGCGTCCTGGAGGTC
TGCACTACGCTGCTGAAGACTTGCGCAGCCGCTGGCCTGACCCTATTCGATATTGCGAGC
GTCATGACCCGCCCCTTCGTCGATGCCGACGAGGAGCCTAGTGAGCTGGAGCGCATTTGC
CTCCGGGCACGCCAGTGCGTCGAGTACACCGCCCGGTGCGGCAACGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002243A_C01 KCC002243A_c01
         (767 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAE02809.1| OSJNBa0043A12.14 [Oryza sativa (japonica cultiva...   201  1e-50
pir||D84453 hypothetical protein At2g03890 [imported] - Arabidop...   197  2e-49
ref|NP_565307.1| phosphatidylinositol 3- and 4-kinase family [Ar...   197  2e-49
dbj|BAA89587.1| unnamed protein product [Oryza sativa (japonica ...   197  2e-49
ref|NP_563930.1| phosphatidylinositol 3- and 4-kinase family [Ar...   197  2e-49

>emb|CAE02809.1| OSJNBa0043A12.14 [Oryza sativa (japonica cultivar-group)]
          Length = 605

 Score =  201 bits (510), Expect = 1e-50
 Identities = 99/187 (52%), Positives = 125/187 (65%)
 Frame = +1

Query: 175 KLGSLQEFATHECDTSEMGPGRFSVRDVHRIGIFDLRLFNTDRHAGNMLVRTPRTASAST 354
           K+ S Q+F  H+ D S+ G   F V  VHRIGI D+R+FNTDRHAGN+LVR     +   
Sbjct: 263 KIASFQQFIAHDFDASDHGTSSFPVAAVHRIGILDIRIFNTDRHAGNVLVRKLDGGTGRF 322

Query: 355 ADLKSRMTADAPYELIPIDHGFCLPETLEAPYFEWLHWPQTMLPFSEDELQYIRELDVER 534
                        EL PIDHG CLPE LE PYFEW+HW Q+ +PFSE+EL+YI+ LD  R
Sbjct: 323 G---------CQTELFPIDHGLCLPENLEDPYFEWIHWAQSSIPFSEEELEYIKNLDPMR 373

Query: 535 DKAILRQELPILRPECLRVLEVCTTLLKTCAAAGLTLFDIASVMTRPFVDADEEPSELER 714
           D A+LR+ELPI+R  CLRVL +CT  LK  AA+GL L +I  +MTR F   +EEPS+LE 
Sbjct: 374 DVAMLRRELPIIREACLRVLVLCTIFLKEAAASGLCLAEIGEMMTREFRGLEEEPSKLEV 433

Query: 715 ICLRARQ 735
           +C+ AR+
Sbjct: 434 VCMEARR 440

>pir||D84453 hypothetical protein At2g03890 [imported] - Arabidopsis thaliana
          Length = 638

 Score =  197 bits (501), Expect = 2e-49
 Identities = 97/192 (50%), Positives = 125/192 (64%)
 Frame = +1

Query: 166 LPMKLGSLQEFATHECDTSEMGPGRFSVRDVHRIGIFDLRLFNTDRHAGNMLVRTPRTAS 345
           L  K+ S Q+F  H+ D S+ G   F V  VHRIGI D+R+FNTDRH GN+LV+      
Sbjct: 263 LVSKIASFQKFVAHDFDASDHGTSSFPVTSVHRIGILDIRIFNTDRHGGNLLVKK----- 317

Query: 346 ASTADLKSRMTADAPYELIPIDHGFCLPETLEAPYFEWLHWPQTMLPFSEDELQYIRELD 525
                    +      ELIPIDHG CLPETLE PYFEW+HWPQ  LPFS++E+ YI+ LD
Sbjct: 318 ------LDGVGMFGQVELIPIDHGLCLPETLEDPYFEWIHWPQASLPFSDEEVDYIQSLD 371

Query: 526 VERDKAILRQELPILRPECLRVLEVCTTLLKTCAAAGLTLFDIASVMTRPFVDADEEPSE 705
             +D  +LR+ELP++R  CLRVL +CT  LK  +A GL L +I  +MTR F   +EEPSE
Sbjct: 372 PVKDCDMLRRELPMIREACLRVLVLCTIFLKEASAYGLCLAEIGEMMTREFRPGEEEPSE 431

Query: 706 LERICLRARQCV 741
           LE +C+ A++ V
Sbjct: 432 LEVVCIEAKRSV 443

>ref|NP_565307.1| phosphatidylinositol 3- and 4-kinase family [Arabidopsis thaliana]
           gi|15810175|gb|AAL06989.1| At2g03890/T18C20.9
           [Arabidopsis thaliana] gi|20198186|gb|AAD24822.2|
           expressed protein [Arabidopsis thaliana]
           gi|27363386|gb|AAO11612.1| At2g03890/T18C20.9
           [Arabidopsis thaliana]
          Length = 650

 Score =  197 bits (501), Expect = 2e-49
 Identities = 97/192 (50%), Positives = 125/192 (64%)
 Frame = +1

Query: 166 LPMKLGSLQEFATHECDTSEMGPGRFSVRDVHRIGIFDLRLFNTDRHAGNMLVRTPRTAS 345
           L  K+ S Q+F  H+ D S+ G   F V  VHRIGI D+R+FNTDRH GN+LV+      
Sbjct: 275 LVSKIASFQKFVAHDFDASDHGTSSFPVTSVHRIGILDIRIFNTDRHGGNLLVKK----- 329

Query: 346 ASTADLKSRMTADAPYELIPIDHGFCLPETLEAPYFEWLHWPQTMLPFSEDELQYIRELD 525
                    +      ELIPIDHG CLPETLE PYFEW+HWPQ  LPFS++E+ YI+ LD
Sbjct: 330 ------LDGVGMFGQVELIPIDHGLCLPETLEDPYFEWIHWPQASLPFSDEEVDYIQSLD 383

Query: 526 VERDKAILRQELPILRPECLRVLEVCTTLLKTCAAAGLTLFDIASVMTRPFVDADEEPSE 705
             +D  +LR+ELP++R  CLRVL +CT  LK  +A GL L +I  +MTR F   +EEPSE
Sbjct: 384 PVKDCDMLRRELPMIREACLRVLVLCTIFLKEASAYGLCLAEIGEMMTREFRPGEEEPSE 443

Query: 706 LERICLRARQCV 741
           LE +C+ A++ V
Sbjct: 444 LEVVCIEAKRSV 455

>dbj|BAA89587.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
           gi|6815082|dbj|BAA90368.1| unnamed protein product
           [Oryza sativa (japonica cultivar-group)]
          Length = 492

 Score =  197 bits (501), Expect = 2e-49
 Identities = 112/247 (45%), Positives = 140/247 (56%)
 Frame = +1

Query: 13  AGAPTPVASSGGAPPAFTGRGARSINLDSGAGGAATGASSAIATPASPDNLLPMKLGSLQ 192
           A +P+     G A  A     A  +    G       A   I+ PA     +P    S+Q
Sbjct: 150 ASSPSHGGGGGYASKAVLREVAAFLLDHDGFARVEPTALIKISRPA-----MPTTTASIQ 204

Query: 193 EFATHECDTSEMGPGRFSVRDVHRIGIFDLRLFNTDRHAGNMLVRTPRTASASTADLKSR 372
            FA HECD  E+GP RFSV  VHRIG  D+RL N DRHAGN+LV+  ++  +  A   S 
Sbjct: 205 RFAAHECDAGELGPSRFSVASVHRIGSLDVRLLNIDRHAGNILVK--KSPESECASGGST 262

Query: 373 MTADAPYELIPIDHGFCLPETLEAPYFEWLHWPQTMLPFSEDELQYIRELDVERDKAILR 552
           +T   P +L+PIDHG CLPE L+ PYFEWLHWPQ+ LPFS  EL+Y+  LD  RD A+LR
Sbjct: 263 LT---PLDLVPIDHGLCLPEQLDDPYFEWLHWPQSSLPFSGAELEYVASLDPFRDAAMLR 319

Query: 553 QELPILRPECLRVLEVCTTLLKTCAAAGLTLFDIASVMTRPFVDADEEPSELERICLRAR 732
            ELP L    +R+L +CT  L+  AAAGL L DI  +MTR F   +E  S LE +C  A 
Sbjct: 320 AELPSLTEAAIRILTLCTIFLQRAAAAGLCLADIGDMMTREFSAMEEGLSALESLCKNAY 379

Query: 733 QCVEYTA 753
                TA
Sbjct: 380 DSSTTTA 386

>ref|NP_563930.1| phosphatidylinositol 3- and 4-kinase family [Arabidopsis thaliana]
           gi|16974596|gb|AAL31202.1| At1g13640/F21F23_7
           [Arabidopsis thaliana] gi|23506173|gb|AAN31098.1|
           At1g13640/F21F23_7 [Arabidopsis thaliana]
          Length = 622

 Score =  197 bits (500), Expect = 2e-49
 Identities = 96/191 (50%), Positives = 122/191 (63%)
 Frame = +1

Query: 163 LLPMKLGSLQEFATHECDTSEMGPGRFSVRDVHRIGIFDLRLFNTDRHAGNMLVRTPRTA 342
           L+  K+ S Q+F  H+ D S+ G   F V  VHRIGI D+R+ NTDRH GN+LV+     
Sbjct: 268 LVSSKIASFQKFVPHDFDASDHGTSSFPVASVHRIGILDIRILNTDRHGGNLLVKKLDDG 327

Query: 343 SASTADLKSRMTADAPYELIPIDHGFCLPETLEAPYFEWLHWPQTMLPFSEDELQYIREL 522
                            ELIPIDHG CLPETLE PYFEW+HWPQ  +PFSE+EL YI+ L
Sbjct: 328 GVGRF---------GQVELIPIDHGLCLPETLEDPYFEWIHWPQASIPFSEEELDYIQSL 378

Query: 523 DVERDKAILRQELPILRPECLRVLEVCTTLLKTCAAAGLTLFDIASVMTRPFVDADEEPS 702
           D  +D  +LR+ELP++R  CLRVL +CT  LK  A  GL L +I  +MTR F   +EEPS
Sbjct: 379 DPVKDCEMLRRELPMIREACLRVLVLCTVFLKEAAVFGLCLAEIGEMMTREFRAGEEEPS 438

Query: 703 ELERICLRARQ 735
           ELE +C+ A++
Sbjct: 439 ELEMLCIEAKR 449



EST assemble image


clone accession position
1 LCL048g05_r AV628904 1 229
2 MXL047f12_r BP095808 2 386
3 HCL007c12_r AV639927 236 741
4 MXL100h05_r BP098889 507 767




Chlamydomonas reinhardtii
Kazusa DNA Research Institute